prot_A-nodosum_M_contig9171.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9171.4.1
Unique Nameprot_A-nodosum_M_contig9171.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length83
Homology
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BLAST of mRNA_A-nodosum_M_contig9171.4.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 6.000e-11
Identity = 33/56 (58.93%), Postives = 37/56 (66.07%), Query Frame = 0 
Query:    2 NNCFLNAALGLALAVFDGQSLPDSSYCTPAAAAFFSAFIIIKDNMFQGNPLQQRVL 57
            NN FLN+A+ L LA FDG S PD   CTPA AAFF A  +I+D MF G  LQQ  L
Sbjct: 1968 NNYFLNSAMALTLAAFDGLSPPDGRDCTPAGAAFFPAIKLIQDTMFNGESLQQDTL 2023
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9171.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JN07_9PHAE6.000e-1158.93ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9171contigA-nodosum_M_contig9171:13761..14410 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9171.4.1mRNA_A-nodosum_M_contig9171.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9171 13761..14411 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9171.4.1 ID=prot_A-nodosum_M_contig9171.4.1|Name=mRNA_A-nodosum_M_contig9171.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=83bp
GNNCFLNAALGLALAVFDGQSLPDSSYCTPAAAAFFSAFIIIKDNMFQGN
PLQQRVLGCYYHYYSRDPSKLHRRKNRGILLVT
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