prot_A-nodosum_M_contig969.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig969.16.1
Unique Nameprot_A-nodosum_M_contig969.16.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length147
Homology
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BLAST of mRNA_A-nodosum_M_contig969.16.1 vs. uniprot
Match: D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.220e-14
Identity = 53/132 (40.15%), Postives = 68/132 (51.52%), Query Frame = 0 
Query:   22 ASACSC--------EAGRGLCDFYEDASVVVRGTVLSRADGSSINDYATYTINSATTYKAEPDVVYAQVISFVTGGNSAACGVTLTIGEEYLFPLFRISN----SFEPEVDGDLSANLCSPPQVWSSVDQTE 141
            ASAC+C        E  +G+   +   +VV RGT LS++  + IN+  T+T+     Y    DV     ISFVTGGNSA CGV LTIGEEYL  L+   +    S      G L+  LC   +VWS V   E
Sbjct:   26 ASACTCLAQYITPCEYAQGI---FTTTTVVFRGTALSKSAQTDINEDVTFTVQVNAVYSG--DVDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLTVGLCDLARVWSDVPDDE 152
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig969.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCN7_ECTSI1.220e-1440.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001820Protease inhibitor I35 (TIMP)PFAMPF00965TIMPcoord: 24..141
e-value: 4.1E-7
score: 30.0
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldGENE3D2.40.50.120coord: 25..146
e-value: 6.5E-14
score: 53.8
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 25..141
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..25
score: 6.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig969contigA-nodosum_M_contig969:269116..270971 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig969.16.1mRNA_A-nodosum_M_contig969.16.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig969 267948..271457 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig969.16.1 ID=prot_A-nodosum_M_contig969.16.1|Name=mRNA_A-nodosum_M_contig969.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=147bp
MAFRRLILVAIALVSTMFLHTASACSCEAGRGLCDFYEDASVVVRGTVLS
RADGSSINDYATYTINSATTYKAEPDVVYAQVISFVTGGNSAACGVTLTI
GEEYLFPLFRISNSFEPEVDGDLSANLCSPPQVWSSVDQTELNGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001820TIMP
IPR008993TIMP-like_OB-fold