prot_A-nodosum_M_contig892.19.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig892.19.1
Unique Nameprot_A-nodosum_M_contig892.19.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length276
Homology
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE)

HSP 1 Score: 446 bits (1146), Expect = 1.770e-155
Identity = 220/265 (83.02%), Postives = 241/265 (90.94%), Query Frame = 0
Query:    8 RELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAADG 272
            RELVVYNHMGPVRS AFAEG QRFATVSDPFTDSPGLISVFE PD+VPTDQL+KIASLEI++PPKMKAT VVWGA+NEKLIVSY DGT+RTFDP D TEL+YAQV       H +DINRL  NKDRTLLLT SKDYT+KLL+A+TL+VLKTYKTDRPVNA++MHP+KEHVILGGGQDAMSVTTTSS+VGKFE+RFFHMIYE EFGRVKGHFGPIN LA+NPNGLS+ASG+EDGYVRLHFFDEDYLN QDE+PDELEEG K AA G
Sbjct:   85 RELVVYNHMGPVRSVAFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLDKIASLEIDLPPKMKATTVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV-------HSQDINRLCINKDRTLLLTSSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGSEDGYVRLHFFDEDYLNMQDEVPDELEEGSKAAAGG 342          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA)

HSP 1 Score: 356 bits (914), Expect = 3.470e-120
Identity = 169/271 (62.36%), Postives = 212/271 (78.23%), Query Frame = 0
Query:    1 MWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAAD 271
            +WDVQTG  LV Y H GPVRS  +AEG Q+F + S PF DSPG IS+++TP +V   Q +++AS EI +P K K T+V+W A+N++++ S+ DGT+R FDP +  EL            H K I+R+Y + DRTLLLTCSKDYTAKLL+ADTLEVLK Y T+RPVNAA++HP+K+H++LGGGQDAMSVTTT S VGKFE RF+HMIYEEEFGRVKGHFGPIN LA+NP+GLS+ SGAEDGY+RLH FD +Y++KQDE+PDELEE  +  AD
Sbjct:   78 LWDVQTGESLVSYPHRGPVRSVCWAEGGQKFVSASQPFMDSPGFISIYDTPSDVDPSQYQQVASREISIPNKEKCTEVLWSALNDRILASFEDGTIRVFDP-ETGELLSTSTP------HSKPISRMYLSTDRTLLLTCSKDYTAKLLDADTLEVLKVYPTERPVNAAVIHPTKDHILLGGGQDAMSVTTTGSRVGKFETRFYHMIYEEEFGRVKGHFGPINALAINPDGLSYCSGAEDGYIRLHHFDREYVDKQDEVPDELEELDETEAD 341          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: D8LIC2_ECTSI (Eukaryotic initiation factor eIF3 i subunit p36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC2_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 1.060e-111
Identity = 163/198 (82.32%), Postives = 181/198 (91.41%), Query Frame = 0
Query:    1 MWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGE---DGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSV 195
            MWDVQTGRELVVYNHMGPVRS +FAEG QRFATVSDPFTDSPGLISVFE PD+VPTDQLEKIA LEI++PPKMKATKVVWGA+NEKLIV+Y DGT+RTFDP D TEL+YAQV   +    G+H KDINRL  NKDRTLLLTCSKDYT+KLL+A+TL+VLKTYKTDRPVNA++MHP+KEHVILGGGQDAMSVTTTSS+V
Sbjct:   78 MWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVAYADGTIRTFDPFDGTELEYAQVGTRQGRSSGVHSKDINRLCINKDRTLLLTCSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTSSNV 275          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A1Z5K121_FISSO (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K121_FISSO)

HSP 1 Score: 284 bits (727), Expect = 9.450e-92
Identity = 143/267 (53.56%), Postives = 190/267 (71.16%), Query Frame = 0
Query:    1 MWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELE 263
            +WDV+TG  + V+NH GPVR  A+AEG+Q F T+SDPF D P  I VF+ P++           LEIE+P      +K T V W A+NE L+V++ +G +R +DP +  +L      K E   H+K INRL  N+++TL +T S D+T+KL +   L+ LKTY+TDRPVN A++   K+H++LGGGQ+AMSVTTTS  VGKFE RFF+++YE+EFG VKGHFGPIN L +NPNG S+ASGAEDGYVRLHFFD+DYL K+D +P+E E
Sbjct:   78 LWDVRTGECIFVFNHKGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYTDPPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDP-ETGDL------KEEITAHEKKINRLRFNREKTLFITSSADFTSKLYDPVDLKHLKTYRTDRPVNDAVISEQKDHILLGGGQEAMSVTTTSGKVGKFETRFFNLVYEDEFGIVKGHFGPINALDINPNGRSYASGAEDGYVRLHFFDKDYLEKKDPVPEEDE 337          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.620e-91
Identity = 141/276 (51.09%), Postives = 189/276 (68.48%), Query Frame = 0
Query:    1 MWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMK-----ATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAAD 271
            +W +  G+ +  Y H GPVR  A+A G Q FAT+SDPF + PG ISVF  P +   +Q  +   LEIE+P   K     AT VVW  +NE + V++ +G +R +DP +  EL+  Q        H+K INR+  N+++T+ +T S D+TAKL +   LE LKTY+TDRPVN A++ P+K+H++LGGGQ+AMSVTTT+  VGKFE RFFH++YEEEFG VKGHFGPIN L +NPNGLS+ASGAEDGY+RLHFFD+ Y+  +D +P+  E    D  D
Sbjct:   78 LWSICDGQIIRDYPHRGPVRGVAWAAGGQMFATISDPFVEHPGYISVFAVPKSESPEQWSEKPILEIELPKNNKGQRVNATNVVWLNLNEAIFVTFDNGCIRLYDPENGEELEEIQP-------HEKKINRVSFNRNKTMFITSSADFTAKLYDVVELEHLKTYQTDRPVNDAVISPTKDHILLGGGQEAMSVTTTAGKVGKFETRFFHLVYEEEFGIVKGHFGPINALDINPNGLSYASGAEDGYIRLHFFDKSYIEMKDPVPEVNETDDDDEED 346          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A6V2RRW4_HETAK (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RRW4_HETAK)

HSP 1 Score: 278 bits (710), Expect = 2.650e-89
Identity = 139/271 (51.29%), Postives = 188/271 (69.37%), Query Frame = 0
Query:    1 MWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAAD 271
            MWDV+TG E   +NH GPVRS  +AEG Q F +VSDPF +SP  +SV++ PD+   +Q+EKI  LEI++  K       +   N++++V+  DG++R +D    T  Q  QV       H + I  ++ NK+R+L+LT S D  +KL++ D +EV+K YKTDRPVNA  + P K+HV++GGGQDAMSVTTT S  GKFE RF+H I EEEFGRVKGHFGP+N L V+P G  FASGAEDGYVRLH +D++YL+K D +P++ EEG  D+ +
Sbjct:   78 MWDVETGVETCTFNHKGPVRSVRWAEGCQAFVSVSDPFMESPPFVSVYDCPDDADPEQIEKIPRLEIQLD-KKSTGGAHFIKENKEILVAMEDGSIRIYDA--ETGEQIHQVKH-----HTQKIQTVFFNKERSLMLTGSADTWSKLIDLDNMEVIKQYKTDRPVNAVAISPDKDHVLMGGGQDAMSVTTTGSKAGKFETRFYHAIAEEEFGRVKGHFGPVNALGVDPRGRGFASGAEDGYVRLHHYDQEYLDKTDPVPEDFEEGEVDSEE 340          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7S4NJI3_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NJI3_9STRA)

HSP 1 Score: 277 bits (709), Expect = 1.330e-88
Identity = 136/267 (50.94%), Postives = 187/267 (70.04%), Query Frame = 0
Query:   10 LVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP-----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAAD 271
            L+ + H GPVR  AFA+G+Q FA++SDPF D    IS+++ P++      +    LEI++P      ++  T +VW  +NE L V++ +G +R +DP+   EL+       E   H+K INR+  NKD+TL +T S D+T+KL +   LE LKTYKTDRPVN A++   K+H++LGGGQ+AMSVTTT+  VGKFE RFFH++YEEEFG VKGHFGPIN L +NPNG ++ASGAEDGYVRLHFFD+ YL+ +D +P+E E+G +  AD
Sbjct:  123 LMDFKHHGPVRGVAFAQGSQMFASISDPFVDHNAQISIYDIPEDEDPSTYDDTPRLEIDLPKMPDGKRVNPTNIVWLNLNEALFVTFDNGAVRLYDPVTGDELE-------EIFPHEKKINRVSFNKDKTLFITSSADFTSKLYDVVDLEHLKTYKTDRPVNDAVISEKKDHILLGGGQEAMSVTTTAGKVGKFETRFFHLVYEEEFGSVKGHFGPINALDINPNGRNYASGAEDGYVRLHFFDKSYLDMKDPVPEEPEDGEEKVAD 382          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A6U3VY90_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Thalassiosirales TaxID=33847 RepID=A0A6U3VY90_9STRA)

HSP 1 Score: 275 bits (703), Expect = 4.400e-88
Identity = 136/259 (52.51%), Postives = 182/259 (70.27%), Query Frame = 0
Query:   15 HMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP-----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKD 268
            H GPVR  A+A+G+  FAT+SDPF +    ISV++ P+N           LEI++P      ++ AT +VW  +NE L V++ +G++R +DP    EL        E   H+K INR+  N D+TL +T S D+TAKL +   L+ LKTYKTDRPVN A++  +K+H++LGGGQ+AMSVTTTS  VGKFE RFFH++YEEEFG VKGHFGPIN LA+NPNG S+ASGAEDGY+RLH+FD+ YL+ +D +P+ LEEG +D
Sbjct:   92 HHGPVRGAAWADGSNMFATISDPFVEHNAQISVYDVPENDDPSSYSDSPRLEIDLPKTSDGKRVNATNIVWLNLNEALFVTFDNGSIRLYDPATGEELD-------EFYPHEKKINRVSFNSDKTLFITSSADFTAKLYDVVDLKHLKTYKTDRPVNDAVISETKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGSVKGHFGPINALAINPNGRSYASGAEDGYIRLHYFDKSYLDMKDPVPEVLEEGEED 343          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7S2I7B8_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I7B8_9STRA)

