prot_A-nodosum_M_contig966.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig966.3.1
Unique Nameprot_A-nodosum_M_contig966.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length87
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig966.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025875Leucine rich repeat 4PFAMPF12799LRR_4coord: 11..50
e-value: 2.1E-6
score: 28.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..87
e-value: 8.0E-28
score: 98.9
NoneNo IPR availablePANTHERPTHR27001:SF865RECEPTOR-LIKE PROTEIN 12coord: 29..87
coord: 2..51
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..87
IPR045271Receptor-like protein kinase SRF-likePANTHERPTHR27001OS01G0253100 PROTEINcoord: 29..87
IPR045271Receptor-like protein kinase SRF-likePANTHERPTHR27001OS01G0253100 PROTEINcoord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig966contigA-nodosum_M_contig966:98593..103261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig966.3.1mRNA_A-nodosum_M_contig966.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig966 98591..103261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig966.3.1 ID=prot_A-nodosum_M_contig966.3.1|Name=mRNA_A-nodosum_M_contig966.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=87bp
PIPRELGNPTALQHIFLSGNKLTGSIPSELGNLTALQKLILHDNELTGSI
PRELGRMTVLDSLKLYRNELTGPLPRELGNLNALQHL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025875Leu-rich_rpt_4
IPR032675LRR_dom_sf
IPR045271SRF-like