prot_A-nodosum_M_contig972.29.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig972.29.1
Unique Nameprot_A-nodosum_M_contig972.29.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length86
Homology
BLAST of mRNA_A-nodosum_M_contig972.29.1 vs. uniprot
Match: A0A6H5KLE3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLE3_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.080e-9
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   14 QPRLIMPLSVEPSKPRLIYDARRLNAACRHVRFTLDSVGSLAALGWEGAIKV 65
            +P L++PL VEP KPRLI+DAR LN  C H  F++D VG +A   W+GA +V
Sbjct:  110 KPHLVLPLGVEPKKPRLIWDARWLNLMCLHSPFSMDGVGKVAQCAWQGAHQV 161          
BLAST of mRNA_A-nodosum_M_contig972.29.1 vs. uniprot
Match: A0A6H5KRN9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN9_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 1.100e-9
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    3 FEEVRTSDGPSQPRLIMPLSVEPSKPRLIYDARRLNAACRHVRFTLDSVGSLAALGWEG 61
            + +V++S GP +PR+IM LSVE SKPRLIYDAR LN+  R + F +D+V  +A++   G
Sbjct:  185 WADVKSSTGPVRPRMIMALSVETSKPRLIYDARPLNSCTRKIPFAMDTVARVASVASSG 243          
BLAST of mRNA_A-nodosum_M_contig972.29.1 vs. uniprot
Match: A0A6H5JIS8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS8_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 1.060e-6
Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    3 FEEVRTSDGPSQPRLIMPLSVEPSKPRLIYDARRLNAACRHVRFTLDSVGSLA 55
            + +V+   GP +PRLIM LSVE +KPRLIYDAR LN   + + F++D+V  +A
Sbjct:   91 WSDVKGPAGPVRPRLIMALSVEETKPRLIYDARPLNQFFKRMPFSMDTVARVA 143          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig972.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLE3_9PHAE1.080e-953.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRN9_9PHAE1.100e-950.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIS8_9PHAE1.060e-650.94Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig972contigA-nodosum_M_contig972:211038..211295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig972.29.1mRNA_A-nodosum_M_contig972.29.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig972 211036..211295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig972.29.1 ID=prot_A-nodosum_M_contig972.29.1|Name=mRNA_A-nodosum_M_contig972.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=86bp
VPFEEVRTSDGPSQPRLIMPLSVEPSKPRLIYDARRLNAACRHVRFTLDS
VGSLAALGWEGAIKVHSMISQVSIMSFYTQHRGLCL
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