prot_A-nodosum_M_contig89.38.8 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.38.8
Unique Nameprot_A-nodosum_M_contig89.38.8
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length745
Homology
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: D8LB48_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB48_ECTSI)

HSP 1 Score: 535 bits (1379), Expect = 1.890e-179
Identity = 284/476 (59.66%), Postives = 325/476 (68.28%), Query Frame = 0
Query:  115 RSEKGRSKRQRXGDAKRARKERALAQA-EKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKE-IAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEENPSL-GGWKGTKRARAAATA 587
            R + GR KR R GDAKR RK++ALA A EKCEYY DD GLRRVRPYIYDF THAKERWLGR V+DVFSAEFGG  RS+YE A+R GLLTVNG    +DY  +N+D++CN+      THRHEPPV GGDIPIVSESA+E+VVDKPCTVPIHPCGSYRFNTLFYI+ RQRP+L+LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG+GRTRKTYLARVSG+FGQ LP +RR+ GSPS                                                                      ELWWRYE+ GE VV+G  +  G        ++G      + + ++  + S   G  KE + +RVNCPIRVLD K GVYECH  GKEAQTV+RKV YD +SDTSV+ECTPVHGRTHQIRLHLQW GHPIANDPCYGG+LHFG+PEA+RR EENP L GGWKG   + + A A
Sbjct:   51 RGDDGRGKRPRKGDAKRERKKKALAHAAEKCEYYVDDHGLRRVRPYIYDFQTHAKERWLGRTVVDVFSAEFGGEARSHYENAVRGGLLTVNGNKVGVDYELQNSDLICNK------THRHEPPVCGGDIPIVSESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSG-------AISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLEGGWKGVPGSNSTAAA 508          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A6H5KK40_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK40_9PHAE)

HSP 1 Score: 394 bits (1013), Expect = 3.580e-127
Identity = 223/395 (56.46%), Postives = 253/395 (64.05%), Query Frame = 0
Query:  115 RSEKGRSKRQRXGDAKRARKERALAQA-EKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDA-NTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTV 507
            R + GR KR R GDAKR RK++ALA A EKCEYY D  GLRRVRPYIY+F THAKERWLGR V+DVFSAEFGG PRS+YE AIR GLLTVNG    +DY  +N+D++CNR      THRHEPPV GGDIPIV ESA+E+VVDKPCTVPIHPCGSYRFNTLFYI+ RQRP+L+LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG GRTRKTYLARVSG+FGQ LP +RR+ GSPS                                                                      ELWWRYE+ GE VV+G  +  G        V+G      + + ++  A      GE + + +RVNCPIRVLD K GVYECH  GKEAQTV
Sbjct:   31 RGDDGRGKRPRKGDAKRERKKKALAHASEKCEYYVDGHGLRRVRPYIYNFQTHAKERWLGRTVVDVFSAEFGGEPRSHYENAIRGGLLTVNGNKVGVDYELQNSDLICNR------THRHEPPVCGGDIPIVFESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGLGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXADELWWRYESLGEGVVKGRLRSSG-------AVSGEEGGLAESSVSSGRAGGGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTV 406          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A2P4WXF4_9STRA (RNA pseudouridylate synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXF4_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.300e-71
Identity = 167/469 (35.61%), Postives = 227/469 (48.40%), Query Frame = 0
Query:  102 KARRFDTGSVDKQRSEKGRSKRQRXGDAKRARKERALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEEN 569
            K RR +   V++Q ++K +SKR    DAK A   R  A+A K  + +   G R V PY+Y+F T AK RW  R+++++F+ EFG N   YYE AI  G ++VN K    D + KN D++       +  HRHEPPV+G ++P+V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  KTYLARV G F                                                                             PE LD               V   L K+  D+                    A  I   ++G     AI +NCP+R L A+DGV+ECH EGK ++T+++ V  D    TS+++C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   R +  E+
Sbjct:   30 KLRRAERDPVERQ-AKKRKSKR----DAKNAN--RFQAEAPKYSFAN---GYRMVEPYVYEFRTFAKARWFDRELLEIFTKEFGANSPEYYEFAIASGRISVNHKIVPADTIIKNGDLII------HTAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNATKAKALSSIIADRQASKTYLARVRGQF-----------------------------------------------------------------------------PEVLDSD-------------VQAKLVKQAKDNC------------------PASVITFPEEG-----AILINCPLRCLSARDGVWECHEEGKSSETLVQLVRTDKC--TSLMKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGELHFGESAERAKEIED 367          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A5D6Y583_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y583_9STRA)

