prot_A-nodosum_M_contig96.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.4.1
Unique Nameprot_A-nodosum_M_contig96.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length118
Homology
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: D7FWG4_ECTSI (Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG4_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 9.560e-60
Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 0
Query:    1 MGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            M LKMGKGK          +VAQCCHATLG+YR+ ER+CPSA+RGWE+MGQAKICVK PTE EL+DIQAKAQ+AG++NYLVMDAGHTQIA GSRT LALGPAPVWAFEGISSHLKLM
Sbjct:   56 MQLKMGKGK----------VVAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQSAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A7S3MCE7_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 8.220e-40
Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 0
Query:    3 LKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            L MGKGK          + AQCCHATLG+Y++  +YC +A+  WE+ GQAK+ VK  TEAE+ D+QAKA AAG++ Y V D G TQIA GSRT LA+GPAP +AF+G++SHLKL+
Sbjct:   83 LSMGKGK----------VAAQCCHATLGAYKIAIKYCQTAVENWEDDGQAKVAVKVDTEAEMADLQAKAMAAGLVTYFVQDEGRTQIAAGSRTVLAIGPAPAYAFQGLTSHLKLL 187          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A836C8I9_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I9_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.450e-37
Identity = 63/115 (54.78%), Postives = 80/115 (69.57%), Query Frame = 0
Query:    3 LKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            LKMGKGK          + AQCCHATLG Y+   R+ P+ ++ WE + QAKICVK P E+E++ I+ KA+AAG++ Y+V DAG TQI  GSRT L +GPAP  AF GI+ HLKLM
Sbjct:   96 LKMGKGK----------VAAQCCHATLGCYKTARRHAPNCVKSWEYLAQAKICVKCPEESEMWQIREKAEAAGLVTYMVADAGRTQIPSGSRTVLGIGPAPETAFLGITDHLKLM 200          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: L1JZ89_GUITC (Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JZ89_GUITC)

HSP 1 Score: 130 bits (327), Expect = 5.500e-37
Identity = 65/115 (56.52%), Postives = 81/115 (70.43%), Query Frame = 0
Query:    3 LKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            LKMGKGK          I AQC HA LG+Y+  ++Y PSA+  WE  GQAKICV+ PTE E+++I  KA A G+I Y+VMDAG TQIA GSRT LA+GPAP   F+G++ HLKL+
Sbjct:    8 LKMGKGK----------IAAQCGHAVLGAYKRGKKYAPSALTWWEKFGQAKICVQCPTEDEMWEIAKKAGAKGLITYIVMDAGRTQIAAGSRTVLAIGPAPEQQFKGLTDHLKLL 112          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A6T8BEQ0_9CRYP (Aminoacyl-tRNA hydrolase n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A6T8BEQ0_9CRYP)

HSP 1 Score: 127 bits (318), Expect = 9.830e-36
Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 0
Query:    5 MGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            MGKGK          I AQC HA LG+Y+ C R  PSA++ WE +GQAKIC++ PTE+E+ DI++KA+  G++ Y V DAG TQIA GSRT LA+GPAP  +F G++ HLKL+
Sbjct:    1 MGKGK----------IAAQCGHAVLGAYKRCMRSAPSALQTWERLGQAKICLQGPTESEMEDIESKAKGRGLVTYFVTDAGRTQIAAGSRTVLAIGPAPDSSFVGLTDHLKLL 103          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A484E2I8_BRELC (Aminoacyl-tRNA hydrolase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2I8_BRELC)

HSP 1 Score: 127 bits (318), Expect = 1.250e-34
Identity = 61/115 (53.04%), Postives = 80/115 (69.57%), Query Frame = 0
Query:    3 LKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            LKMGKGK          I AQCCHATLG+Y+   +  P AIR WE +GQAK+C+K  +EAEL  +  KA   G++NY+V+DAG TQIAP S+T L++GPAP+ A + ++ HLKLM
Sbjct:   86 LKMGKGK----------IAAQCCHATLGAYKRALKRAPDAIRSWETLGQAKVCLKIDSEAELMALAEKAAEHGLVNYVVIDAGRTQIAPDSKTVLSIGPAPLKAIDEVTGHLKLM 190          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: K3WU49_GLOUD (Aminoacyl-tRNA hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU49_GLOUD)

HSP 1 Score: 127 bits (318), Expect = 1.740e-34
Identity = 61/115 (53.04%), Postives = 78/115 (67.83%), Query Frame = 0
Query:    3 LKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            LKMGKGK          I AQCCHATLG+Y+   +  P A+R WE +GQAK+C+K  +E EL  + AKA   G+INY+V+DAG TQIAP S+T L +GPAP+ A   ++ HLKLM
Sbjct:   98 LKMGKGK----------IAAQCCHATLGAYKRAVKRAPKAVRAWEMLGQAKVCLKVDSEEELLSLAAKASEHGLINYVVVDAGRTQIAPDSKTVLGIGPAPIDAINKVTGHLKLM 202          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A0P1AIZ9_PLAHL (Aminoacyl-tRNA hydrolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIZ9_PLAHL)

