mRNA_A-nodosum_M_contig96.4.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: D7FWG4_ECTSI (Aminoacyl-tRNA hydrolase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWG4_ECTSI) HSP 1 Score: 241 bits (616), Expect = 2.020e-76 Identity = 117/150 (78.00%), Postives = 131/150 (87.33%), Query Frame = 1
Query: 1 EEFEEEERALQTGGGARSWSSETGPFKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
EEFEEEERALQ+ GGAR+WS + GPFKLVL+VNM LKMGKGK +VAQCCHATLG+YR+ ER+CPSA+RGWE+MGQAKICVK PTE EL+DIQAKAQ+AG++NYLVMDAGHTQIA GSRT LALGPAPVWAFEGISSHLKLM
Sbjct: 23 EEFEEEERALQSNGGARAWSLDDGPFKLVLIVNMQLKMGKGK----------VVAQCCHATLGNYRISERHCPSALRGWEHMGQAKICVKCPTETELYDIQAKAQSAGLVNYLVMDAGHTQIAAGSRTVLALGPAPVWAFEGISSHLKLM 162
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A7S3MCE7_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE7_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.170e-44 Identity = 75/133 (56.39%), Postives = 97/133 (72.93%), Query Frame = 1
Query: 52 SWSSETGPFKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
S++ E GPFKL+L VN L MGKGK + AQCCHATLG+Y++ +YC +A+ WE+ GQAK+ VK TEAE+ D+QAKA AAG++ Y V D G TQIA GSRT LA+GPAP +AF+G++SHLKL+
Sbjct: 65 SYTEEDGPFKLILCVNNSLSMGKGK----------VAAQCCHATLGAYKIAIKYCQTAVENWEDDGQAKVAVKVDTEAEMADLQAKAMAAGLVTYFVQDEGRTQIAAGSRTVLAIGPAPAYAFQGLTSHLKLL 187
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A836C8I9_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I9_9STRA) HSP 1 Score: 157 bits (398), Expect = 3.510e-43 Identity = 75/134 (55.97%), Postives = 94/134 (70.15%), Query Frame = 1
Query: 49 RSWSSETGPFKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
R W+ + GPFKLVLVVN LKMGKGK + AQCCHATLG Y+ R+ P+ ++ WE + QAKICVK P E+E++ I+ KA+AAG++ Y+V DAG TQI GSRT L +GPAP AF GI+ HLKLM
Sbjct: 77 RDWTIDDGPFKLVLVVNSELKMGKGK----------VAAQCCHATLGCYKTARRHAPNCVKSWEYLAQAKICVKCPEESEMWQIREKAEAAGLVTYMVADAGRTQIPSGSRTVLGIGPAPETAFLGITDHLKLM 200
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A7S0XWF5_HEMAN (Aminoacyl-tRNA hydrolase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XWF5_HEMAN) HSP 1 Score: 143 bits (360), Expect = 1.870e-38 Identity = 75/138 (54.35%), Postives = 91/138 (65.94%), Query Frame = 1
Query: 37 GGGARSWSSETGPFKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
GG SWS GP K+VLVVN LKMGKGK I AQC HATLG+Y+ P +R WE +GQAKICV+ PTEAE+ ++ KA+A G+I Y V DAG TQI GSRT LA+GPAP AF+G++ H KL+
Sbjct: 7 GGTQGSWSVVDGPGKMVLVVNQELKMGKGK----------IAAQCGHATLGAYKKAS---PQVLRMWEGLGQAKICVQCPTEAEMHEVADKARAKGLITYQVTDAGRTQIPAGSRTVLAIGPAPESAFKGVTDHFKLL 131
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A7S4K0G8_9STRA (Aminoacyl-tRNA hydrolase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K0G8_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.970e-37 Identity = 73/135 (54.07%), Postives = 83/135 (61.48%), Query Frame = 1
Query: 46 ARSWSSETGPFKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
AR W P+K+VL VN LKMGKGK I AQCCHA +G Y+ + CP +R WE G AKI VK P + E+ I A GI YLV DAG TQIA GSRT L LGPAPV AFEG++SHLKLM
Sbjct: 71 ARLWGMNNAPYKMVLCVNQDLKMGKGK----------IAAQCCHAAVGCYKRARKVCPDGVRAWEQTGCAKIAVKCPNQDEIEVILVAAHKRGIPLYLVADAGRTQIAAGSRTVLGLGPAPVSAFEGVTSHLKLM 195
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: L1JZ89_GUITC (Aminoacyl-tRNA hydrolase (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JZ89_GUITC) HSP 1 Score: 138 bits (347), Expect = 8.820e-37 Identity = 70/122 (57.38%), Postives = 86/122 (70.49%), Query Frame = 1
Query: 85 VLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
VLVVN LKMGKGK I AQC HA LG+Y+ ++Y PSA+ WE GQAKICV+ PTE E+++I KA A G+I Y+VMDAG TQIA GSRT LA+GPAP F+G++ HLKL+
Sbjct: 1 VLVVNQELKMGKGK----------IAAQCGHAVLGAYKRGKKYAPSALTWWEKFGQAKICVQCPTEDEMWEIAKKAGAKGLITYIVMDAGRTQIAAGSRTVLAIGPAPEQQFKGLTDHLKLL 112
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: K3WU49_GLOUD (Aminoacyl-tRNA hydrolase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU49_GLOUD) HSP 1 Score: 136 bits (343), Expect = 4.970e-35 Identity = 68/135 (50.37%), Postives = 88/135 (65.19%), Query Frame = 1
Query: 46 ARSWSSETGPFKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
++SW P K+VL V LKMGKGK I AQCCHATLG+Y+ + P A+R WE +GQAK+C+K +E EL + AKA G+INY+V+DAG TQIAP S+T L +GPAP+ A ++ HLKLM
Sbjct: 82 SQSWQ----PHKMVLCVRTDLKMGKGK----------IAAQCCHATLGAYKRAVKRAPKAVRAWEMLGQAKVCLKVDSEEELLSLAAKASEHGLINYVVVDAGRTQIAPDSKTVLGIGPAPIDAINKVTGHLKLM 202
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A484E2I8_BRELC (Aminoacyl-tRNA hydrolase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E2I8_BRELC) HSP 1 Score: 135 bits (339), Expect = 1.370e-34 Identity = 65/126 (51.59%), Postives = 86/126 (68.25%), Query Frame = 1
Query: 73 PFKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
P K+V+ V LKMGKGK I AQCCHATLG+Y+ + P AIR WE +GQAK+C+K +EAEL + KA G++NY+V+DAG TQIAP S+T L++GPAP+ A + ++ HLKLM
Sbjct: 75 PHKMVMCVRTDLKMGKGK----------IAAQCCHATLGAYKRALKRAPDAIRSWETLGQAKVCLKIDSEAELMALAEKAAEHGLVNYVVIDAGRTQIAPDSKTVLSIGPAPLKAIDEVTGHLKLM 190
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: A0A0P1AIZ9_PLAHL (Aminoacyl-tRNA hydrolase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIZ9_PLAHL) HSP 1 Score: 134 bits (336), Expect = 3.780e-34 Identity = 66/138 (47.83%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 37 GGGARSWSSETGPFKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKLM 450
G + SW P K+V+ V LKMGKGK I AQCCHATLG+Y+L + P A+RGWE +GQAK+C+K +E EL + KA G+++Y+V+DAG TQIAP S+T L++GPAP+ + ++ HLKLM
Sbjct: 67 GKDSASWV----PHKMVMCVRTDLKMGKGK----------IAAQCCHATLGAYKLALKRTPDAVRGWEMLGQAKVCLKVESEEELLALADKASECGLVSYVVVDAGRTQIAPDSKTVLSIGPAPLKVIDEVTGHLKLM 190
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Match: F0Y309_AURAN (Aminoacyl-tRNA hydrolase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y309_AURAN) HSP 1 Score: 131 bits (330), Expect = 4.000e-34 Identity = 63/124 (50.81%), Postives = 85/124 (68.55%), Query Frame = 1
Query: 76 FKLVLVVNMGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGQAKICVKSPTEAELFDIQAKAQAAGIINYLVMDAGHTQIAPGSRTALALGPAPVWAFEGISSHLKL 447
+K++L VNM LK GK+ + P + AQCCHA LG+Y+ R P+A++ W GQAK+CVK P E EL ++QA AAG+++YLV DAG TQ+APGS+T LA+GPAPV + + HLKL
Sbjct: 1 YKMLLCVNMDLKDEAGKST--KMKPGKVAAQCCHAVLGAYKRGARKAPAAVKWWSMTGQAKVCVKVPKEEELLELQATLAAAGVVSYLVEDAGRTQVAPGSKTVLAVGPAPVKVLDQFTKHLKL 122 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig96.4.1 >prot_A-nodosum_M_contig96.4.1 ID=prot_A-nodosum_M_contig96.4.1|Name=mRNA_A-nodosum_M_contig96.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=118bp MGLKMGKGKARICRSSPLGIVAQCCHATLGSYRLCERYCPSAIRGWENMGback to top mRNA from alignment at A-nodosum_M_contig96:114394..116461- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig96.4.1 ID=mRNA_A-nodosum_M_contig96.4.1|Name=mRNA_A-nodosum_M_contig96.4.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2068bp|location=Sequence derived from alignment at A-nodosum_M_contig96:114394..116461- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig96:114394..116461- >mRNA_A-nodosum_M_contig96.4.1 ID=mRNA_A-nodosum_M_contig96.4.1|Name=mRNA_A-nodosum_M_contig96.4.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=354bp|location=Sequence derived from alignment at A-nodosum_M_contig96:114394..116461- (Ascophyllum nodosum dioecious)back to top |