mRNA_A-nodosum_M_contig917.13.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A6H5KJ82_9PHAE (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ82_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 1.820e-16 Identity = 42/68 (61.76%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAEVI 204
L ++I+ SMFVSGFTIGF++GW+L+LVML VVPPLA+AG + LA L + QKS AAAGGVAE +
Sbjct: 204 LARLIQFMSMFVSGFTIGFVKGWELSLVMLSVVPPLAIAGGFLFGDLARLASQFQKSNAAAGGVAEEV 271
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: D8LB49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB49_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 6.050e-16 Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 198
L ++I+ SMFVSGFTIGF++GW+L+LVML VVPPLA+AG + LA L + QKS AAAGGVAE
Sbjct: 201 LARLIQFMSMFVSGFTIGFVKGWELSLVMLSVVPPLAIAGGFLFGDLARLASQFQKSNAAAGGVAE 266
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A4Y2M007_ARAVE (Multidrug resistance protein 1B (Fragment) n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2M007_ARAVE) HSP 1 Score: 62.8 bits (151), Expect = 7.340e-10 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 198
LG +I++AS FVSGF +GF++GWQL LV+L V P L ++ ++ K + T QK A AGG+AE
Sbjct: 13 LGILIQYASTFVSGFLVGFVKGWQLTLVILSVTPLLTLSSAILGKMTTFAATEEQKKYAIAGGIAE 78
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A0D2U039_CAPO3 (Multidrug resistance protein 1a n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U039_CAPO3) HSP 1 Score: 62.4 bits (150), Expect = 1.040e-9 Identity = 34/68 (50.00%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAEVI 204
+G +H + F +GF I F+RGWQLALV+L V+P LAV G K LA TT QK+ A AG +AE +
Sbjct: 265 VGVFFQHFTTFFAGFVIAFVRGWQLALVLLAVIPFLAVCGGFFSKMLASATTKGQKAYAGAGAIAEEV 332
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A2T9Y2V7_9FUNG (Uncharacterized protein n=2 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9Y2V7_9FUNG) HSP 1 Score: 61.2 bits (147), Expect = 2.660e-9 Identity = 29/68 (42.65%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAEVI 204
+G +I++ S F SG + F+RGW++ALV+LCV+P + V+ ++ K + T L+Q S A AGGVA +
Sbjct: 199 MGFMIQYISTFCSGIILAFVRGWKMALVVLCVIPLIVVSSAILSKFIVKFTRLVQTSYAGAGGVATEV 266
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A067CTD7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTD7_SAPPC) HSP 1 Score: 59.7 bits (143), Expect = 9.280e-9 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 198
LG+ ++ F+SG+ IGF++GW +ALVM V+P +A+ ++K+L T Q+S AAAG VAE
Sbjct: 177 LGEAVQFTCQFISGYIIGFVKGWNVALVMCAVMPMMAITMTFLIKRLRDSTAQSQRSYAAAGAVAE 242
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A485KDS9_9STRA (Aste57867_3317 protein n=3 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDS9_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.270e-8 Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 198
LG+ + F++G+ IGF+RGW L+LVM CV+P +AV+ ++K+L T QK AAAG VAE
Sbjct: 180 LGEALRFVCQFLTGYLIGFVRGWNLSLVMSCVMPLMAVSLTFVIKRLRDSTARSQKVYAAAGAVAE 245
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: F4PX48_CAVFA (ABC transporter B family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PX48_CAVFA) HSP 1 Score: 59.3 bits (142), Expect = 1.270e-8 Identity = 33/66 (50.00%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 198
+G + S F+SGF IG + GWQLALV+L + P LA AG M K + LT Q S A AG VAE
Sbjct: 236 VGSFLHFTSTFISGFVIGLINGWQLALVILALTPLLAAAGAFMTKMMTDLTKKGQDSYAKAGAVAE 301
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: T0PV04_SAPDV (ABC transmembrane type-1 domain-containing protein (Fragment) n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PV04_SAPDV) HSP 1 Score: 58.9 bits (141), Expect = 1.680e-8 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 198
LG+ ++ FVSG+ IGF++GW +ALVM V+P +A+ ++K+L T Q++ AAAG VAE
Sbjct: 175 LGEAVQFTCQFVSGYIIGFVKGWNVALVMCAVMPMMAITMTFLIKRLRDSTAQSQRAYAAAGAVAE 240
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Match: A0A453FYL0_AEGTS (Uncharacterized protein n=4 Tax=Triticinae TaxID=1648030 RepID=A0A453FYL0_AEGTS) HSP 1 Score: 58.9 bits (141), Expect = 1.720e-8 Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 1 LGQVIEHASMFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAAAGGVAE 198
+G++I+ S F GF + F+RGW L LVML +PP+AVAG ++L+ + L+T +Q AG + E
Sbjct: 25 VGKIIQLLSTFFGGFVVAFVRGWLLTLVMLSSIPPVAVAGAIVLRMMTTLSTKMQAKYGDAGDIVE 90 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig917.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig917.13.1 >prot_A-nodosum_M_contig917.13.1 ID=prot_A-nodosum_M_contig917.13.1|Name=mRNA_A-nodosum_M_contig917.13.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=60bp MFVSGFTIGFLRGWQLALVMLCVVPPLAVAGVVMLKKLAYLTTLIQKSTAback to top mRNA from alignment at A-nodosum_M_contig917:220027..220233- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig917.13.1 ID=mRNA_A-nodosum_M_contig917.13.1|Name=mRNA_A-nodosum_M_contig917.13.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=207bp|location=Sequence derived from alignment at A-nodosum_M_contig917:220027..220233- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig917:220027..220233- >mRNA_A-nodosum_M_contig917.13.1 ID=mRNA_A-nodosum_M_contig917.13.1|Name=mRNA_A-nodosum_M_contig917.13.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=180bp|location=Sequence derived from alignment at A-nodosum_M_contig917:220027..220233- (Ascophyllum nodosum dioecious)back to top |