mRNA_A-nodosum_M_contig892.19.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A6H5KMX5_9PHAE (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX5_9PHAE) HSP 1 Score: 540 bits (1392), Expect = 1.330e-185 Identity = 270/348 (77.59%), Postives = 293/348 (84.20%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAADG 1047
RPILLKGHERAITCVVYNNDGDLVFTA+KDQIP+LWYAKTGERIGTYQGHQG RELVVYNHMGPVRS AFAEG QRFATVSDPFTDSPGLISVFE PD+VPTDQL+KIASLEI++PPKMKAT VVWGA+NEKLIVSY DGT+RTFDP D TEL+YAQV H +DINRL NKDRTLLLT SKDYT+KLL+A+TL+VLKTYKTDRPVNA++MHP+KEHVILGGGQDAMSVTTTSS+VGKFE+RFFHMIYE EFGRVKGHFGPIN LA+NPNGLS+ASG+EDGYVRLHFFDEDYLN QDE+PDELEEG K AA G
Sbjct: 2 RPILLKGHERAITCVVYNNDGDLVFTASKDQIPSLWYAKTGERIGTYQGHQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELVVYNHMGPVRSVAFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLDKIASLEIDLPPKMKATTVVWGALNEKLIVSYADGTIRTFDPYDGTELEYAQV-------HSQDINRLCINKDRTLLLTSSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTSSNVGKFESRFFHMIYETEFGRVKGHFGPINALAINPNGLSYASGSEDGYVRLHFFDEDYLNMQDEVPDELEEGSKAAAGG 342
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: D8LIC2_ECTSI (Eukaryotic initiation factor eIF3 i subunit p36 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC2_ECTSI) HSP 1 Score: 483 bits (1244), Expect = 3.290e-164 Identity = 235/274 (85.77%), Postives = 257/274 (93.80%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGE---DGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSV 816
RPILLKGHERAITCVVYNNDGDLVFTAAKDQIP+LWYAKTGERIGTYQGHQGAVWDLSV+WDSTR++SASADASARMWDVQTGRELVVYNHMGPVRS +FAEG QRFATVSDPFTDSPGLISVFE PD+VPTDQLEKIA LEI++PPKMKATKVVWGA+NEKLIV+Y DGT+RTFDP D TEL+YAQV + G+H KDINRL NKDRTLLLTCSKDYT+KLL+A+TL+VLKTYKTDRPVNA++MHP+KEHVILGGGQDAMSVTTTSS+V
Sbjct: 2 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPSLWYAKTGERIGTYQGHQGAVWDLSVSWDSTRMLSASADASARMWDVQTGRELVVYNHMGPVRSVSFAEGGQRFATVSDPFTDSPGLISVFEAPDDVPTDQLEKIACLEIDLPPKMKATKVVWGALNEKLIVAYADGTIRTFDPFDGTELEYAQVGTRQGRSSGVHSKDINRLCINKDRTLLLTCSKDYTSKLLDANTLQVLKTYKTDRPVNASVMHPTKEHVILGGGQDAMSVTTTSSNV 275
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A835ZF13_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF13_9STRA) HSP 1 Score: 476 bits (1226), Expect = 1.660e-160 Identity = 226/347 (65.13%), Postives = 276/347 (79.54%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAAD 1044
RPILLK HERAITCV+YN DGDLVFTAAKD +PT+W A TGER+GTY GH GAVW+LS WDS L+SASADA+ R+WDVQTG LV Y H GPVRS +AEG Q+F + S PF DSPG IS+++TP +V Q +++AS EI +P K K T+V+W A+N++++ S+ DGT+R FDP + EL H K I+R+Y + DRTLLLTCSKDYTAKLL+ADTLEVLK Y T+RPVNAA++HP+K+H++LGGGQDAMSVTTT S VGKFE RF+HMIYEEEFGRVKGHFGPIN LA+NP+GLS+ SGAEDGY+RLH FD +Y++KQDE+PDELEE + AD
Sbjct: 2 RPILLKSHERAITCVIYNADGDLVFTAAKDNVPTVWRADTGERLGTYIGHSGAVWELSCRWDSKYLLSASADATVRLWDVQTGESLVSYPHRGPVRSVCWAEGGQKFVSASQPFMDSPGFISIYDTPSDVDPSQYQQVASREISIPNKEKCTEVLWSALNDRILASFEDGTIRVFDP-ETGELLSTSTP------HSKPISRMYLSTDRTLLLTCSKDYTAKLLDADTLEVLKVYPTERPVNAAVIHPTKDHILLGGGQDAMSVTTTGSRVGKFETRFYHMIYEEEFGRVKGHFGPINALAINPDGLSYCSGAEDGYIRLHHFDREYVDKQDEVPDELEELDETEAD 341
