mRNA_A-nodosum_M_contig89.38.8 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig89.38.8
Unique NamemRNA_A-nodosum_M_contig89.38.8
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: D8LB48_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB48_ECTSI)

HSP 1 Score: 535 bits (1379), Expect = 3.270e-178
Identity = 284/476 (59.66%), Postives = 325/476 (68.28%), Query Frame = 3
Query:  576 RSEKGRSKRQRXGDAKRARKERALAQA-EKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKE-IAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEENPSL-GGWKGTKRARAAATA 1994
            R + GR KR R GDAKR RK++ALA A EKCEYY DD GLRRVRPYIYDF THAKERWLGR V+DVFSAEFGG  RS+YE A+R GLLTVNG    +DY  +N+D++CN+      THRHEPPV GGDIPIVSESA+E+VVDKPCTVPIHPCGSYRFNTLFYI+ RQRP+L+LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG+GRTRKTYLARVSG+FGQ LP +RR+ GSPS                                                                      ELWWRYE+ GE VV+G  +  G        ++G      + + ++  + S   G  KE + +RVNCPIRVLD K GVYECH  GKEAQTV+RKV YD +SDTSV+ECTPVHGRTHQIRLHLQW GHPIANDPCYGG+LHFG+PEA+RR EENP L GGWKG   + + A A
Sbjct:   51 RGDDGRGKRPRKGDAKRERKKKALAHAAEKCEYYVDDHGLRRVRPYIYDFQTHAKERWLGRTVVDVFSAEFGGEARSHYENAVRGGLLTVNGNKVGVDYELQNSDLICNK------THRHEPPVCGGDIPIVSESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGRLRSSG-------AISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLEGGWKGVPGSNSTAAA 508          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A6H5KK40_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK40_9PHAE)

HSP 1 Score: 394 bits (1013), Expect = 4.100e-126
Identity = 223/395 (56.46%), Postives = 253/395 (64.05%), Query Frame = 3
Query:  576 RSEKGRSKRQRXGDAKRARKERALAQA-EKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDA-NTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTV 1754
            R + GR KR R GDAKR RK++ALA A EKCEYY D  GLRRVRPYIY+F THAKERWLGR V+DVFSAEFGG PRS+YE AIR GLLTVNG    +DY  +N+D++CNR      THRHEPPV GGDIPIV ESA+E+VVDKPCTVPIHPCGSYRFNTLFYI+ RQRP+L+LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG GRTRKTYLARVSG+FGQ LP +RR+ GSPS                                                                      ELWWRYE+ GE VV+G  +  G        V+G      + + ++  A      GE + + +RVNCPIRVLD K GVYECH  GKEAQTV
Sbjct:   31 RGDDGRGKRPRKGDAKRERKKKALAHASEKCEYYVDGHGLRRVRPYIYNFQTHAKERWLGRTVVDVFSAEFGGEPRSHYENAIRGGLLTVNGNKVGVDYELQNSDLICNR------THRHEPPVCGGDIPIVFESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGLGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXADELWWRYESLGEGVVKGRLRSSG-------AVSGEEGGLAESSVSSGRAGGGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTV 406          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A2P4WXF4_9STRA (RNA pseudouridylate synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXF4_9STRA)

HSP 1 Score: 250 bits (638), Expect = 6.120e-71
Identity = 167/469 (35.61%), Postives = 227/469 (48.40%), Query Frame = 3
Query:  537 KARRFDTGSVDKQRSEKGRSKRQRXGDAKRARKERALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEEN 1940
            K RR +   V++Q ++K +SKR    DAK A   R  A+A K  + +   G R V PY+Y+F T AK RW  R+++++F+ EFG N   YYE AI  G ++VN K    D + KN D++       +  HRHEPPV+G ++P+V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  KTYLARV G F                                                                             PE LD               V   L K+  D+                    A  I   ++G     AI +NCP+R L A+DGV+ECH EGK ++T+++ V  D    TS+++C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   R +  E+
Sbjct:   30 KLRRAERDPVERQ-AKKRKSKR----DAKNAN--RFQAEAPKYSFAN---GYRMVEPYVYEFRTFAKARWFDRELLEIFTKEFGANSPEYYEFAIASGRISVNHKIVPADTIIKNGDLII------HTAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNATKAKALSSIIADRQASKTYLARVRGQF-----------------------------------------------------------------------------PEVLDSD-------------VQAKLVKQAKDNC------------------PASVITFPEEG-----AILINCPLRCLSARDGVWECHEEGKSSETLVQLVRTDKC--TSLMKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGELHFGESAERAKEIED 367          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A5D6Y583_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y583_9STRA)

HSP 1 Score: 248 bits (632), Expect = 3.540e-70
Identity = 149/413 (36.08%), Postives = 201/413 (48.67%), Query Frame = 3
Query:  687 GLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELS-LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEAR 1922
            G R V+PY+Y+F THAKERW GR+++ +F+AEFG N   YY  AI+ G +TVN +    D V  N D++       ++THRHEPPV+G +IPIV E  D +VV KP ++  HP G+YR+N+L  ILQ  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  KTYLAR  G F   L P  +                                                               +LA   +A               +C    +                    T+ DA+  +                ++CP+R + A++GVYECHAEGK ++TV+  V     S T V +C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG+ +AR
Sbjct:   62 GYRLVKPYVYEFRTHAKERWYGRELLAIFTAEFGANSPDYYRFAIQSGRITVNERIVGPDTVINNGDLIV------HKTHRHEPPVSGEEIPIVHEDDDLLVVCKPPSITTHPSGAYRYNSLHLILQHMRPDLPPLHIVHRLDRLTSGIVLLAKNAAKAKELSLCIAERQASKTYLARARGCFPTALTPNAKL--------------------------------------------------------------QLAQTAQA---------------KCPASSV--------------------TFTDADELV----------------ISCPLRCVSAREGVYECHAEGKPSETVVSLVRN--GSATCVFKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGQLHFGESQAR 353          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A8K1CHM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHM9_PYTOL)

HSP 1 Score: 248 bits (633), Expect = 6.830e-70
Identity = 158/440 (35.91%), Postives = 211/440 (47.95%), Query Frame = 3
Query:  627 ARKER------ALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARR 1925
            ARKER      A ++AE  EY+ +D G R V+PY+Y++ T+AKERWLGR +I +F+ EFG N   YY+ AI+ G +TVN K    + + KN D++       ++ HRHEPPV G ++PI  E  D +VV KP ++P HPCG+YR N+L  I+ R RP+L  L + HRLDRLTSG+ I AK+  +A  + + I      KTYLARV G+                                                                                                      L  E  DD    + V  A  N       A  I   DD       I ++CP+R L  +D V+ECH EGKE+QT +R +  D    T+++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   RR
Sbjct:   68 ARKERKRSAKAAHSEAEP-EYFFED-GYRFVKPYLYEYRTYAKERWLGRPLISMFTEEFGANSPEYYQAAIQSGRITVNDKIVTPETIIKNRDLIL------HKAHRHEPPVIGEEVPIAYEDDDLLVVVKPSSMPTHPCGAYRHNSLHTIVHRMRPDLPQLNIVHRLDRLTSGIVILAKSGVKAKALSQCISDREASKTYLARVRGH------------------------------------------------------------------------------------------------------LPTEAFDDAFKQQLVATAAKNC-----AASEITFPDDQ-----TIHISCPLRCLSQRDAVWECHEEGKESQTRVRVLRID--QQTTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESSERR 385          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A329RSN8_9STRA (PseudoU_synth_2 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329RSN8_9STRA)

HSP 1 Score: 244 bits (623), Expect = 9.630e-69
Identity = 159/448 (35.49%), Postives = 217/448 (48.44%), Query Frame = 3
Query:  597 KRQRXGDAKRARKERALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEE 1937
            KR+   DAK A+  R  A+A K  + +   G R V PY+Y+F T+AK RW  R+++++F+ EFG N   YY+ AI  G ++VN K    D + KN D++       +  HRHEPPV+G ++P+V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK + +A  +   I   +  KTYLARV G F   L                                                                   SE+                                      ++ VN A  N       A  I   D+G     AI ++CP+R L A+DGV+ECH EGK ++T++R V  D    TS+++C PV GRTHQIRLHL+ +G PIANDPCYGG+LHFG  E+  R EE
Sbjct:   50 KRKSKQDAKSAK--RFQAEAPKYSFAN---GYRMVEPYVYEFRTYAKARWFDRELLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTIIKNGDLII------HAAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVMLLAKNSAKAKALSSIIADRQASKTYLARVRGQFPDLL------------------------------------------------------------------NSEIQ-------------------------------------DKLVNQAKENC-----PASIITFPDEG-----AILISCPLRCLSARDGVWECHEEGKPSETLVRLVRTDKC--TSLMKCKPVTGRTHQIRLHLRLIGFPIANDPCYGGELHFG--ESAERAEE 369          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: G4YVW7_PHYSP (PseudoU_synth_2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YVW7_PHYSP)

HSP 1 Score: 238 bits (608), Expect = 6.350e-67
Identity = 156/465 (33.55%), Postives = 220/465 (47.31%), Query Frame = 3
Query:  537 KARRFDTGSVDKQRSEKGRSKRQRXGDAKRARKERALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRR 1928
            K RR +   V++Q ++K +SKR    DAK A+      QAE  +Y   + G R V PY+Y+F T AK RW  R+++++F+ EFG N   YY+ AI  G ++VN K    D V KN D++       +  HRHEPPV+G ++ +V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  K YLARV G F   L P                                                                     A+ E L                                             ++  +   + +    KE  + ++CP+R L A+DGV+ECH EGK ++T+++ +  D    TS++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   R +
Sbjct:    8 KLRRAERDPVERQ-AKKRKSKR----DAKNAKH----FQAEAPKYSFAN-GYRMVEPYVYEFRTFAKARWFDRQLLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTVIKNGDLII------HTAHRHEPPVSGEEVSVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHSIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNAAKAKALSAIIANRQASKMYLARVRGQFPDLLDP---------------------------------------------------------------------AVQEKLV--------------------------------------------SSAKVTCPASEISFPKEGGVLISCPLRCLSARDGVWECHEEGKSSETLVKLIRTDKC--TSLMECKPITGRTHQIRLHLQLIGFPIANDPCYGGELHFGESTERAK 341          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A2D4BPM1_PYTIN (RNA pseudouridylate synthase, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPM1_PYTIN)

HSP 1 Score: 240 bits (612), Expect = 1.290e-66
Identity = 156/444 (35.14%), Postives = 214/444 (48.20%), Query Frame = 3
Query:  597 KRQRXGDAKRARKERALAQAEKCEYYHDDQGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARR 1925
            KR    + KR+ K  A A A + +YY   +G R V PY+Y+F T AKERW GR ++ +F+ EFG N   YY  AI  G +T+N +    D V KN D+V       ++ HRHEPPV+G ++          VV KP ++P HPCG+YR N+L  I+ R RP+L +L + HRLDRLTSG+ I AK+  +A  + + I      KTYLARV G+    L    +Q                                               R++E A   A+ + SE++ +                         Q +DG DV                                   I V+CP+R L  +D V+ECHA+GKE+QT +R    D +  T+++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   RR
Sbjct:   86 KRMARKERKRSVKAAANAAAAEPDYYFS-RGYRFVTPYVYEFRTFAKERWFGRTLLAMFTEEFGANSPEYYRAAIASGRITINNRIVSPDTVIKNRDLVV------HKAHRHEPPVSGEEVXXXXXXXXXXVVAKPPSMPTHPCGAYRHNSLHTIVSRMRPDLPTLNIVHRLDRLTSGIVILAKSGAKAKALAQCISDREASKTYLARVRGHLPLQLDDAFKQ-----------------------------------------------RLVETA--RANCAASEVSFLQ------------------------QDDDGADV-----------------------------------IHVSCPLRCLSPRDAVWECHADGKESQTRVRVRRLDGA--TTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESADRR 412          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A7S2UKE3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKE3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 6.400e-66
Identity = 164/462 (35.50%), Postives = 230/462 (49.78%), Query Frame = 3
Query:  690 LRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGD--------------------IPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRV--CHRLDRLTSGLTIFAKTAERAGVIQKQI-GAGRTRKTYLARVSGNFGQYLPPE-RRQAGSPSTFAETCSAPP-----TRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIA------IRVNCPIRVLDAKDGVYECHAEG-----------KEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEE 1937
            +R V+PY Y F T AKERW+GR V+DV+  EFG  P+SYY+ AI  G + V+GK    D++ K          + +  HRHEP VA  D                    I IV ES   IVVDKP T+PIHPCG Y +N+L +IL  +RP+L  +V   HRLDRLTSGLTIFAK+ E A  + K I      +K YLARV G F  ++PPE R ++ SP    +  + PP      R ++  +  + D++   S   +    N      + +A GT      E A +    +    +        E ++  L+KE           + ++P     ++T     ++   E KE A        + CP R+   K G+ E  +             K AQT    V YD  +D++V+ C PV GRTHQIRLHL+++GHPIANDP Y G++ FGD +  R  +E
Sbjct:    1 IRIVKPYPYTFATFAKERWIGRTVLDVYHDEFGSYPKSYYKAAINEGRILVSGKHVTCDFLIKGG------HELTHTVHRHEPAVAVCDLLLDNEDDTTIVMEDREKQLIRIVHESDSVIVVDKPSTLPIHPCGGYNYNSLIHILTSERPDLKEKVFTVHRLDRLTSGLTIFAKSTEVAKSMGKCIMDRDHCQKVYLARVKGKFPLHVPPELRTKSCSPD---QPNNVPPFVHGEKRMNSATSTMNNDSKQHASSEGENSRSNFGLGFWVTDASGTV----HENATLTSVFESGSSI--------ETLLSDLEKET---TNNQPDTSSSLPGDDGISSTPTCKETDSPNEEKEEASSGVYWFHLACPTRIAVKKTGICEAGSFSNLDPSLYRKTVKPAQTSFAVVGYDAKTDSTVVLCKPVTGRTHQIRLHLEYMGHPIANDPNYSGEIWFGDEKGERLYKE 438          
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Match: A0A024FZK7_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZK7_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.420e-65
Identity = 149/426 (34.98%), Postives = 196/426 (46.01%), Query Frame = 3
Query:  687 GLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTFAETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTASPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVNGAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDVSSDT----SVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFG-DPEARRRMEENPS 1946
            G R V+PY+Y++   AKERW  R++ DV + EFG     YY+ A+R G +TVN       Y  +N D +       +RTHRHEPPV+  +IP+V E  + +VV KPC++P HPCG+YR N+L  IL    PEL SL V HRLDRLTSG+ IFAK    A  +  ++   + RKTYLA V G+                                                                             IP          W  ET         +++D    R  +                  I    +    E  IRV CP+R L  K+GV+ECH +GKE++T+       V ++     SVL C PV GRTHQIRLHLQ +G PIANDPCYGGKLHFG +PE  + ++E  S
Sbjct:   54 GYRLVKPYVYEYQAFAKERWYKRELFDVLTTEFGAYTSQYYDVAVRSGRVTVNHSIVSPTYQIQNGDFIV------HRTHRHEPPVSSDEIPVVHEDDELLVVSKPCSIPTHPCGAYRHNSLHSILLHLFPELKSLHVVHRLDRLTSGIVIFAKNGATAKKLSTEMTKRQVRKTYLAGVKGS-----------------------------------------------------------------------------IP--------FKWDEET--------RKRQDKIKERARD------------------ICDASEISFSEKQIRVKCPLRCLSHKNGVWECHKDGKESETIFELDQLTVPTENRGALSVLRCYPVTGRTHQIRLHLQLIGLPIANDPCYGGKLHFGVNPELSKTIDETKS 362          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.38.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB48_ECTSI3.270e-17859.66Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KK40_9PHAE4.100e-12656.46PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A2P4WXF4_9STRA6.120e-7135.61RNA pseudouridylate synthase n=1 Tax=Phytophthora ... [more]
A0A5D6Y583_9STRA3.540e-7036.08PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A8K1CHM9_PYTOL6.830e-7035.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329RSN8_9STRA9.630e-6935.49PseudoU_synth_2 domain-containing protein n=9 Tax=... [more]
G4YVW7_PHYSP6.350e-6733.55PseudoU_synth_2 domain-containing protein n=4 Tax=... [more]
A0A2D4BPM1_PYTIN1.290e-6635.14RNA pseudouridylate synthase, putative n=2 Tax=Pyt... [more]
A0A7S2UKE3_9STRA6.400e-6635.50Hypothetical protein (Fragment) n=2 Tax=Attheya se... [more]
A0A024FZK7_9STRA2.420e-6534.98PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:299113..307280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LB48
PFAMsPseudoU_synth_2
Model size2508
Max annot lvl2759|Eukaryota
KEGG koko:K15454
Hectar predicted targeting categoryother localisation
GOsGO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360
Exons10
Evalue3.09e-180
EggNOG OGsCOG0564@1|root,KOG1919@2759|Eukaryota
EC5.4.99.28
Descriptionpseudouridine synthase activity
Cds size2235
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.38.8prot_A-nodosum_M_contig89.38.8Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig89 299153..307047 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870311.7631972-UTR-A-nodosum_M_contig89:299112..2991521680870311.7631972-UTR-A-nodosum_M_contig89:299112..299152Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig89 299113..299152 -
1680870311.9333434-UTR-A-nodosum_M_contig89:307047..3072801680870311.9333434-UTR-A-nodosum_M_contig89:307047..307280Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig89 307048..307280 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870311.7798877-CDS-A-nodosum_M_contig89:299152..2993351680870311.7798877-CDS-A-nodosum_M_contig89:299152..299335Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 299153..299335 -
1680870311.7971292-CDS-A-nodosum_M_contig89:299562..2999971680870311.7971292-CDS-A-nodosum_M_contig89:299562..299997Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 299563..299997 -
1680870311.8076348-CDS-A-nodosum_M_contig89:300157..3002561680870311.8076348-CDS-A-nodosum_M_contig89:300157..300256Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 300158..300256 -
1680870311.8292859-CDS-A-nodosum_M_contig89:300597..3011661680870311.8292859-CDS-A-nodosum_M_contig89:300597..301166Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 300598..301166 -
1680870311.8474474-CDS-A-nodosum_M_contig89:301501..3016441680870311.8474474-CDS-A-nodosum_M_contig89:301501..301644Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 301502..301644 -
1680870311.861449-CDS-A-nodosum_M_contig89:302180..3023001680870311.861449-CDS-A-nodosum_M_contig89:302180..302300Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 302181..302300 -
1680870311.8768406-CDS-A-nodosum_M_contig89:302670..3028151680870311.8768406-CDS-A-nodosum_M_contig89:302670..302815Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 302671..302815 -
1680870311.8903947-CDS-A-nodosum_M_contig89:303324..3034111680870311.8903947-CDS-A-nodosum_M_contig89:303324..303411Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 303325..303411 -
1680870311.9041278-CDS-A-nodosum_M_contig89:306425..3066631680870311.9041278-CDS-A-nodosum_M_contig89:306425..306663Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 306426..306663 -
1680870311.9202535-CDS-A-nodosum_M_contig89:306831..3070471680870311.9202535-CDS-A-nodosum_M_contig89:306831..307047Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig89 306832..307047 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig89.38.8

