prot_A-nodosum_M_contig93.75.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig93.75.1
Unique Nameprot_A-nodosum_M_contig93.75.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length173
Homology
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: D7G5Q7_ECTSI (Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5Q7_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 6.800e-50
Identity = 106/172 (61.63%), Postives = 124/172 (72.09%), Query Frame = 0
Query:    4 MSISVCACATAMAVTARFAEAFVPALGGRAGLIRVDSLRTETSPVSASRPNNAFSRTYFGTSGLSTSSRVAIGRPSSSKTTTTAMALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEANAAKTTM-IETE--AVVDAQPATKKEEEQKA 172
            M ++ C    A A+ AR AEAFVPAL GRAG++     +   SP +A R  NAFS T +G+   + SSR   GRPSS  +TTT M LFGLGAPEIAVC+AVAA+ILGPDK+AG AKD GKMAGELKDVPKEFQAG+ EGEA   KT   IE+   AV DA+PATKKEEE+KA
Sbjct:    1 MKLACCVLVWACALAARVAEAFVPALAGRAGIMSAAGRQASMSPAAAGR-QNAFSHTSYGSPAQAQSSRWLSGRPSSGASTTT-MGLFGLGAPEIAVCIAVAALILGPDKMAGFAKDMGKMAGELKDVPKEFQAGVEEGEAKTQKTIREIESNGLAVEDAEPATKKEEEEKA 170          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A1E7F4Y7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4Y7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.640e-19
Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0
Query:   88 MALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEANAAKTTMIETEAVV 158
            M LFGLGAPE+ + L  AA +LGPDKLA   KD GK+AGELK+VPKEFQAG+AEGEANA K  + E   VV
Sbjct:   63 MGLFGLGAPEVGIILVAAAFLLGPDKLAEFGKDAGKIAGELKEVPKEFQAGMAEGEANAKKMKIAEEAEVV 133          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A7S4A8R7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8R7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.080e-18
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0
Query:   88 MALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEANA-AKTTMIETEAVVDAQPATK 165
            M LFGLGAPE+ + L  AA +LGPDKLA + KD GK+AGELK+VPKEFQAG+AEGEA+A A     E EA V  +  TK
Sbjct:   64 MGLFGLGAPEVGIILVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGLAEGEASAKAMKDKQEAEAAVIVEKETK 142          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A835YSI8_9STRA (Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.190e-18
Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0
Query:   88 MALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEAN 145
            M LFGLGAPEIAV + VAA++LGP+KL   AKD GKMAGELK+VPKEFQAGI EGEA+
Sbjct:   68 MGLFGLGAPEIAVIIVVAALVLGPEKLTSFAKDAGKMAGELKEVPKEFQAGIDEGEAS 125          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A7S2XUZ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUZ2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.360e-18
Identity = 52/86 (60.47%), Postives = 62/86 (72.09%), Query Frame = 0
Query:   88 MALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEG-EANAAKTTMIETEAVVDAQPATKKEEEQKA 172
            M LFGLGAPEIAVC+ VAA++LGPDKL   A+D GKMAGELK+VPKEFQ G+ EG EA   +   I+ EA  +     K EEE+KA
Sbjct:   67 MGLFGLGAPEIAVCVIVAALVLGPDKLISSARDVGKMAGELKEVPKEFQKGLEEGKEAARLEMAQIKEEATAE----KKVEEEKKA 148          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A6V1V9D4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V9D4_HETAK)

HSP 1 Score: 86.3 bits (212), Expect = 2.610e-18
Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 0
Query:   88 MALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEANA 146
            M LFGL APE+ VCLAVAA+ILGPDKL G AKD GK+AGELK+VPKEFQAG+ EG+  A
Sbjct:   71 MQLFGLSAPELLVCLAVAALILGPDKLIGSAKDLGKIAGELKEVPKEFQAGMEEGKEKA 129          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A448ZFG6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG6_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.830e-18
Identity = 43/59 (72.88%), Postives = 50/59 (84.75%), Query Frame = 0
Query:   88 MALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEANA 146
            M LFGLGAPEI + L  AA +LGPDKLA + KD GK+AGELK+VPKEFQAG+AEGEA+A
Sbjct:   61 MGLFGLGAPEIGIVLVAAAFLLGPDKLASLGKDAGKIAGELKEVPKEFQAGMAEGEASA 119          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A7S2K8J1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8J1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.120e-17
Identity = 52/88 (59.09%), Postives = 62/88 (70.45%), Query Frame = 0
Query:   70 SSRVAIGRP---SSSKTTTTAMALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEANA----AKTT 150
            S+ V +G P   ++S+  T    LFGLG PEIA+ L  AA +LGP+KLA + KD GKMAGELK+VPKEFQAGI EGE NA    AKTT
Sbjct:   69 SNSVVVGAPRTCAASQRQTQLHGLFGLGGPEIAIILVAAAFLLGPEKLAELGKDAGKMAGELKEVPKEFQAGIEEGEKNAKAMKAKTT 156          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A8J2SN64_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN64_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.750e-17
Identity = 40/55 (72.73%), Postives = 47/55 (85.45%), Query Frame = 0
Query:   90 LFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEA 144
            LFGLGAPE+ V L + A +LGPDKLA +AKDFGK+AGELKDVPKEF+ G+ EGEA
Sbjct:   74 LFGLGAPELVVILGLGAFVLGPDKLASMAKDFGKVAGELKDVPKEFKEGLEEGEA 128          
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Match: A0A7S2SMJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMJ0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 6.370e-16
Identity = 44/71 (61.97%), Postives = 54/71 (76.06%), Query Frame = 0
Query:   76 GRPSSSKTTTTAMALFGLGAPEIAVCLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEANA 146
            G P+ S+  T  M LFGLGAPEIAV + VA  +LGP KLA +A+D GK+AGELKDVP+EFQ G++EGE  A
Sbjct:   89 GAPARSQVVT--MGLFGLGAPEIAVIVGVAGFVLGPQKLAEMARDMGKVAGELKDVPREFQEGLSEGEKEA 157          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.75.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5Q7_ECTSI6.800e-5061.63Tha4/Hcf106 protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A1E7F4Y7_9STRA2.640e-1966.20Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S4A8R7_9STRA2.080e-1862.03Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A835YSI8_9STRA2.190e-1875.86Tha4/Hcf106 protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2XUZ2_9STRA2.360e-1860.47Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1V9D4_HETAK2.610e-1874.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A448ZFG6_9STRA3.830e-1872.88Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2K8J1_9STRA2.120e-1759.09Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8J2SN64_9STRA6.750e-1772.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2SMJ0_9STRA6.370e-1661.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.3310coord: 90..141
e-value: 4.5E-9
score: 37.7
NoneNo IPR availablePANTHERPTHR33162SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTICcoord: 48..155
IPR003369Sec-independent protein translocase protein TatA/B/EPFAMPF02416TatA_B_Ecoord: 93..138
e-value: 4.3E-6
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig93contigA-nodosum_M_contig93:927763..930027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig93.75.1mRNA_A-nodosum_M_contig93.75.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig93 927000..931768 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig93.75.1 ID=prot_A-nodosum_M_contig93.75.1|Name=mRNA_A-nodosum_M_contig93.75.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=173bp
MKLMSISVCACATAMAVTARFAEAFVPALGGRAGLIRVDSLRTETSPVSA
SRPNNAFSRTYFGTSGLSTSSRVAIGRPSSSKTTTTAMALFGLGAPEIAV
CLAVAAVILGPDKLAGVAKDFGKMAGELKDVPKEFQAGIAEGEANAAKTT
MIETEAVVDAQPATKKEEEQKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003369TatA/B/E