prot_A-nodosum_M_contig894.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig894.10.1
Unique Nameprot_A-nodosum_M_contig894.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length74
Homology
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: D7G7W3_ECTSI (Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W3_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.980e-39
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 73
            MVGPIVDEVI  +G KLKVLELCTDENPKTV +FKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL
Sbjct:   40 MVGPIVDEVIADHGGKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 112          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: A0A6H5L318_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L318_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.450e-38
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 73
            MVGPIVDEVI  +G+KLKVLELCTDENPKTV +FKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL
Sbjct:  119 MVGPIVDEVIADHGSKLKVLELCTDENPKTVAEFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMDL 191          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: A0A1B7W1G5_APHFL (Thioredoxin n=5 Tax=Nostocales TaxID=1161 RepID=A0A1B7W1G5_APHFL)

HSP 1 Score: 90.5 bits (223), Expect = 6.010e-22
Identity = 40/71 (56.34%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHM 71
            MVGP+VDE+ DQYG KLKV+++ TDENP+    + IR+IPTLM+F D + V  VVGAVPK+ L ++++KH+
Sbjct:   37 MVGPVVDEIADQYGEKLKVVKVNTDENPQIASQYGIRSIPTLMIFKDGQKVDMVVGAVPKTTLSTTVEKHL 107          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: A0A1C9CAY7_9FLOR (Thioredoxin n=2 Tax=Ahnfeltia TaxID=28022 RepID=A0A1C9CAY7_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 1.540e-21
Identity = 36/72 (50.00%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMD 72
            M+ P++DE+ D+YG  +KV+++ TD+NP T  ++ IR+IPTLM+F+D K V TV+GAVPKS L S++ K+++
Sbjct:   30 MIAPVIDEIADEYGQSIKVVKINTDDNPSTATEYGIRSIPTLMIFNDGKRVDTVIGAVPKSTLASTLNKYLN 101          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: A0A835Z2A8_9STRA (Putative thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2A8_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.890e-21
Identity = 37/71 (52.11%), Postives = 58/71 (81.69%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHM 71
            MV P+VDEV+ +YG  ++V+E+ TDENP+ V + K+R++PTL+LF   K+ +TVVGA+PK+ALV +++KH+
Sbjct:    1 MVSPVVDEVLSEYGNVMRVVEVSTDENPECVAECKVRSVPTLILFDKGKAEVTVVGAIPKNALVHALRKHL 71          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: UPI001BEECA3D (thioredoxin n=1 Tax=Pseudoerythrocladia kornmannii TaxID=753682 RepID=UPI001BEECA3D)

HSP 1 Score: 89.0 bits (219), Expect = 2.370e-21
Identity = 39/72 (54.17%), Postives = 56/72 (77.78%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMD 72
            MVGP+VDE+ ++Y   +KV+++ TDENP  V ++ IR+IPTLM+F D K V TV+GAVPKS L S+I K+++
Sbjct:   38 MVGPVVDEIANEYQKSIKVVKINTDENPSVVTEYSIRSIPTLMIFKDGKRVDTVIGAVPKSTLASTIDKYLN 109          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: A0A1C9CEJ9_9RHOD (Thioredoxin n=2 Tax=Erythrotrichiaceae TaxID=240428 RepID=A0A1C9CEJ9_9RHOD)

HSP 1 Score: 87.8 bits (216), Expect = 6.780e-21
Identity = 39/72 (54.17%), Postives = 56/72 (77.78%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMD 72
            MVGP+VDE+ D Y   +KV+++ TDENP  V ++ IR+IPTLM+F + K V TV+GAVPKS L S+I+K+++
Sbjct:   38 MVGPVVDEIADDYQNLIKVVKINTDENPTVVTEYSIRSIPTLMIFKNGKKVDTVIGAVPKSTLASTIEKYLN 109          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: A0A1G4NTQ2_9FLOR (Thioredoxin n=13 Tax=Nemaliales TaxID=2807 RepID=A0A1G4NTQ2_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 4.000e-20
Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHMD 72
            MV P+VDE+  +Y   +KV++L TDENP T  ++ IR+IPTLM+F D   V TV+GAVPKS L S++ K++D
Sbjct:   36 MVAPVVDEIAHEYSESIKVVKLNTDENPSTATEYGIRSIPTLMIFKDGGRVDTVIGAVPKSTLASTLNKYLD 107          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: A0A2W7B911_9CYAN (Thioredoxin n=1 Tax=Snowella sp. TaxID=2164131 RepID=A0A2W7B911_9CYAN)

HSP 1 Score: 85.1 bits (209), Expect = 7.430e-20
Identity = 35/71 (49.30%), Postives = 57/71 (80.28%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHM 71
            +VGP+VDE+ +QY  ++KV+++ TDENP T  ++ IR+IPTLM+F D + V T+VGAVPK+ L +++++H+
Sbjct:   37 LVGPVVDEIAEQYKGQVKVVKVNTDENPNTASNYGIRSIPTLMIFKDGQKVGTIVGAVPKTTLATTLEQHI 107          
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Match: A0A342RZP1_9FLOR (Thioredoxin n=1 Tax=Mastocarpus papillatus TaxID=31436 RepID=A0A342RZP1_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 1.140e-19
Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    1 MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKSVMTVVGAVPKSALVSSIKKHM 71
            M+ P+VDE+ D+Y   +KV+++ TDENP    ++ IR+IPTLM+F   K V TV+GAVPKS L S+++KH+
Sbjct:    1 MIAPVVDEISDEYADSIKVVKINTDENPSAATEYGIRSIPTLMIFIAGKRVDTVIGAVPKSTLASTLQKHL 71          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig894.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7W3_ECTSI1.980e-3991.78Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5L318_9PHAE1.450e-3891.78Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A1B7W1G5_APHFL6.010e-2256.34Thioredoxin n=5 Tax=Nostocales TaxID=1161 RepID=A0... [more]
A0A1C9CAY7_9FLOR1.540e-2150.00Thioredoxin n=2 Tax=Ahnfeltia TaxID=28022 RepID=A0... [more]
A0A835Z2A8_9STRA1.890e-2152.11Putative thioredoxin n=1 Tax=Tribonema minus TaxID... [more]
UPI001BEECA3D2.370e-2154.17thioredoxin n=1 Tax=Pseudoerythrocladia kornmannii... [more]
A0A1C9CEJ9_9RHOD6.780e-2154.17Thioredoxin n=2 Tax=Erythrotrichiaceae TaxID=24042... [more]
A0A1G4NTQ2_9FLOR4.000e-2052.78Thioredoxin n=13 Tax=Nemaliales TaxID=2807 RepID=A... [more]
A0A2W7B911_9CYAN7.430e-2049.30Thioredoxin n=1 Tax=Snowella sp. TaxID=2164131 Rep... [more]
A0A342RZP1_9FLOR1.140e-1950.70Thioredoxin n=1 Tax=Mastocarpus papillatus TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..72
e-value: 8.9E-14
score: 53.5
NoneNo IPR availablePANTHERPTHR45663GEO12009P1coord: 1..70
NoneNo IPR availableCDDcd02947TRX_familycoord: 1..68
e-value: 8.70336E-14
score: 58.3385
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 2..69
e-value: 7.7E-11
score: 41.9
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig894contigA-nodosum_M_contig894:199576..199797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig894.10.1mRNA_A-nodosum_M_contig894.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig894 198934..199813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig894.10.1 ID=prot_A-nodosum_M_contig894.10.1|Name=mRNA_A-nodosum_M_contig894.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=74bp
MVGPIVDEVIDQYGAKLKVLELCTDENPKTVQDFKIRNIPTLMLFSDRKS
VMTVVGAVPKSALVSSIKKHMDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf