prot_A-nodosum_M_contig92.53.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig92.53.2
Unique Nameprot_A-nodosum_M_contig92.53.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length602
Homology
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BLAST of mRNA_A-nodosum_M_contig92.53.2 vs. uniprot
Match: A0A6H5KAZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ5_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 5.670e-43
Identity = 135/345 (39.13%), Postives = 166/345 (48.12%), Query Frame = 0 
Query:  285 RSAPLLNECVPPAAFAQVSVQALMQQTSAIIARWKELQETLDVTSDSSTSNLSEQARARASLKRDLTNLTQLADAQTKYMQRIKMRCNQETPM---------------STGVS----GDSIASTSLLASTTPAGRGGLTREEYNH-PTKDSAIPVSAPRGAPVVP--------------SPFPPENS--IGAVLMHEGGDDDVRDSLTTEQQDRSEDPAAAWQPTEWPSSTPSPRQTGVPNPPSPALPPQQVISLQHRLHNARQRLDRAEPRNKWVVLVDACLRLMPHEGSAFEQFFVNIQSLLKNFNGPLGAEVAVALQSCFDERVFDPTDITRAQQRMADIYS 593
            R +PLL++ VPPA  A V+V  L+QQT+  I RW+ELQ+ LDV SDS+++NL+ QA  R+SLKRDLTNL QLADAQTK+ Q++K R  Q                   + GV     G + A     A    A  G  T E Y+  P K   +                          S +   NS   GA+LM +G                    A            PS R  G+                       RQR+DR EP NKWVVLVDA LRL P +G+ FE F   IQ+ L N+NG +GAEVA AL SC D RVFDPTDI RAQ+RMADI S
Sbjct:   63 RPSPLLSDYVPPAGLALVNVPVLLQQTACAIVRWEELQKNLDVRSDSASANLAAQAHVRSSLKRDLTNLIQLADAQTKHTQKMKFRQMQAMQXXXXXXXXXXXXXXXXAQGVQPLPGGRNPARGGTGAGLDSARAGVATGEAYDEFPPKRKQVXXXXXXXXXXXXXXXXXXXXXXXXNASSYAASNSGPTGAMLMQQGAGXXXXXXXXXXXXXXXXXXAP-----------PSNRHEGI-----------------------RQRIDRTEPANKWVVLVDASLRLPPGDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICS 373
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BLAST of mRNA_A-nodosum_M_contig92.53.2 vs. uniprot
Match: D8LB93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB93_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.130e-25
Identity = 62/103 (60.19%), Postives = 70/103 (67.96%), Query Frame = 0 
Query:  491 PSPALPPQQVISLQHRLHNARQRLDRAEPRNKWVVLVDACLRLMPHEGSAFEQFFVNIQSLLKNFNGPLGAEVAVALQSCFDERVFDPTDITRAQQRMADIYS 593
            P P  PP       +R    RQR+DR EP NKWVVLVDA LRL P +G+ FE F   IQ+ L N+NG +GAEVA AL SC D RVFDPTDI RAQ+RMADI S
Sbjct:  128 PGPGAPPPS-----NRHEGIRQRIDRTEPANKWVVLVDASLRLPPGDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICS 225
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig92.53.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAZ5_9PHAE5.670e-4339.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB93_ECTSI1.130e-2560.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 483..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..498

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig92contigA-nodosum_M_contig92:685932..688544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig92.53.2mRNA_A-nodosum_M_contig92.53.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig92 685669..689382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig92.53.2 ID=prot_A-nodosum_M_contig92.53.2|Name=mRNA_A-nodosum_M_contig92.53.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=602bp
MSIHNVTYILLQASRACNIQNSEPFMSNLGAKTQSWQGPPDLPVMGGGFG
DTHPFQHPEGGRSHIDGPAGFGVPESDVGHAQNHGHVETYDHEGLQSPAS
ASLEEHRFATSPTSFPMPMSSIGSFETGGMVNAHGSAPRQTSTPQPWPAS
PRDYRNQQPDLDVNSITQALQQPHQAQMHLQQELFQMEQRQQRQHGVEQD
NHQQSAGTLSNSCAGFERLGQQSKQQQQQQQQRKLQHRQEHRRINSQVTS
LEQYEPSGRCDQQQQQQMQRSWQGNQQNQQRAQIRSAPLLNECVPPAAFA
QVSVQALMQQTSAIIARWKELQETLDVTSDSSTSNLSEQARARASLKRDL
TNLTQLADAQTKYMQRIKMRCNQETPMSTGVSGDSIASTSLLASTTPAGR
GGLTREEYNHPTKDSAIPVSAPRGAPVVPSPFPPENSIGAVLMHEGGDDD
VRDSLTTEQQDRSEDPAAAWQPTEWPSSTPSPRQTGVPNPPSPALPPQQV
ISLQHRLHNARQRLDRAEPRNKWVVLVDACLRLMPHEGSAFEQFFVNIQS
LLKNFNGPLGAEVAVALQSCFDERVFDPTDITRAQQRMADIYSQCARRVQ
R*
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