HSP 1 Score: 272 bits (696), Expect = 5.500e-87
Identity = 132/266 (49.62%), Postives = 185/266 (69.55%), Query Frame = 0
Query:   10 LVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP-----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAA 270
            + V++H GPVR  A+A+G+  FAT+SDPF D    IS+++ P +      +    LEI++P      ++  T +VW  +NE L V++ +G++R +D +   EL+       E   H+K INR+  N+++TL +T S D+TAKL +   L  LKTYKT+RPVN A++HP+K+H++LGGGQ+AMSVTTT   VGKFE RFFH++YEEEFG+VKGHFGPIN L VNPNG S+ASGAEDGYVRLHFFD+ YL+ +D +P+  E G ++  
Sbjct:   87 IKVFSHRGPVRGVAWADGSNSFATISDPFVDHNAQISIYDVPQDESPSDYDDTPRLEIDLPKTNDGKRVNPTNIVWLNLNEALFVTFDNGSIRLYDTVTGDELE-------EIFPHEKKINRVSFNQEKTLFITSSADFTAKLYDVVNLHHLKTYKTERPVNDAVIHPTKDHILLGGGQEAMSVTTTRGDVGKFETRFFHLVYEEEFGKVKGHFGPINALGVNPNGRSYASGAEDGYVRLHFFDKSYLDMKDPVPEAPEGGEEEEG 345          
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7S1DBX8_CYCTE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DBX8_CYCTE)

HSP 1 Score: 270 bits (690), Expect = 3.460e-86
Identity = 134/260 (51.54%), Postives = 179/260 (68.85%), Query Frame = 0
Query:   13 YNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP-----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHK 267
            Y H GPVR  A++EG   FAT+SDPF D    ISVF++P      Q  +   LEI++P      ++  T + W  +NE L+V + +GT+R +DP    E++       E   H K INR+  N ++TL +T S D+T+KL +   ++  KTYKTDRPVN A++  +K+H++LGGGQ+AMSVTTTS  VGKFE RFFH++YEEEFG VKGHFGPIN LA+NPNG SFASGAEDGYVRLHFFD+ Y++ +D +P+E EEG +
Sbjct:   89 YTHRGPVRGVAWSEGGHMFATISDPFVDHNAKISVFDSPRGEHPSQYPEAPRLEIDLPKDHSNKRVNPTNIDWMPLNESLMVCFDNGTIRLYDPHTGDEME-------EIVAHDKKINRVRFNLEKTLFITSSADFTSKLFDVVDMKHHKTYKTDRPVNDAVLSETKDHILLGGGQEAMSVTTTSGKVGKFETRFFHLVYEEEFGTVKGHFGPINALAINPNGRSFASGAEDGYVRLHFFDKSYIDMKDPVPEEPEEGEE 341          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMX5_9PHAE1.770e-15583.02Eukaryotic translation initiation factor 3 subunit... [more]
A0A835ZF13_9STRA3.470e-12062.36Eukaryotic translation initiation factor 3 subunit... [more]
D8LIC2_ECTSI1.060e-11182.32Eukaryotic initiation factor eIF3 i subunit p36 n=... [more]
A0A1Z5K121_FISSO9.450e-9253.56Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2NVM0_9STRA1.620e-9151.09Eukaryotic translation initiation factor 3 subunit... [more]
A0A6V2RRW4_HETAK2.650e-8951.29Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4NJI3_9STRA1.330e-8850.94Eukaryotic translation initiation factor 3 subunit... [more]
A0A6U3VY90_9STRA4.400e-8852.51Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2I7B8_9STRA5.500e-8749.62Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1DBX8_CYCTE3.460e-8651.54Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 58..100
e-value: 90.0
score: 4.7
coord: 207..246
e-value: 0.08
score: 22.1
coord: 108..149
e-value: 16.0
score: 9.5
coord: 6..49
e-value: 17.0
score: 9.3
coord: 152..190
e-value: 240.0
score: 2.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 213..244
e-value: 0.0059
score: 17.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 214..244
score: 9.171722
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..271
e-value: 5.7E-68
score: 231.5
NoneNo IPR availablePANTHERPTHR19877:SF1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Icoord: 1..255
NoneNo IPR availablePANTHERPTHR19877EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Icoord: 1..255
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig892contigA-nodosum_M_contig892:226010..230069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig892.19.1mRNA_A-nodosum_M_contig892.19.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig892 224857..233124 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig892.19.1 ID=prot_A-nodosum_M_contig892.19.1|Name=mRNA_A-nodosum_M_contig892.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=276bp
MWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFET
PDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFD
PLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNA
DTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEA
RFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDED
YLNKQDEIPDELEEGHKDAADGVGM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf