prot_A-nodosum_M_contig917.13.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig917.13.1
Unique Nameprot_A-nodosum_M_contig917.13.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length60
Homology
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A6H5KJ82_9PHAE (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ82_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 6.510e-14
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 0
Query:    1 MFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAEVI 59
            MFVSGFTIGF++GW+L+LVML VVPPLA+AG  +   LA L +  QKS AAAGGVAE +
Sbjct:  213 MFVSGFTIGFVKGWELSLVMLSVVPPLAIAGGFLFGDLARLASQFQKSNAAAGGVAEEV 271          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: D8LB49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB49_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 1.540e-13
Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 MFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 57
            MFVSGFTIGF++GW+L+LVML VVPPLA+AG  +   LA L +  QKS AAAGGVAE
Sbjct:  210 MFVSGFTIGFVKGWELSLVMLSVVPPLAIAGGFLFGDLARLASQFQKSNAAAGGVAE 266          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A7S1CBQ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBQ7_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.620e-8
Identity = 29/56 (51.79%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    2 FVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 57
            F++GF +GF  GW+L LV+L VVP LA++G++M+  +A+  T  QK+ A AGGVAE
Sbjct:  207 FLTGFAVGFYYGWELTLVLLSVVPALAISGMLMMNFMAWAQTASQKAYAKAGGVAE 262          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A7S1G7G2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G7G2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.630e-8
Identity = 29/56 (51.79%), Postives = 42/56 (75.00%), Query Frame = 0
Query:    2 FVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 57
            F++GF +GF  GW+L LV+L VVP LA++G++M+  +A+  T  QK+ A AGGVAE
Sbjct:  207 FLTGFAVGFYYGWELTLVLLSVVPALAISGMLMMNFMAWAQTASQKAYAKAGGVAE 262          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A0D2U039_CAPO3 (Multidrug resistance protein 1a n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U039_CAPO3)

HSP 1 Score: 56.2 bits (134), Expect = 1.060e-7
Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    2 FVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAEVI 59
            F +GF I F+RGWQLALV+L V+P LAV G    K LA  TT  QK+ A AG +AE +
Sbjct:  275 FFAGFVIAFVRGWQLALVLLAVIPFLAVCGGFFSKMLASATTKGQKAYAGAGAIAEEV 332          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: F4PX48_CAVFA (ABC transporter B family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PX48_CAVFA)

HSP 1 Score: 53.9 bits (128), Expect = 6.940e-7
Identity = 31/56 (55.36%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    2 FVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 57
            F+SGF IG + GWQLALV+L + P LA AG  M K +  LT   Q S A AG VAE
Sbjct:  246 FISGFVIGLINGWQLALVILALTPLLAAAGAFMTKMMTDLTKKGQDSYAKAGAVAE 301          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A2T9Y2V7_9FUNG (Uncharacterized protein n=2 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9Y2V7_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 9.490e-7
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    2 FVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAEVI 59
            F SG  + F+RGW++ALV+LCV+P + V+  ++ K +   T L+Q S A AGGVA  +
Sbjct:  209 FCSGIILAFVRGWKMALVVLCVIPLIVVSSAILSKFIVKFTRLVQTSYAGAGGVATEV 266          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A485KDS9_9STRA (Aste57867_3317 protein n=3 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDS9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.300e-6
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    2 FVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 57
            F++G+ IGF+RGW L+LVM CV+P +AV+   ++K+L   T   QK  AAAG VAE
Sbjct:  190 FLTGYLIGFVRGWNLSLVMSCVMPLMAVSLTFVIKRLRDSTARSQKVYAAAGAVAE 245          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: UPI00096ADB6D (multidrug resistance protein 1-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096ADB6D)

HSP 1 Score: 52.8 bits (125), Expect = 1.760e-6
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    2 FVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAEVI 59
            F +GF +GF+RGWQLAL++  + P +AVAG++  +  A  T+  QK  A AG +AE +
Sbjct:  370 FFAGFVVGFIRGWQLALLLTFITPFMAVAGIIFYRVAASFTSQEQKLYAGAGAIAEEV 427          
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: UPI000644B214 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B214)

HSP 1 Score: 52.8 bits (125), Expect = 1.780e-6
Identity = 30/56 (53.57%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    2 FVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 57
            F+SGF +G + GWQLALV+L + P LA AG  M K +  LT   Q S A AG VAE
Sbjct:  239 FISGFIVGLVNGWQLALVILAITPLLAAAGGFMTKMMTELTKKGQDSYAKAGAVAE 294          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJ82_9PHAE6.510e-1466.10ABC transmembrane type-1 domain-containing protein... [more]
D8LB49_ECTSI1.540e-1368.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1CBQ7_9STRA1.620e-851.79Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1G7G2_9STRA1.630e-851.79Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A0D2U039_CAPO31.060e-755.17Multidrug resistance protein 1a n=1 Tax=Capsaspora... [more]
F4PX48_CAVFA6.940e-755.36ABC transporter B family protein n=1 Tax=Cavenderi... [more]
A0A2T9Y2V7_9FUNG9.490e-744.83Uncharacterized protein n=2 Tax=Smittium megazygos... [more]
A0A485KDS9_9STRA1.300e-651.79Aste57867_3317 protein n=3 Tax=Aphanomyces stellat... [more]
UPI00096ADB6D1.760e-644.83multidrug resistance protein 1-like n=1 Tax=Amphim... [more]
UPI000644B2141.780e-653.57hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 1..57
e-value: 2.5E-9
score: 37.2
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..59
score: 11.058542
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10ABC transporter type 1, transmembrane domaincoord: 1..58
e-value: 4.2E-13
score: 50.4
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig917contigA-nodosum_M_contig917:220027..220206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig917.13.1mRNA_A-nodosum_M_contig917.13.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig917 220027..220233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig917.13.1 ID=prot_A-nodosum_M_contig917.13.1|Name=mRNA_A-nodosum_M_contig917.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=60bp
MFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTA
AAGGVAEVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
IPR036640ABC1_TM_sf