HSP 1 Score: 248 bits (632), Expect = 7.700e-71
Identity = 149/413 (36.08%), Postives = 201/413 (48.67%), Query Frame = 0
Query:  152 GLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELS-LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEAR 563
            G R V+PY+Y+F THAKERW GR+++ +F+AEFG N   YY  AI+ G +TVN +    D V  N D++       ++THRHEPPV+G +IPIV E  D +VV KP ++  HP G+YR+N+L  ILQ  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  KTYLAR  G F   L P  +                                                               +LA   +A               +C    +                    T+ DA+  +                ++CP+R + A++GVYECHAEGK ++TV+  V     S T V +C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG+ +AR
Sbjct:   62 GYRLVKPYVYEFRTHAKERWYGRELLAIFTAEFGANSPDYYRFAIQSGRITVNERIVGPDTVINNGDLIV------HKTHRHEPPVSGEEIPIVHEDDDLLVVCKPPSITTHPSGAYRYNSLHLILQHMRPDLPPLHIVHRLDRLTSGIVLLAKNAAKAKELSLCIAERQASKTYLARARGCFPTALTPNAKL--------------------------------------------------------------QLAQTAQA---------------KCPASSV--------------------TFTDADELV----------------ISCPLRCVSAREGVYECHAEGKPSETVVSLVRN--GSATCVFKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGQLHFGESQAR 353          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A8K1CHM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHM9_PYTOL)

HSP 1 Score: 248 bits (633), Expect = 1.480e-70
Identity = 158/440 (35.91%), Postives = 211/440 (47.95%), Query Frame = 0
Query:  132 ARKER------ALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARR 564
            ARKER      A ++AE  EY+ +D G R V+PY+Y++ T+AKERWLGR +I +F+ EFG N   YY+ AI+ G +TVN K    + + KN D++       ++ HRHEPPV G ++PI  E  D +VV KP ++P HPCG+YR N+L  I+ R RP+L  L + HRLDRLTSG+ I AK+  +A  + + I      KTYLARV G+                                                                                                      L  E  DD    + V  A  N       A  I   DD       I ++CP+R L  +D V+ECH EGKE+QT +R +  D    T+++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   RR
Sbjct:   68 ARKERKRSAKAAHSEAEP-EYFFED-GYRFVKPYLYEYRTYAKERWLGRPLISMFTEEFGANSPEYYQAAIQSGRITVNDKIVTPETIIKNRDLIL------HKAHRHEPPVIGEEVPIAYEDDDLLVVVKPSSMPTHPCGAYRHNSLHTIVHRMRPDLPQLNIVHRLDRLTSGIVILAKSGVKAKALSQCISDREASKTYLARVRGH------------------------------------------------------------------------------------------------------LPTEAFDDAFKQQLVATAAKNC-----AASEITFPDDQ-----TIHISCPLRCLSQRDAVWECHEEGKESQTRVRVLRID--QQTTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESSERR 385          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A329RSN8_9STRA (PseudoU_synth_2 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329RSN8_9STRA)

HSP 1 Score: 244 bits (623), Expect = 2.170e-69
Identity = 159/448 (35.49%), Postives = 217/448 (48.44%), Query Frame = 0
Query:  122 KRQRXGDAKRARKERALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEE 568
            KR+   DAK A+  R  A+A K  + +   G R V PY+Y+F T+AK RW  R+++++F+ EFG N   YY+ AI  G ++VN K    D + KN D++       +  HRHEPPV+G ++P+V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK + +A  +   I   +  KTYLARV G F   L                                                                   SE+                                      ++ VN A  N       A  I   D+G     AI ++CP+R L A+DGV+ECH EGK ++T++R V  D    TS+++C PV GRTHQIRLHL+ +G PIANDPCYGG+LHFG  E+  R EE
Sbjct:   50 KRKSKQDAKSAK--RFQAEAPKYSFAN---GYRMVEPYVYEFRTYAKARWFDRELLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTIIKNGDLII------HAAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVMLLAKNSAKAKALSSIIADRQASKTYLARVRGQFPDLL------------------------------------------------------------------NSEIQ-------------------------------------DKLVNQAKENC-----PASIITFPDEG-----AILISCPLRCLSARDGVWECHEEGKPSETLVRLVRTDKC--TSLMKCKPVTGRTHQIRLHLRLIGFPIANDPCYGGELHFG--ESAERAEE 369          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: G4YVW7_PHYSP (PseudoU_synth_2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YVW7_PHYSP)

HSP 1 Score: 238 bits (608), Expect = 1.510e-67
Identity = 156/465 (33.55%), Postives = 220/465 (47.31%), Query Frame = 0
Query:  102 KARRFDTGSVDKQRSEKGRSKRQRXGDAKRARKERALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRR 565
            K RR +   V++Q ++K +SKR    DAK A+      QAE  +Y   + G R V PY+Y+F T AK RW  R+++++F+ EFG N   YY+ AI  G ++VN K    D V KN D++       +  HRHEPPV+G ++ +V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  K YLARV G F   L P                                                                     A+ E L                                             ++  +   + +    KE  + ++CP+R L A+DGV+ECH EGK ++T+++ +  D    TS++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   R +
Sbjct:    8 KLRRAERDPVERQ-AKKRKSKR----DAKNAKH----FQAEAPKYSFAN-GYRMVEPYVYEFRTFAKARWFDRQLLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTVIKNGDLII------HTAHRHEPPVSGEEVSVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHSIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNAAKAKALSAIIANRQASKMYLARVRGQFPDLLDP---------------------------------------------------------------------AVQEKLV--------------------------------------------SSAKVTCPASEISFPKEGGVLISCPLRCLSARDGVWECHEEGKSSETLVKLIRTDKC--TSLMECKPITGRTHQIRLHLQLIGFPIANDPCYGGELHFGESTERAK 341          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A2D4BPM1_PYTIN (RNA pseudouridylate synthase, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPM1_PYTIN)

HSP 1 Score: 240 bits (612), Expect = 3.030e-67
Identity = 156/444 (35.14%), Postives = 214/444 (48.20%), Query Frame = 0
Query:  122 KRQRXGDAKRARKERALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARR 564
            KR    + KR+ K  A A A + +YY   +G R V PY+Y+F T AKERW GR ++ +F+ EFG N   YY  AI  G +T+N +    D V KN D+V       ++ HRHEPPV+G ++          VV KP ++P HPCG+YR N+L  I+ R RP+L +L + HRLDRLTSG+ I AK+  +A  + + I      KTYLARV G+    L    +Q                                               R++E A   A+ + SE++ +                         Q +DG DV                                   I V+CP+R L  +D V+ECHA+GKE+QT +R    D +  T+++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   RR
Sbjct:   86 KRMARKERKRSVKAAANAAAAEPDYYFS-RGYRFVTPYVYEFRTFAKERWFGRTLLAMFTEEFGANSPEYYRAAIASGRITINNRIVSPDTVIKNRDLVV------HKAHRHEPPVSGEEVXXXXXXXXXXVVAKPPSMPTHPCGAYRHNSLHTIVSRMRPDLPTLNIVHRLDRLTSGIVILAKSGAKAKALAQCISDREASKTYLARVRGHLPLQLDDAFKQ-----------------------------------------------RLVETA--RANCAASEVSFLQ------------------------QDDDGADV-----------------------------------IHVSCPLRCLSPRDAVWECHADGKESQTRVRVRRLDGA--TTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESADRR 412          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A7S2UKE3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKE3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.560e-66
Identity = 164/462 (35.50%), Postives = 230/462 (49.78%), Query Frame = 0
Query:  153 LRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGD--------------------IPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRV--CHRLDRLTSGLTIFAKTAERAGVIQKQI-GAGRTRKTYLARVSGNFGQYLPPE-RRQAGSPSTFAETCSAPP-----TRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIA------IRVNCPIRVLDAKDGVYECHAEG-----------KEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEE 568
            +R V+PY Y F T AKERW+GR V+DV+  EFG  P+SYY+ AI  G + V+GK    D++ K          + +  HRHEP VA  D                    I IV ES   IVVDKP T+PIHPCG Y +N+L +IL  +RP+L  +V   HRLDRLTSGLTIFAK+ E A  + K I      +K YLARV G F  ++PPE R ++ SP    +  + PP      R ++  +  + D++   S   +    N      + +A GT      E A +    +    +        E ++  L+KE           + ++P     ++T     ++   E KE A        + CP R+   K G+ E  +             K AQT    V YD  +D++V+ C PV GRTHQIRLHL+++GHPIANDP Y G++ FGD +  R  +E
Sbjct:    1 IRIVKPYPYTFATFAKERWIGRTVLDVYHDEFGSYPKSYYKAAINEGRILVSGKHVTCDFLIKGG------HELTHTVHRHEPAVAVCDLLLDNEDDTTIVMEDREKQLIRIVHESDSVIVVDKPSTLPIHPCGGYNYNSLIHILTSERPDLKEKVFTVHRLDRLTSGLTIFAKSTEVAKSMGKCIMDRDHCQKVYLARVKGKFPLHVPPELRTKSCSPD---QPNNVPPFVHGEKRMNSATSTMNNDSKQHASSEGENSRSNFGLGFWVTDASGTV----HENATLTSVFESGSSI--------ETLLSDLEKET---TNNQPDTSSSLPGDDGISSTPTCKETDSPNEEKEEASSGVYWFHLACPTRIAVKKTGICEAGSFSNLDPSLYRKTVKPAQTSFAVVGYDAKTDSTVVLCKPVTGRTHQIRLHLEYMGHPIANDPNYSGEIWFGDEKGERLYKE 438          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A024FZK7_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZK7_9STRA)

