prot_A-nodosum_M_contig9171.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9171.3.1
Unique Nameprot_A-nodosum_M_contig9171.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length115
Homology
BLAST of mRNA_A-nodosum_M_contig9171.3.1 vs. uniprot
Match: A0A6H5L805_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L805_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 1.260e-52
Identity = 83/111 (74.77%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    1 MVFQCEKGKHTDHIRIRSKATNTLLFFRGIKQPRTWVAWDRDVAGGEWEDLKLEWVGSPPGLNGSLRADERGRVIIHSRHLNAYVSWNGSHFTHVPNREGATVFMFQRAAP 111
            M+FQ E G+H DH+RIRS+ATNT LFF GIKQP TWVAWDRDV GGEWEDLKLEWVG P G +G L  DERGRV+I SR +  YVSWNGS FTHVP REGATVFM QR AP
Sbjct:  624 MLFQAENGRHRDHVRIRSRATNTFLFFLGIKQPLTWVAWDRDVVGGEWEDLKLEWVGKPQGPDGVLVGDERGRVVIRSRPMKGYVSWNGSRFTHVPGREGATVFMLQRMAP 734          
BLAST of mRNA_A-nodosum_M_contig9171.3.1 vs. uniprot
Match: A0A835YVS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS8_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.430e-26
Identity = 47/107 (43.93%), Postives = 70/107 (65.42%), Query Frame = 0
Query:    1 MVFQCEKGKHTDHIRIRSKATNTLLFFRGIKQPRTWVAWDRDVAGGEWEDLKLEWVGSPPGLNGSLRADERGRVIIHSRHLNAYVSWNGSHFTHVPNREGATVFMFQ 107
            +VFQCE G+   H+RIRS+ +NT LF  G+++P T VAWDR+VAGG+WED+++ W+          RA++ GRV+I  +    Y+ W G+ F H P ++ A+ FM Q
Sbjct:  501 LVFQCEPGRAAGHVRIRSRGSNTYLFMLGLRRPLTLVAWDREVAGGDWEDMRIVWL---------PRAEDEGRVLIRCKTAGGYLQWTGTKFVHTPVKDSASRFMLQ 598          
BLAST of mRNA_A-nodosum_M_contig9171.3.1 vs. uniprot
Match: A0A835ZHV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHV2_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.410e-25
Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 0
Query:    1 MVFQCEKGKHTDHIRIRSKATNTLLFFRGIKQPRTWVAWDRDVAGGEWEDLKLEWVGSPPGLNGSLRADERGRVIIHSRHLNAYVSWNGSHFTHVPNREGATVFMFQ 107
            M+FQCE G+ + H+ +RS+ TNTLLF  G+++PRT VAWDR+V GG+WED+++EW             +  G V+I  +    Y+ W G  F HV  R+ A+ FM Q
Sbjct:  415 MLFQCEPGRASGHVWLRSRGTNTLLFMLGLRKPRTLVAWDREVPGGDWEDMRIEWC-----------PEHNGHVVISCKRAGGYLQWTGDRFGHVDERDCASRFMLQ 510          
BLAST of mRNA_A-nodosum_M_contig9171.3.1 vs. uniprot
Match: D8LSC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC8_ECTSI)

HSP 1 Score: 62.8 bits (151), Expect = 4.050e-9
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = 0
Query:    1 MVFQCEKGKHTDHIRIRSKATNTLLFFRGIKQPRTWV 37
            M+FQ E G+H  H+RIRS+ATNT LFF GIKQP TWV
Sbjct:  423 MLFQAENGRHRGHVRIRSRATNTFLFFLGIKQPLTWV 459          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9171.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L805_9PHAE1.260e-5274.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835YVS8_9STRA1.430e-2643.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZHV2_9STRA3.410e-2542.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LSC8_ECTSI4.050e-970.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9171contigA-nodosum_M_contig9171:3990..5158 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9171.3.1mRNA_A-nodosum_M_contig9171.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9171 3964..5311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9171.3.1 ID=prot_A-nodosum_M_contig9171.3.1|Name=mRNA_A-nodosum_M_contig9171.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=115bp
MVFQCEKGKHTDHIRIRSKATNTLLFFRGIKQPRTWVAWDRDVAGGEWED
LKLEWVGSPPGLNGSLRADERGRVIIHSRHLNAYVSWNGSHFTHVPNREG
ATVFMFQRAAPRPA*
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