prot_A-nodosum_M_contig909.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig909.1.1
Unique Nameprot_A-nodosum_M_contig909.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length241
Homology
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6P0N5L4_9CYAN (Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0N5L4_9CYAN)

HSP 1 Score: 253 bits (646), Expect = 1.270e-73
Identity = 133/258 (51.55%), Postives = 170/258 (65.89%), Query Frame = 0
Query:    1 LATLRGKHPTEDPAAIASG----------------QIPEMENLFEEATVKAVIK-ANPQSAAGPSGLRYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK 241
            L TLR KHP E    IA                  +I  +E  F   TV A I+  NPQ + GPSGLR+S LQ++L  EL E +A   +++F    LP  FW LHTSANLSA+G K RP+A GD+ RR++G V CR+YG  LA++ +P GQYGVAV GG E++A  A L  ++G   L+YD  NAFNS+ R   LPALA+++P ++PYA+N+YAREPPKLL+  D G + VI SA GVQQGCNLGPLCYSAG LK+L+
Sbjct: 1115 LETLRKKHPGESQQEIAEACCEATARLSRPPPGVSRIEAVEEPFATETVTATIRRGNPQGSPGPSGLRFSLLQSSLTPELCEAIAKLCSVIFDGSHLPDSFWQLHTSANLSAIGDKCRPIAVGDLFRRIVGGVICRQYGPSLAEHFEPQGQYGVAVPGGTELLAARAFLAHQKGQCLLAYDARNAFNSMKRSAILPALADLIPPMLPYATNIYAREPPKLLYKTDSG-MAVIPSATGVQQGCNLGPLCYSAGLLKLLR 1371          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6H5KQ62_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ62_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 5.260e-63
Identity = 123/262 (46.95%), Postives = 155/262 (59.16%), Query Frame = 0
Query:    1 LATLRGKHPTEDPAAIASG------------------QIPEMENLFEEATVKAVIK-ANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK 241
            L  LR  HP EDP  IA+                    + E +  FE   +K  +K ANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+  +   Q+G  V GGVEI+A TA L  ++G T LS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G +EV+ S RGVQQGCNLG   +  G L I+K
Sbjct:   75 LEHLRNLHPNEDPDDIATAWDSSIKAAGDRIETHKIDSVAEPDEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMK 336          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6H5KGJ4_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ4_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.850e-60
Identity = 122/262 (46.56%), Postives = 154/262 (58.78%), Query Frame = 0
Query:    1 LATLRGKHPTEDPAAIASG------------------QIPEMENLFEEATVKAVIK-ANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK 241
            L  LR  HP EDP  IA+                    + E +  FE   +K  +K ANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FC +Y   +A+  +   Q+G  V GGVEI+A TA L  ++G T LS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G +EV+ S RGVQQGCNLG   +  G L I+K
Sbjct:   75 LEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCHQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMK 336          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6H5JCM0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM0_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 1.100e-59
Identity = 123/262 (46.95%), Postives = 155/262 (59.16%), Query Frame = 0
Query:    1 LATLRGKHPTEDPAAIASG------------------QIPEMENLFEEATVKAVIK-ANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK 241
            L  LR  HP EDP  IA+                    + E +  FE   +K  +K ANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+  +   Q+G  V GGVEI+A TA L  ++G T LS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G +EV+ S RGVQQGCNLG   +  G L I+K
Sbjct:   75 LEHLRNLHPNEDPDDIATAWDSSIKAAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDFFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMK 336          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6H5LN63_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LN63_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.570e-59
Identity = 123/262 (46.95%), Postives = 155/262 (59.16%), Query Frame = 0
Query:    1 LATLRGKHPTEDPAAIASG------------------QIPEMENLFEEATVKAVIK-ANPQSAAGPSGLRYSHLQAA-LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK 241
            L  LR  HP EDP  IA+                    + E +  FE   +K  +K ANPQSA GP GLR+S+LQA  + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+  +   Q+G  V GGVEI+A TA L  ++G T LS+DG NA+NS+ R   LPA+A   P +V Y  N+YAR   KLLF ++ G +EV+ S RGVQQGCNLG   +  G L I+K
Sbjct:   75 LEHLRNLHPNEDPDDIATAWDSSIKVAGDRIKTHKIDSVAEADEPFEIKFIKQTVKKANPQSAPGPDGLRFSYLQAGGMSDSFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMK 336          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6H5KSY9_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY9_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 6.230e-48
Identity = 92/184 (50.00%), Postives = 117/184 (63.59%), Query Frame = 0
Query:   59 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK 241
            + D   E LA F+  VF     LP  FW LHTSANLSALG+K RP+A G VLRR+I   FCR+Y   +A+  +   Q+G  V GGVEI+A TA L  ++G T LS+DG NA+NS+ R   LPA+A   P +  Y  N+YAR   KLLF ++ G +EV+ S RGVQQGCNLG   +  G L I+K
Sbjct:    1 MSDYFTETLADFSFKVFYYGDELPDFFWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFCRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATHTPHLAKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMK 184          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6H5K1H0_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H0_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.400e-45
Identity = 91/184 (49.46%), Postives = 117/184 (63.59%), Query Frame = 0
Query:   59 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK 241
            + D   E LA F+  VF     LP   W LHTSANLSALG+K RP+A G VLRR+I   F R+Y   +A+  +   Q+G  V GGVEI+A TA L  ++G T LS+DG NA+NS+ R   LPA+A + P +V Y  N+YAR   KLLF ++ G +EV+ S RGVQQGCNLG   +  G L I+K
Sbjct:    1 MSDSFTETLADFSFKVFYYGDELPDFLWNLHTSANLSALGEKKRPIAVGGVLRRIISGSFYRQYKGGIANIFEAANQFGGGVPGGVEIVASTAALSHQQGSTILSFDGKNAYNSMRRSSILPAVATLTPHLVKYFGNIYARTKAKLLFKMEDGSIEVVLSQRGVQQGCNLGGFGFCVGLLDIMK 184          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6H5L3H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H3_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 2.680e-42
Identity = 81/166 (48.80%), Postives = 106/166 (63.86%), Query Frame = 0
Query:   59 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQ 223
            + D+  E LA F+  VF     LP +FW   TSA+LSALG+K RP+A G VLRR+I   FCR+Y + +AD  +   Q+G  V GGVEI+A TA L  ++G T LS+DG NA+NSI R   L A+A   P +V Y  NLYAR   KLLF ++ G +E++ S R VQQ
Sbjct:    1 MSDDFSETLADFSYKVFYYGDELPDLFWGFQTSASLSALGEKKRPIAVGGVLRRIISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAALSHQQGSTILSFDGRNAYNSILRSSILTAVATHTPHLVKYFGNLYARIKAKLLFKMEDGSIEMVRSQREVQQ 166          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A836CHA2_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 6.290e-30
Identity = 96/275 (34.91%), Postives = 130/275 (47.27%), Query Frame = 0
Query:    1 LATLRGKHPTEDP--------------AAIASGQIPEMENLFEEA-----TVKAVIKANPQSAAGPSGLRYSHLQAALC-----DELVEDLAAFATLVFSSRV-LPQVFWTLHTSANLSALGQ-------KARPVACGDVLRR--VIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREPPKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK 241
             A +  KHP   P              AA A+    E++ L E+        K + +A+P   AGPSGLRYSHLQ AL       ++   L  +  LV      +P  FW LH +A L+ L +       K RP+ACG+VL+R  V  +V+       LA+ LQP GQYGVAV  G E  A    L +E G    + D  NAFN++        +A  +P ++ Y    Y R  P+LLF    G +  I S RGV+QG  LGP+ +  G    LK
Sbjct: 2431 FAAMEAKHPAAAPGEAAAELANMAAQVAATAAPMPAELQLLREDGICGDTVAKCIQRASPYRRAGPSGLRYSHLQDALRTTWGKQQMSLTLVRWIELVMRDAARIPDDFWQLHAAARLTPLTERQADGTPKLRPIACGEVLQRLPVCTSVYVGERKGFLAELLQPDGQYGVAVSAGAEKAALAGKLAYELGHWQFNVDLRNAFNALKVTAAAKWVAAQLPDLLNYFLATYMRNRPQLLFQHADGSVRTIASQRGVKQGGPLGPVLFCGGIADCLK 2705          
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Match: A0A6H5KQE6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE6_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 5.610e-25
Identity = 62/137 (45.26%), Postives = 81/137 (59.12%), Query Frame = 0
Query:   59 LCDELVEDLAAFATLVFS-SRVLPQVFWTLHTSANLSALGQKARPVACGDVLRRVI------------GAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTATLGFEEGCTNLSYDGANAFNSIYRHRFLPALA 182
            + D+    LA F+  VF     LP +FW LHTSA+LSALG+K RP+A G VLRR+I               FCR+Y + +AD  +   Q+G  V GGVEI+A TA    ++G T LS+DG NA+NSI R   L A+A
Sbjct:    1 MSDDFSATLADFSHKVFYYGDELPDLFWGLHTSASLSALGEKKRPIAVGGVLRRIIXIXXXXXXXXXISGSFCRQYKQGIADIFEASNQFGGGVPGGVEIVASTAAPSHQQGSTILSFDGKNAYNSILRSSILTAVA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig909.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0N5L4_9CYAN1.270e-7351.55Patatin-like protein n=1 Tax=Moorena sp. SIO3C2 Ta... [more]
A0A6H5KQ62_9PHAE5.260e-6346.95Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KGJ4_9PHAE2.850e-6046.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JCM0_9PHAE1.100e-5946.95Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LN63_9PHAE1.570e-5946.95Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSY9_9PHAE6.230e-4850.00Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1H0_9PHAE2.400e-4549.46Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L3H3_9PHAE2.680e-4248.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CHA2_9STRA6.290e-3034.91Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQE6_9PHAE5.610e-2545.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig909contigA-nodosum_M_contig909:22879..23693 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig909.1.1mRNA_A-nodosum_M_contig909.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig909 22879..23693 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig909.1.1 ID=prot_A-nodosum_M_contig909.1.1|Name=mRNA_A-nodosum_M_contig909.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=241bp
LATLRGKHPTEDPAAIASGQIPEMENLFEEATVKAVIKANPQSAAGPSGL
RYSHLQAALCDELVEDLAAFATLVFSSRVLPQVFWTLHTSANLSALGQKA
RPVACGDVLRRVIGAVFCRRYGRKLADYLQPWGQYGVAVFGGVEIMAFTA
TLGFEEGCTNLSYDGANAFNSIYRHRFLPALAEIVPSVVPYASNLYAREP
PKLLFALDGGGLEVIESARGVQQGCNLGPLCYSAGSLKILK
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