HSP 1 Score: 234 bits (598), Expect = 6.010e-66
Identity = 149/426 (34.98%), Postives = 196/426 (46.01%), Query Frame = 0
Query:  152 GLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDT----SVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFG-DPEARRRMEENPS 571
            G R V+PY+Y++   AKERW  R++ DV + EFG     YY+ A+R G +TVN       Y  +N D +       +RTHRHEPPV+  +IP+V E  + +VV KPC++P HPCG+YR N+L  IL    PEL SL V HRLDRLTSG+ IFAK    A  +  ++   + RKTYLA V G+                                                                             IP          W  ET         +++D    R  +                  I    +    E  IRV CP+R L  K+GV+ECH +GKE++T+       V ++     SVL C PV GRTHQIRLHLQ +G PIANDPCYGGKLHFG +PE  + ++E  S
Sbjct:   54 GYRLVKPYVYEYQAFAKERWYKRELFDVLTTEFGAYTSQYYDVAVRSGRVTVNHSIVSPTYQIQNGDFIV------HRTHRHEPPVSSDEIPVVHEDDELLVVSKPCSIPTHPCGAYRHNSLHSILLHLFPELKSLHVVHRLDRLTSGIVIFAKNGATAKKLSTEMTKRQVRKTYLAGVKGS-----------------------------------------------------------------------------IP--------FKWDEET--------RKRQDKIKERARD------------------ICDASEISFSEKQIRVKCPLRCLSHKNGVWECHKDGKESETIFELDQLTVPTENRGALSVLRCYPVTGRTHQIRLHLQLIGLPIANDPCYGGKLHFGVNPELSKTIDETKS 362          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB48_ECTSI1.890e-17959.66Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KK40_9PHAE3.580e-12756.46PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A2P4WXF4_9STRA1.300e-7135.61RNA pseudouridylate synthase n=1 Tax=Phytophthora ... [more]
A0A5D6Y583_9STRA7.700e-7136.08PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A8K1CHM9_PYTOL1.480e-7035.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329RSN8_9STRA2.170e-6935.49PseudoU_synth_2 domain-containing protein n=9 Tax=... [more]
G4YVW7_PHYSP1.510e-6733.55PseudoU_synth_2 domain-containing protein n=4 Tax=... [more]
A0A2D4BPM1_PYTIN3.030e-6735.14RNA pseudouridylate synthase, putative n=2 Tax=Pyt... [more]
A0A7S2UKE3_9STRA1.560e-6635.50Hypothetical protein (Fragment) n=2 Tax=Attheya se... [more]
A0A024FZK7_9STRA6.010e-6634.98PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 461..570
e-value: 1.5E-18
score: 69.2
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 236..401
e-value: 4.3E-21
score: 77.5
NoneNo IPR availablePIRSRPIRSR606225-1PIRSR606225-1coord: 231..334
e-value: 2.3E-22
score: 77.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 375..405
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 130..723
NoneNo IPR availablePANTHERPTHR21600:SF40RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 2coord: 130..723
NoneNo IPR availablePROSITEPS50889S4coord: 175..249
score: 9.34981
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 252..540
e-value: 2.9E-23
score: 82.7
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 234..334
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 479..558

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:299153..307047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.38.8mRNA_A-nodosum_M_contig89.38.8Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 299113..307280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.38.8 ID=prot_A-nodosum_M_contig89.38.8|Name=mRNA_A-nodosum_M_contig89.38.8|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=745bp
MLPYLMLVPPLAQPNTPLIPLVAVEVSTYREKTVVLNRGAKHPDRRTALT
RFIGMEESCDSTEPSLPGNVEKDSATAAATATVYDDPRRVESRKPESSPP
HKARRFDTGSVDKQRSEKGRSKRQRKGDAKRARKERALAQAEKCEYYHDD
QGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGL
LTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESAD
EIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLT
IFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTF
AETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTA
SPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVN
GAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAE
GKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPC
YGGKLHFGDPEARRRMEENPSLGGWKGTKRARAAATAAETVTTATTTAIP
GKGEGCSSQEDSIMANMENAHGRTAAAVGGVLRSHEDNSTSEAKLGNAHG
GVTVHQEKPGSEEGSTLGGDVTANRDEQDEEAFVIRTCSVCQGGERFTEN
QLHCVGIWLHALRYEASTFSWASKRDGAATVQVLVDSFQELIQN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf