prot_A-nodosum_M_contig9180.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9180.1.1
Unique Nameprot_A-nodosum_M_contig9180.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length66
Homology
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BLAST of mRNA_A-nodosum_M_contig9180.1.1 vs. uniprot
Match: D8LL63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 2.230e-6
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:    1 MARNKSKATAMLSNVKVGNAEQGDVLDLVVADICDRSSLTPSLFEVLWTVLS 52
            MARNKSKA AML+  K    + G  LD+VVADI D+SSLTPSLF+ +  V+S
Sbjct:    1 MARNKSKALAMLTGGK--ETKGGSGLDVVVADIADKSSLTPSLFKDVAAVVS 50
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BLAST of mRNA_A-nodosum_M_contig9180.1.1 vs. uniprot
Match: A0A6H5KMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 1.480e-5
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0 
Query:    1 MARNKSKATAMLSNVKVGNAEQGDVLDLVVADICDRSSLTPSLFEVLWTVLS 52
            MARNKSKA AML+  K    + G  LD+VVA+I D+SSLTPSLF+ +  V+S
Sbjct:  184 MARNKSKALAMLTEGK--ETKGGSGLDVVVANIIDKSSLTPSLFKDVAAVVS 233
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9180.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL63_ECTSI2.230e-659.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMW5_9PHAE1.480e-557.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9180contigA-nodosum_M_contig9180:5973..6395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9180.1.1mRNA_A-nodosum_M_contig9180.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9180 5713..6473 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9180.1.1 ID=prot_A-nodosum_M_contig9180.1.1|Name=mRNA_A-nodosum_M_contig9180.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=66bp
MARNKSKATAMLSNVKVGNAEQGDVLDLVVADICDRSSLTPSLFEVLWTV
LSHQSPVRLVWHCRP*
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