prot_A-nodosum_M_contig9171.5.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9171.5.2
Unique Nameprot_A-nodosum_M_contig9171.5.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length225
Homology
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BLAST of mRNA_A-nodosum_M_contig9171.5.2 vs. uniprot
Match: D7G239_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G239_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 5.630e-20
Identity = 58/105 (55.24%), Postives = 75/105 (71.43%), Query Frame = 0 
Query:    5 QDEAASRLMLREKRLRTEMERACKALREERDDRVCKVAAAKENLREKLEQLSSMYXXXXXXXXXXXXXXTNAEDELRERASVDQRKAEQREEQGVRRRIRAMMIE 109
            Q+EAA RL+ RE R+  E+ER+CKAL  ERD+RV  VAA K+NLR KLEQLS+MY                AE+EL++RA  DQRKA +RE++GVRRR+RA+M+E
Sbjct:  289 QEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSTMYEEVSTRMNNLEKAYAQAENELKDRALADQRKAAEREDRGVRRRVRAIMLE 393
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BLAST of mRNA_A-nodosum_M_contig9171.5.2 vs. uniprot
Match: A0A6H5JN10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN10_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.600e-19
Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 0 
Query:    5 QDEAASRLMLREKRLRTEMERACKALREERDDRVCKVAAAKENLREKLEQLSSMYXXXXXXXXXXXXXXTNAEDELRERASVDQRKAEQREEQGVRRRIRAMMIE 109
            Q+EAA RL+ RE R+  E+ER+CKAL  ERD+RV  VAA K+NLR KLEQLS MY                AE EL++RA  DQRKA +RE++GVRRR+RA+M+E
Sbjct:  146 QEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSIMYEEVSTRMDNLEKAYAQAESELKDRALADQRKAVEREDRGVRRRVRAIMLE 250
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9171.5.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G239_ECTSI5.630e-2055.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JN10_9PHAE1.600e-1955.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..96
NoneNo IPR availableCOILSCoilCoilcoord: 13..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9171contigA-nodosum_M_contig9171:19431..21307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9171.5.2mRNA_A-nodosum_M_contig9171.5.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9171 18057..21467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9171.5.2 ID=prot_A-nodosum_M_contig9171.5.2|Name=mRNA_A-nodosum_M_contig9171.5.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=225bp
MCLDQDEAASRLMLREKRLRTEMERACKALREERDDRVCKVAAAKENLRE
KLEQLSSMYEEVSKRLEELKMAYTNAEDELRERASVDQRKAEQREEQGVR
RRIRAMMIEQSKNALDDGVEIGERSSARSEETPSTIEAEQPPKLQPQVQK
RQQSQQQQQQQRVTGRSREGTPVKGAAKVKRSGSRDRRRLSAGSVDSADA
PVGVGLGRGVSAVRRRRASVELRR*
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