prot_A-nodosum_M_contig9275.2.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: D8LQZ5_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ5_ECTSI) HSP 1 Score: 337 bits (865), Expect = 2.720e-112 Identity = 182/232 (78.45%), Postives = 198/232 (85.34%), Query Frame = 0
Query: 1 MLHHVIEVVGRSSSGKTQLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTSYMDGVTEGGLDGVYSDCRLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVA----SNEEGPRAALGATWEVVPSIRLVLSDASEEE--ASXXXXXXXXXXXXXGAVTARTATVLKHPAQA 226
MLHHV+EVVGRSSSGKTQLCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRV+RAFDI+ VMSAL +Y+DGV EGG +GVYSDCRLVILDSVTAV+SPLLGG KNP GHGLMA+LGHLLNRAASQCSACVLVAN+TVA S EEGPRAALG TWE VPSIR++L++AS AS G + RTAT+LKHPAQA
Sbjct: 175 MLHHVVEVVGRSSSGKTQLCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVVRAFDISRVMSALVAYIDGVMEGGRNGVYSDCRLVILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLVANSTVAPRGISEEEGPRAALGLTWEGVPSIRVLLAEASAAAGGASGSGDAGGADHGTVGEASPRTATLLKHPAQA 406
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: A0A6H5L2A5_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A5_9PHAE) HSP 1 Score: 243 bits (620), Expect = 9.670e-79 Identity = 124/149 (83.22%), Postives = 137/149 (91.95%), Query Frame = 0
Query: 18 QLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTSYMDGVTEGGLDGVYSDCRLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNE 166
QLCLTAAVAAASHGIGVLY+DTANGCSVRRMQQIARSRYADANGEM ARQ+DALLDRLRV+RAFD++ VMSAL +Y+DGV EGG +GVYSDCRL+ILDSVTAV+SPLLGG KNP GHGLMA+LGHLLNRAASQCSACVLV + S+E
Sbjct: 13 QLCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMAARQVDALLDRLRVVRAFDVSRVMSALVAYIDGVMEGGRNGVYSDCRLIILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLVGCFFLCSSE 161
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: A0A835YM23_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM23_9STRA) HSP 1 Score: 134 bits (338), Expect = 9.030e-34 Identity = 100/277 (36.10%), Postives = 127/277 (45.85%), Query Frame = 0
Query: 2 LHHVIEVVGRSSSGKTQLCLTAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSAL---------TSYMDGVTEGGLDGVYSDCRLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNEEGP--------------------------RAALGATWEVVPSIRLVLSDASEEEASXXXXXXXXXXXXXGAVTARTATVLKHPAQACG-KTAKFAIGDGGVVD 242
L V EVVG++ +GKTQLC++AA AAS GIGVLY+DT NGCS RR+Q+IA +R A A L + + R + + V++AL T RLVILDS AV++PLLGG N G +ATL L+ A S VLV N VA RAALGA W P++RL+L GA + R A + KHP +ACG A+FA+G GVVD
Sbjct: 116 LQQVTEVVGQTGAGKTQLCMSAAAVAASSGIGVLYIDTTNGCSPRRLQEIAAARGGSAAAP-------AALSHITIERCYSLANVLAALDGLATRLVRTPIATAAXXXXXXXXAHAIRLVILDSAAAVLAPLLGGEGNAPGAAALATLAAALSHTALSLSVAVLVTNGAVADRAPXXXXXXXXXGSRGFGXXXXXXXXXXXXKRAALGARWAAAPAVRLLLDG--------------------GAQSGRVAVLDKHPLRACGGAAARFAVGGAGVVD 365
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: A0A1Y1HKY4_KLENI (DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKY4_KLENI) HSP 1 Score: 120 bits (302), Expect = 7.440e-29 Identity = 87/245 (35.51%), Postives = 128/245 (52.24%), Query Frame = 0
Query: 5 VIEVVGRSSSGKTQLCLTAAVAAASH-GIGVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTS---YMDGV-TEGGLDGVYSD----CRLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNEEGPRAALGATWEVVPSIRLVLSDASEEEASXXXXXXXXXXXXXGAVTARTATVLKHPAQACGKTAKFAIGDGGV 240
+ E+VG S+SGKTQLCL AA AAA V ++DT+N S R+ QI + +++ + R+ +AFDI T + L +MDG ++ G DG D +L+ILDS +A++SP+LGGA + GH LM +L LL + A + + VLV N TV+ P+ ALG +W+ VPS+RL L+ E + TATV KH ACG++ + + G+
Sbjct: 101 ITELVGTSASGKTQLCLQAAAAAALELRASVAFIDTSNSFSAHRLAQIVTGLHGKDKFVEHKQELRNVARRVLCFKAFDIYTALRLLDDLLVHMDGAESKRGGDGNQGDFFQKLQLLILDSASAIISPVLGGA-HTQGHALMVSLSGLLRQIALKHNIAVLVTNHTVSGEGGRPKPALGESWKSVPSVRLALAREDESDCC-------------------TATVTKHTIGACGESVPYVLSRDGL 325
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: UPI0018D9AD9F (DNA repair protein RAD51 homolog 4-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D9AD9F) HSP 1 Score: 113 bits (282), Expect = 4.040e-26 Identity = 81/235 (34.47%), Postives = 118/235 (50.21%), Query Frame = 0
Query: 7 EVVGRSSSGKTQLCLTAAVAAASHGI-GVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTSYMDGVTEGGLDGVYSDCRLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNEEGPRAALGATWEVVPSIRLVLSDASEEEASXXXXXXXXXXXXXGAVTARTATVLKHPAQACGKTAKFAIGDGGV 240
E+ G ++GKTQLC+T A + A+ VLY+DT G S +R+Q I +R T + M A RLR R FD+ ++S L + + G D Y+ +LV++DSVTAVV+P+LGG + +GHG+M L L A + S VL+ N V + + ALG TW VP RL+L+ ++AS R A ++K Q + F I D G+
Sbjct: 104 EITGGPATGKTQLCMTTAASVATTAQQNVLYIDTNGGFSSQRLQDIMAAR------GNTDKIMAAAFQRLRCARTFDLFELLSLLEMTKSSM-DSGSDAFYASLKLVVVDSVTAVVAPVLGGQQT-EGHGMMIHLARSLKALAVEYSVAVLLTNNQVRGDGTQRKPALGRTWSHVPHCRLLLTHDRSDDASLCTVNRPIN---------REARIIKSGRQPINVSCTFKIDDSGI 321
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: UPI00148A19CE (DNA repair protein RAD51 homolog 4 isoform X1 n=4 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A19CE) HSP 1 Score: 112 bits (279), Expect = 9.000e-26 Identity = 78/239 (32.64%), Postives = 120/239 (50.21%), Query Frame = 0
Query: 5 VIEVVGRSSSGKTQLCLTAAVAAASHGI-GVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTSYMDGVTEGGLDGVYSDCRLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNEEGPRAALGATWEVVPSIRLVLSDASEEEASXXXXXXXXXXXXXGAVTARTATVLKHPAQACGKTAKFAIGDGGVVD 242
V E+ G SSGKTQ CL+ V+ V+++DT G S R+ +IA S Y + + ++ +L ++VI AFDI +M+AL + D + + +D Y +L+++DS+TAV+ P LGG + DGHGLM L L A+ S CVLV N + + +LG TW VP RL++S ++E++ R ++K A G K I + G+ D
Sbjct: 102 VTEIAGEISSGKTQFCLSLCVSVVMKARQNVVFIDTCGGFSADRLAEIAESLYGEEH-------LEHILQSVKVIEAFDIFHLMTALQTIKDKMVKK-VDPFYDTLKLLVVDSITAVIYPSLGG-QQMDGHGLMVQLSLKLRHLAADFSLCVLVVNNVIGDG----KVSLGKTWSHVPHCRLLISHPKDQESNV-----------------RELVLIKSSRLATGGKTKIGITEKGIED 310
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: UPI0010A4F16E (DNA repair protein RAD51 homolog 4 isoform X1 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A4F16E) HSP 1 Score: 110 bits (275), Expect = 5.500e-25 Identity = 82/247 (33.20%), Postives = 125/247 (50.61%), Query Frame = 0
Query: 2 LHHVIEVVGRSSSGKTQLCLTAAVAAASHGIG-VLYLDTANGCSVRRMQQIA-RSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTSYMDGVTEGGLDGVYSDC--RLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNEEGPRAALGATWEVVPSIRLVLSDASEEEASXXXXXXXXXXXXXGAVTARTATVLKHPAQACGKTAKFAIGDGGVVDMY 244
L V E+VG SSSGKTQ CL A AA+ IG V+YLDT N S +R+ A +S +N + + + +LDR+ F+I + L + SDC RL+I+DSV+++++P+LGG+ P GH LM ++G LL + A + + VLV N V + + ALG +W+ VP +R++LS E T +++KHP+ C KF GV+ ++
Sbjct: 106 LGQVTELVGPSSSGKTQACLQFATTAATKHIGFVIYLDTCNAFSPQRIAHYAGQSSGPVSNDQADHKPLQQVLDRIICYSVFNIFQMFDLLHQLEINLRSQMFK---SDCQVRLLIVDSVSSLITPILGGS-GPQGHALMISVGFLLKKLAHEHNLAVLVTNHMVGGDSGTSKPALGESWKTVPHVRILLSRDRESNIC-------------------TFSIIKHPSMVCPSVRKFL---DGVIGLF 326