HSP 1 Score: 125 bits (314), Expect = 5.030e-34
Identity = 59/115 (51.30%), Postives = 80/115 (69.57%), Query Frame = 0
Query:    3 LKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            LKMGKGK          I AQCCHATLG+Y+L  +  P A+RGWE +GQAK+C+K  +E EL  +  KA   G+++Y+V+DAG TQIAP S+T L++GPAP+   + ++ HLKLM
Sbjct:   86 LKMGKGK----------IAAQCCHATLGAYKLALKRTPDAVRGWEMLGQAKVCLKVESEEELLALADKASECGLVSYVVVDAGRTQIAPDSKTVLSIGPAPLKVIDEVTGHLKLM 190          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A3M6VQY9_9STRA (Aminoacyl-tRNA hydrolase n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY9_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.590e-33
Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 0
Query:    3 LKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 117
            LKMGKGK          I AQCCHATLG+Y+   +  P AIR WE +GQAK+C+K  +E E+  +  KA   G+++Y+V+DAG TQIAP S+T L++GPAPV A + IS HLKLM
Sbjct:   90 LKMGKGK----------IAAQCCHATLGAYKRALKRTPDAIRAWEMLGQAKVCLKVDSEEEMLALAEKAAEHGLVHYIVIDAGRTQIAPDSKTVLSIGPAPVKAIDEISGHLKLM 194          
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: F0Y309_AURAN (Aminoacyl-tRNA hydrolase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y309_AURAN)

HSP 1 Score: 122 bits (305), Expect = 1.690e-33
Identity = 59/116 (50.86%), Postives = 78/116 (67.24%), Query Frame = 0
Query:    1 MGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKL 116
            M LK   GK+   +  P  + AQCCHA LG+Y+   R  P+A++ W   GQAK+CVK P E EL ++QA   AAG+++YLV DAG TQ+APGS+T LA+GPAPV   +  + HLKL
Sbjct:    9 MDLKDEAGKST--KMKPGKVAAQCCHAVLGAYKRGARKAPAAVKWWSMTGQAKVCVKVPKEEELLELQATLAAAGVVSYLVEDAGRTQVAPGSKTVLAVGPAPVKVLDQFTKHLKL 122          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWG4_ECTSI9.560e-6077.78Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus silicu... [more]
A0A7S3MCE7_9STRA8.220e-4056.52Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata... [more]
A0A836C8I9_9STRA4.450e-3754.78Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus T... [more]
L1JZ89_GUITC5.500e-3756.52Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guilla... [more]
A0A6T8BEQ0_9CRYP9.830e-3653.98Aminoacyl-tRNA hydrolase n=1 Tax=Cryptomonas curva... [more]
A0A484E2I8_BRELC1.250e-3453.04Aminoacyl-tRNA hydrolase n=1 Tax=Bremia lactucae T... [more]
K3WU49_GLOUD1.740e-3453.04Aminoacyl-tRNA hydrolase n=1 Tax=Globisporangium u... [more]
A0A0P1AIZ9_PLAHL5.030e-3451.30Aminoacyl-tRNA hydrolase n=1 Tax=Plasmopara halste... [more]
A0A3M6VQY9_9STRA1.590e-3353.04Aminoacyl-tRNA hydrolase n=2 Tax=Peronospora effus... [more]
F0Y309_AURAN1.690e-3350.86Aminoacyl-tRNA hydrolase (Fragment) n=1 Tax=Aureoc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 20..117
e-value: 9.3E-29
score: 100.1
IPR002833Peptidyl-tRNA hydrolase, PTH2TIGRFAMTIGR00283TIGR00283coord: 4..117
e-value: 1.9E-29
score: 100.3
IPR002833Peptidyl-tRNA hydrolase, PTH2PANTHERPTHR12649PEPTIDYL-TRNA HYDROLASE 2coord: 3..117
IPR023476Peptidyl-tRNA hydrolase II domain superfamilyGENE3D3.40.1490.10Bit1coord: 1..117
e-value: 3.4E-29
score: 103.1
IPR023476Peptidyl-tRNA hydrolase II domain superfamilySUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 3..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:115029..116362 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.4.1mRNA_A-nodosum_M_contig96.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 114394..116461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.4.1 ID=prot_A-nodosum_M_contig96.4.1|Name=mRNA_A-nodosum_M_contig96.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=118bp
MGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMG
QAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALG
PAPVWAFEGISSHLKLM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002833PTH2
IPR023476Pep_tRNA_hydro_II_dom_sf