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A6V2RRW4_HETAK (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RRW4_HETAK) HSP 1 Score: 397 bits (1019), Expect = 2.040e-129 Identity = 192/347 (55.33%), Postives = 254/347 (73.20%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAAD 1044
RPILLKGHER+IT V+YN DGDL+FTA+KD +P++WY++ GERIGTY GH GAVWDL +WDSTRL+S SADA+ +MWDV+TG E +NH GPVRS +AEG Q F +VSDPF +SP +SV++ PD+ +Q+EKI LEI++ K + N++++V+ DG++R +D T Q QV H + I ++ NK+R+L+LT S D +KL++ D +EV+K YKTDRPVNA + P K+HV++GGGQDAMSVTTT S GKFE RF+H I EEEFGRVKGHFGP+N L V+P G FASGAEDGYVRLH +D++YL+K D +P++ EEG D+ +
Sbjct: 2 RPILLKGHERSITKVLYNRDGDLIFTASKDSVPSVWYSENGERIGTYHGHVGAVWDLDCSWDSTRLLSGSADATVKMWDVETGVETCTFNHKGPVRSVRWAEGCQAFVSVSDPFMESPPFVSVYDCPDDADPEQIEKIPRLEIQLD-KKSTGGAHFIKENKEILVAMEDGSIRIYDA--ETGEQIHQVKH-----HTQKIQTVFFNKERSLMLTGSADTWSKLIDLDNMEVIKQYKTDRPVNAVAISPDKDHVLMGGGQDAMSVTTTGSKAGKFETRFYHAIAEEEFGRVKGHFGPVNALGVDPRGRGFASGAEDGYVRLHHYDQEYLDKTDPVPEDFEEGEVDSEE 340
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7S2NVM0_9STRA (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NVM0_9STRA) HSP 1 Score: 380 bits (976), Expect = 6.410e-123 Identity = 185/352 (52.56%), Postives = 248/352 (70.45%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMK-----ATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAAD 1044
RPILLKGHER+IT V YN DGDL+FTA+KD +P++W A+ G R+GT+ GH+G +WDL +T L+SASAD + ++W + G+ + Y H GPVR A+A G Q FAT+SDPF + PG ISVF P + +Q + LEIE+P K AT VVW +NE + V++ +G +R +DP + EL+ Q H+K INR+ N+++T+ +T S D+TAKL + LE LKTY+TDRPVN A++ P+K+H++LGGGQ+AMSVTTT+ VGKFE RFFH++YEEEFG VKGHFGPIN L +NPNGLS+ASGAEDGY+RLHFFD+ Y+ +D +P+ E D D
Sbjct: 2 RPILLKGHERSITVVKYNRDGDLLFTASKDHVPSVWRAEDGSRLGTFNGHKGTIWDLDSDSTTTYLLSASADTTVKLWSICDGQIIRDYPHRGPVRGVAWAAGGQMFATISDPFVEHPGYISVFAVPKSESPEQWSEKPILEIELPKNNKGQRVNATNVVWLNLNEAIFVTFDNGCIRLYDPENGEELEEIQP-------HEKKINRVSFNRNKTMFITSSADFTAKLYDVVELEHLKTYQTDRPVNDAVISPTKDHILLGGGQEAMSVTTTAGKVGKFETRFFHLVYEEEFGIVKGHFGPINALDINPNGLSYASGAEDGYIRLHFFDKSYIEMKDPVPEVNETDDDDEED 346
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7R9YCC7_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCC7_9STRA) HSP 1 Score: 381 bits (978), Expect = 1.800e-122 Identity = 185/339 (54.57%), Postives = 249/339 (73.45%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPPKMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELE 1020
RPILLKGHERA+T V YN DGDL+F+AAKD PT+WYA TG R+GT+ GHQGAVWDL V++DS+RL++ASADA+ R+W+V+TGREL Y+H GPVR+ A+AEG Q FAT ++PF PG I+V+ P + I + E+PP+++A+++ W N++++++Y DG+LR D EL + IH+ I + + D+TLL+T S D ++KLL+A TLEVL+T++TDRPVNAA + P +EHVI+GGGQDAMSVTTT+ GKFEARF+HM Y EEFGRVKGHFGPIN + +NP+G S+ASG EDGY+RLH FD Y D +P++ +
Sbjct: 40 RPILLKGHERALTRVKYNADGDLLFSAAKDPKPTVWYADTGVRLGTFNGHQGAVWDLDVSYDSSRLLTASADATVRLWEVRTGRELCQYDHSGPVRAVAWAEGCQYFATAAEPFGKHPGQIAVYYCPSDAEEYDQLPIENRVFEIPPEVRASQIAWLNNNKEILIAYDDGSLRILDAEYGDELH-------KFNIHKHRIMDMQFSIDKTLLITASYDTSSKLLDATTLEVLETFQTDRPVNAAALSPIREHVIIGGGQDAMSVTTTAGQQGKFEARFYHMWYAEEFGRVKGHFGPINAIGINPDGRSYASGGEDGYIRLHHFDPSYFAIADPVPEDFD 371
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A1Z5K121_FISSO (Eukaryotic translation initiation factor 3 subunit I n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K121_FISSO) HSP 1 Score: 379 bits (973), Expect = 2.140e-122 Identity = 187/343 (54.52%), Postives = 248/343 (72.30%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELE 1020
RP LL+GHER IT V +N+DGDL+FTA+KD +P++W + GER+GTY GH+G VWDL + RL++ASAD S R+WDV+TG + V+NH GPVR A+AEG+Q F T+SDPF D P I VF+ P++ LEIE+P +K T V W A+NE L+V++ +G +R +DP + +L K E H+K INRL N+++TL +T S D+T+KL + L+ LKTY+TDRPVN A++ K+H++LGGGQ+AMSVTTTS VGKFE RFF+++YE+EFG VKGHFGPIN L +NPNG S+ASGAEDGYVRLHFFD+DYL K+D +P+E E
Sbjct: 2 RPYLLQGHERPITTVQFNHDGDLLFTASKDLVPSVWRVENGERLGTYNGHKGTVWDLDCDRFTKRLLTASADTSCRLWDVRTGECIFVFNHKGPVRGVAWAEGSQMFVTISDPFVDHPAKICVFDAPEDQDPSTYTDPPRLEIELPKINGKVVKPTHVHWTALNEDLLVAFDNGQIRLYDP-ETGDL------KEEITAHEKKINRLRFNREKTLFITSSADFTSKLYDPVDLKHLKTYRTDRPVNDAVISEQKDHILLGGGQEAMSVTTTSGKVGKFETRFFNLVYEDEFGIVKGHFGPINALDINPNGRSYASGAEDGYVRLHFFDKDYLEKKDPVPEEDE 337
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7S4NJI3_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NJI3_9STRA) HSP 1 Score: 363 bits (933), Expect = 5.890e-116 Identity = 177/352 (50.28%), Postives = 242/352 (68.75%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP-----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAAD 1044
RPILLKGHER+IT V YN+DGDL+FTA+KD +P++W ++ GERIGT+ GH+G +WDL V S R++ L+ + H GPVR AFA+G+Q FA++SDPF D IS+++ P++ + LEI++P ++ T +VW +NE L V++ +G +R +DP+ EL+ E H+K INR+ NKD+TL +T S D+T+KL + LE LKTYKTDRPVN A++ K+H++LGGGQ+AMSVTTT+ VGKFE RFFH++YEEEFG VKGHFGPIN L +NPNG ++ASGAEDGYVRLHFFD+ YL+ +D +P+E E+G + AD
Sbjct: 38 RPILLKGHERSITLVKYNHDGDLLFTASKDHVPSMWRSENGERIGTFNGHKGTIWDLDVCRFSKRVVXXXXXXXXXXXXXXXXXXLMDFKHHGPVRGVAFAQGSQMFASISDPFVDHNAQISIYDIPEDEDPSTYDDTPRLEIDLPKMPDGKRVNPTNIVWLNLNEALFVTFDNGAVRLYDPVTGDELE-------EIFPHEKKINRVSFNKDKTLFITSSADFTSKLYDVVDLEHLKTYKTDRPVNDAVISEKKDHILLGGGQEAMSVTTTAGKVGKFETRFFHLVYEEEFGSVKGHFGPINALDINPNGRNYASGAEDGYVRLHFFDKSYLDMKDPVPEEPEDGEEKVAD 382
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7S3L4V7_9STRA (Eukaryotic translation initiation factor 3 subunit I n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L4V7_9STRA) HSP 1 Score: 362 bits (928), Expect = 8.900e-116 Identity = 180/349 (51.58%), Postives = 246/349 (70.49%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDA 1038
RP LL+GHER IT + +N DGDL+FTA+KD +P++W+ G+R+GTY GH+G VWDLS S RL++ASAD + R+W+VQTG + + H GPVR +AEG+Q+F T++D F D P ISV++ P+ + SL I++P ++ T V W AMNE ++V++ +G ++ +DP + E+ K E H+K INR+ N D+TLL+T S D+T+KL + + LKTYKTDRPVN A++ KEH++LGGGQ+AMSVTTTS VGKFE RFF+M+Y+EEF VKGHFGPIN LA+NP+G S+ASGAEDGYVRLH FD+DYL+ D +P+E EEG +
Sbjct: 2 RPYLLQGHERPITSIEFNYDGDLLFTASKDHVPSVWWVDGGKRLGTYTGHKGTVWDLSCDRFSRRLLTASADTTCRLWNVQTGECIRHFTHTGPVRGVEWAEGSQKFVTINDSFMDHPPKISVYDVPEGQDPESYSDEPSLVIDLPKHATKRVAPTNVKWTAMNEDILVAFDNGMIKLYDP-ETGEM------KEEFSAHEKKINRVQFNIDKTLLITSSADFTSKLYDPVDWKHLKTYKTDRPVNDAVISDHKEHILLGGGQEAMSVTTTSGKVGKFETRFFYMVYQEEFATVKGHFGPINALAINPDGRSYASGAEDGYVRLHMFDKDYLDMVDPVPEE-EEGENEG 342
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Match: A0A7S2I7B8_9STRA (Eukaryotic translation initiation factor 3 subunit I n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2I7B8_9STRA) HSP 1 Score: 357 bits (917), Expect = 6.030e-114 Identity = 173/351 (49.29%), Postives = 242/351 (68.95%), Query Frame = 1
Query: 4 RPILLKGHERAITCVVYNNDGDLVFTAAKDQIPTLWYAKTGERIGTYQGHQGAVWDLSVAWDSTRLISASADASARMWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETPDNVPTDQLEKIASLEIEVPP-----KMKATKVVWGAMNEKLIVSYTDGTLRTFDPLDATELQYAQVAKGEDGIHQKDINRLYPNKDRTLLLTCSKDYTAKLLNADTLEVLKTYKTDRPVNAAIMHPSKEHVILGGGQDAMSVTTTSSSVGKFEARFFHMIYEEEFGRVKGHFGPINVLAVNPNGLSFASGAEDGYVRLHFFDEDYLNKQDEIPDELEEGHKDAA 1041
RPILLKGHER+IT V YN DGDL+FTA+KD +P++W A++G+R+GT+ GH+G +WDL V STR+++ + V++H GPVR A+A+G+ FAT+SDPF D IS+++ P + + LEI++P ++ T +VW +NE L V++ +G++R +D + EL+ E H+K INR+ N+++TL +T S D+TAKL + L LKTYKT+RPVN A++HP+K+H++LGGGQ+AMSVTTT VGKFE RFFH++YEEEFG+VKGHFGPIN L VNPNG S+ASGAEDGYVRLHFFD+ YL+ +D +P+ E G ++
Sbjct: 2 RPILLKGHERSITVVKYNYDGDLLFTASKDHVPSVWRAESGDRLGTFAGHKGTIWDLDVDRFSTRVLTXXXXXXXXXXXXXXXECIKVFSHRGPVRGVAWADGSNSFATISDPFVDHNAQISIYDVPQDESPSDYDDTPRLEIDLPKTNDGKRVNPTNIVWLNLNEALFVTFDNGSIRLYDTVTGDELE-------EIFPHEKKINRVSFNQEKTLFITSSADFTAKLYDVVNLHHLKTYKTERPVNDAVIHPTKDHILLGGGQEAMSVTTTRGDVGKFETRFFHLVYEEEFGKVKGHFGPINALGVNPNGRSYASGAEDGYVRLHFFDKSYLDMKDPVPEAPEGGEEEEG 345 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig892.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig892.19.1 >prot_A-nodosum_M_contig892.19.1 ID=prot_A-nodosum_M_contig892.19.1|Name=mRNA_A-nodosum_M_contig892.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=276bp MWDVQTGRELVVYNHMGPVRSCAFAEGAQRFATVSDPFTDSPGLISVFETback to top mRNA from alignment at A-nodosum_M_contig892:224857..233124- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig892.19.1 ID=mRNA_A-nodosum_M_contig892.19.1|Name=mRNA_A-nodosum_M_contig892.19.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8268bp|location=Sequence derived from alignment at A-nodosum_M_contig892:224857..233124- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig892:224857..233124- >mRNA_A-nodosum_M_contig892.19.1 ID=mRNA_A-nodosum_M_contig892.19.1|Name=mRNA_A-nodosum_M_contig892.19.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=828bp|location=Sequence derived from alignment at A-nodosum_M_contig892:224857..233124- (Ascophyllum nodosum dioecious)back to top |