prot_A-nodosum_M_contig9579.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9579.9.1
Unique Nameprot_A-nodosum_M_contig9579.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length124
Homology
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: D8LLV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV5_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 2.960e-25
Identity = 54/83 (65.06%), Postives = 68/83 (81.93%), Query Frame = 0
Query:    1 MAGGLLLTPEDYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERILARAED 83
            MAGGLL+TPE+Y AHV+ L  +L  AW +EEKV ALKVTVQA+KL+G++ +P+FYPALF+ VA L++ FG MVFERI  RAED
Sbjct:  390 MAGGLLVTPEEYVAHVSGLKEDLEVAWFREEKVAALKVTVQAAKLLGDVTVPSFYPALFASVAGLLEAFGVMVFERIRDRAED 472          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: L1IBY7_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IBY7_GUITC)

HSP 1 Score: 75.5 bits (184), Expect = 1.710e-14
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   11 DYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERI 77
            +Y   + ELN EL  AW+KEE+V ALK+ +Q SKL+G+   P FYP+LF +V  ++D FG +VFERI
Sbjct:   83 EYVTKMTELNEELARAWNKEERVKALKMAIQCSKLLGDSSTPQFYPSLFVLVTEILDTFGRLVFERI 149          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: F0Y850_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y850_AURAN)

HSP 1 Score: 77.8 bits (190), Expect = 3.200e-14
Identity = 33/81 (40.74%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    7 LTPEDYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERILARAEDPLDG 87
            ++ E+Y  H+  L  +L++AW+ +E+V+ALK+ +QA+KL+G    P FYPA+F + + L+D+FG +V++RI A+A+    G
Sbjct:   20 ISSEEYVQHLERLRAQLKKAWANDERVLALKIAIQAAKLLGETAAPAFYPAMFVLTSELLDLFGKLVYDRIRAKADAAAPG 100          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: A0A7S0E5H0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E5H0_9CRYP)

HSP 1 Score: 75.9 bits (185), Expect = 1.530e-13
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   11 DYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERI 77
            +Y   + ELN EL  AW+KEE+V ALK+ +Q SKL+G+   P FYP+LF +V  ++D FG +VFERI
Sbjct:  180 EYVTKMTELNEELARAWNKEERVKALKMAIQCSKLLGDTSTPQFYPSLFVLVTEILDTFGRLVFERI 246          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: A0A7S4L1S4_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L1S4_GUITH)

HSP 1 Score: 75.5 bits (184), Expect = 2.110e-13
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   11 DYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERI 77
            +Y   + ELN EL  AW+KEE+V ALK+ +Q SKL+G+   P FYP+LF +V  ++D FG +VFERI
Sbjct:  178 EYVTKMTELNEELARAWNKEERVKALKMAIQCSKLLGDSSTPQFYPSLFVLVTEILDTFGRLVFERI 244          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: A0A8C9FE21_PAVCR (VPS35 endosomal protein-sorting factor-like n=1 Tax=Pavo cristatus TaxID=9049 RepID=A0A8C9FE21_PAVCR)

HSP 1 Score: 73.2 bits (178), Expect = 2.150e-13
Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    5 LLLTPEDYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERILARAED 83
            L LT +DY   + ELN  L++AWS ++KV ALK+ +Q SKL+ +  +  FYP+ F ++  ++D FG +V+ERIL+   D
Sbjct:  112 LNLTQQDYMNRIEELNQSLKDAWSSDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLITDILDTFGKLVYERILSMCMD 190          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: UPI001955CCB2 (VPS35 endosomal protein-sorting factor-like n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955CCB2)

HSP 1 Score: 74.7 bits (182), Expect = 2.830e-13
Identity = 34/80 (42.50%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    5 LLLTPEDYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERILARAEDP 84
            L L+ +DY   + ELN  L+EAW  ++KV ALK+ +Q SKL+ +  +  FYP+ F ++  ++D FG +V++RILA   DP
Sbjct:  178 LNLSQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDTFGGLVYDRILAMCADP 257          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: A0A8J6EVZ2_ELECQ (VPS35 endosomal protein-sorting factor-like n=2 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EVZ2_ELECQ)

HSP 1 Score: 75.1 bits (183), Expect = 2.850e-13
Identity = 34/79 (43.04%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    5 LLLTPEDYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERILARAED 83
            L LT +DY + + ELN  L++AW+ ++KV ALK+ +Q SKL+ +I +  FYP+ F ++  ++D FG +V+ERIL+   D
Sbjct:  148 LNLTQQDYISRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDITVIRFYPSKFVLITDILDTFGKLVYERILSMCVD 226          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: UPI0008543C23 (UPF0505 protein C16orf62-like n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI0008543C23)

HSP 1 Score: 74.7 bits (182), Expect = 3.860e-13
Identity = 33/79 (41.77%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    5 LLLTPEDYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERILARAED 83
            L LT +DY + + ELN  L++AW+ ++KV ALK+ +Q SKL+ +  + TFYP+ F ++  ++D FG +V+ERI++   D
Sbjct:  186 LNLTQQDYISRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTTVITFYPSKFVLITDILDTFGKLVYERIMSMCMD 264          
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Match: A0A8D2KUS0_VARKO (VPS35 endosomal protein-sorting factor-like n=1 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2KUS0_VARKO)

HSP 1 Score: 74.3 bits (181), Expect = 5.320e-13
Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    5 LLLTPEDYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNILMPTFYPALFSMVAALVDVFGAMVFERILARAED 83
            L LT +DYT  + ELN  L++AW+ ++KV ALK+ +Q SKL+ +  +  FYP+ F ++  ++D FG +V+ERIL+   D
Sbjct:  198 LNLTQQDYTNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDTFGKLVYERILSMCTD 276          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9579.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLV5_ECTSI2.960e-2565.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
L1IBY7_GUITC1.710e-1452.24Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
F0Y850_AURAN3.200e-1440.74Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S0E5H0_9CRYP1.530e-1352.24Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A7S4L1S4_GUITH2.110e-1352.24Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A8C9FE21_PAVCR2.150e-1343.04VPS35 endosomal protein-sorting factor-like n=1 Ta... [more]
UPI001955CCB22.830e-1342.50VPS35 endosomal protein-sorting factor-like n=1 Ta... [more]
A0A8J6EVZ2_ELECQ2.850e-1343.04VPS35 endosomal protein-sorting factor-like n=2 Ta... [more]
UPI0008543C233.860e-1341.77UPF0505 protein C16orf62-like n=1 Tax=Nanorana par... [more]
A0A8D2KUS0_VARKO5.320e-1343.04VPS35 endosomal protein-sorting factor-like n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..123
IPR029705VPS35 endosomal protein sorting factor-likePANTHERPTHR13673ESOPHAGEAL CANCER ASSOCIATED PROTEINcoord: 7..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9579contigA-nodosum_M_contig9579:11205..12685 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9579.9.1mRNA_A-nodosum_M_contig9579.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9579 11205..12685 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9579.9.1 ID=prot_A-nodosum_M_contig9579.9.1|Name=mRNA_A-nodosum_M_contig9579.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=124bp
MAGGLLLTPEDYTAHVAELNNELREAWSKEEKVMALKVTVQASKLMGNIL
MPTFYPALFSMVAALVDVFGAMVFERILARAEDPLDGVATGASSASTPSQ
QKQAPTGDTDEAKGGAAPARAPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029705VPS35L