prot_A-nodosum_M_contig9144.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9144.3.1
Unique Nameprot_A-nodosum_M_contig9144.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length85
Homology
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BLAST of mRNA_A-nodosum_M_contig9144.3.1 vs. uniprot
Match: A0A6H5JDL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL2_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 4.280e-18
Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 0 
Query:    1 MLPEALADRVEVRVPSADDLRHRNPLSRCSPSAVMIGAELLLER------EGLSGEPWITCTSWAEQPEVLTAALAPYVRD 75
            MLPE ++++V+VRVP+AD+L HRN  SR  PSAV +GAE+LLE        G  G  WIT   WAE PEVLT AL P++ +
Sbjct: 1024 MLPEWMSEKVDVRVPAADELNHRNRTSRGDPSAVTVGAEILLEEGAGSNDHGTKGGDWITTAQWAETPEVLTRALVPFLSE 1104
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BLAST of mRNA_A-nodosum_M_contig9144.3.1 vs. uniprot
Match: D7FHM1_ECTSI (TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHM1_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 7.860e-10
Identity = 39/92 (42.39%), Postives = 47/92 (51.09%), Query Frame = 0 
Query:    1 MLPEALADRVEVRVPSADDLRHR----------------------NPLSRCSPSAVMIGAELLLER------EGLSGEPWITCTSWAEQPEV 64
            MLPE +++RV+VRVP+AD+L HR                      N  SR  PSAV +GAE+LLE        G  G  WIT   WAE PEV
Sbjct: 1645 MLPEWMSERVDVRVPAADELNHRFVPVMKPFLEKAEKEAAALKTRNRTSRGDPSAVTVGAEMLLEEGAGSNDAGTDGGDWITTAQWAETPEV 1736
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9144.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDL2_9PHAE4.280e-1853.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHM1_ECTSI7.860e-1042.39TiTiN family member (Ttn-1) n=1 Tax=Ectocarpus sil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9144contigA-nodosum_M_contig9144:6168..6587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9144.3.1mRNA_A-nodosum_M_contig9144.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9144 5808..6644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9144.3.1 ID=prot_A-nodosum_M_contig9144.3.1|Name=mRNA_A-nodosum_M_contig9144.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=85bp
MLPEALADRVEVRVPSADDLRHRNPLSRCSPSAVMIGAELLLEREGLSGE
PWITCTSWAEQPEVLTAALAPYVRDDSPRGKSVK*
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