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: UPI000B77DE8F (DNA repair protein RAD51 homolog 4 isoform X4 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B77DE8F) HSP 1 Score: 107 bits (268), Expect = 2.530e-24 Identity = 78/234 (33.33%), Postives = 117/234 (50.00%), Query Frame = 0
Query: 7 EVVGRSSSGKTQLCL-TAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTSYMDGVTEGGLDGVYSDC--RLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNEEGPRAALGATWEVVPSIRLVLSDASEEEASXXXXXXXXXXXXXGAVTARTATVLKHPAQACGKTAKFAIGD 237
E+VG SSSGKTQLCL AA A H V++LDT N S RR++ R E ++ + FDI ++ L + + G G DC R +I+DS++++++P+LGG+ P GH LM + G LL + A + + VLV N VA + ALG +W+ +P +RL+LS +A + ++LKHP+ A G+ A+F I D
Sbjct: 91 ELVGPSSSGKTQLCLRVAANVAIQHKGRVIFLDTGNSFSPRRIEHFVRQISGSVFNEK-------VMSNILCHSTFDIFSMFDVLHQLENSLKSQGHKG---DCKARTLIVDSISSLITPILGGS-GPQGHALMTSAGFLLKKLAHELNIAVLVTNHMVAGEGGNLKPALGESWKSIPHVRLLLSRDQGNKAC-------------------SISILKHPSLASGEVARFVIDD 294
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: UPI001BB27994 (DNA repair protein RAD51 homolog 4-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB27994) HSP 1 Score: 108 bits (269), Expect = 2.890e-24 Identity = 81/237 (34.18%), Postives = 119/237 (50.21%), Query Frame = 0
Query: 5 VIEVVGRSSSGKTQLCLT-AAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTSYMDGVTEGGLDGVYSDCRLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNEEGPRAALGATWEVVPSIRLVLSDASEEEASXXXXXXXXXXXXXGAVTARTATVLKHPAQACGKTAKFAIGDGGV 240
V EVVG+++ GKTQ CLT A+ A S VLY+DT G R+ +I + + ++TA A L ++ + FD+ ++ L S + + G D YS +LV+LDSVTAV++PLLGG K+ +G G+M L L A+ S V+V N V P+ +LG TW VP R+ L + + RTA+++K QA + AIG+ GV
Sbjct: 102 VTEVVGQAAIGKTQFCLTLASCVAVSSEQNVLYVDTNGGFDAGRLHEIIA--HKSTSEKITA----AALQKVHCAKTFDLYDLLDLLESIKASI-DSGTDVFYSSLKLVVLDSVTAVLAPLLGG-KHSEGQGMMVHLARSLKSLAADYSIAVVVCNNMVRGERGEPKPSLGRTWLSVPHTRIQLRADGRDGITSRDDLR------------RTASLVKSQRQAINTSCNIAIGNQGV 318
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Match: UPI000B790AAF (DNA repair protein RAD51 homolog 4 isoform X1 n=4 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B790AAF) HSP 1 Score: 107 bits (268), Expect = 3.630e-24 Identity = 78/234 (33.33%), Postives = 117/234 (50.00%), Query Frame = 0
Query: 7 EVVGRSSSGKTQLCL-TAAVAAASHGIGVLYLDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVIRAFDITTVMSALTSYMDGVTEGGLDGVYSDC--RLVILDSVTAVVSPLLGGAKNPDGHGLMATLGHLLNRAASQCSACVLVANTTVASNEEGPRAALGATWEVVPSIRLVLSDASEEEASXXXXXXXXXXXXXGAVTARTATVLKHPAQACGKTAKFAIGD 237
E+VG SSSGKTQLCL AA A H V++LDT N S RR++ R E ++ + FDI ++ L + + G G DC R +I+DS++++++P+LGG+ P GH LM + G LL + A + + VLV N VA + ALG +W+ +P +RL+LS +A + ++LKHP+ A G+ A+F I D
Sbjct: 111 ELVGPSSSGKTQLCLRVAANVAIQHKGRVIFLDTGNSFSPRRIEHFVRQISGSVFNEK-------VMSNILCHSTFDIFSMFDVLHQLENSLKSQGHKG---DCKARTLIVDSISSLITPILGGS-GPQGHALMTSAGFLLKKLAHELNIAVLVTNHMVAGEGGNLKPALGESWKSIPHVRLLLSRDQGNKAC-------------------SISILKHPSLASGEVARFVIDD 314 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9275.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig9275.2.1 ID=prot_A-nodosum_M_contig9275.2.1|Name=mRNA_A-nodosum_M_contig9275.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=246bpback to top |