>prot_A-nodosum_M_contig89.38.8 ID=prot_A-nodosum_M_contig89.38.8|Name=mRNA_A-nodosum_M_contig89.38.8|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=745bp
MLPYLMLVPPLAQPNTPLIPLVAVEVSTYREKTVVLNRGAKHPDRRTALT
RFIGMEESCDSTEPSLPGNVEKDSATAAATATVYDDPRRVESRKPESSPP
HKARRFDTGSVDKQRSEKGRSKRQRKGDAKRARKERALAQAEKCEYYHDD
QGLRRVRPYIYDFLTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGL
LTVNGKSTDLDYVFKNNDVVCNRQAVEYRTHRHEPPVAGGDIPIVSESAD
EIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLT
IFAKTAERAGVIQKQIGAGRTRKTYLARVSGNFGQYLPPERRQAGSPSTF
AETCSAPPTRASACEAVASTDARGLTSLASKTDEGNSSADRVIEEAGGTA
SPSGSELAAIPEALDGPGELWWRYETPGECVVRGLQKEDGDDVRPNETVN
GAVPNTWDDANTAIAILSEDDGEAKEIAIRVNCPIRVLDAKDGVYECHAE
GKEAQTVIRKVAYDVSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPC
YGGKLHFGDPEARRRMEENPSLGGWKGTKRARAAATAAETVTTATTTAIP
GKGEGCSSQEDSIMANMENAHGRTAAAVGGVLRSHEDNSTSEAKLGNAHG
GVTVHQEKPGSEEGSTLGGDVTANRDEQDEEAFVIRTCSVCQGGERFTEN
QLHCVGIWLHALRYEASTFSWASKRDGAATVQVLVDSFQELIQN*
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mRNA from alignment at A-nodosum_M_contig89:299113..307280-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig89.38.8 ID=mRNA_A-nodosum_M_contig89.38.8|Name=mRNA_A-nodosum_M_contig89.38.8|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8168bp|location=Sequence derived from alignment at A-nodosum_M_contig89:299113..307280- (Ascophyllum nodosum dioecious)
AGATGGTCGATTGTGACAAGACTTCTCGTGGCATACCCCACACCGTCTGC TGCAACTCTCAAAGTTTATCCTGATGTCAGCTGTGCCTGCTGCGGCCGGA CAGCGGTTTTGTGTGTTTCTCTTGAGTATTTATCTTGTACTTGACGGAGT AGACAGCTGATTGGATGATTGTATCACAGTACGTCGTACTCACTTTCTTG ATAGAACCATCTGTGAAGTGTCCGTGAGCTCACATGTTGCCCTATCTCAT GCTTGTGCCACCGCTTGCCCAGCCCAACACACCGTTAATACCGCTGGTCG CGGTGGAAGTATCAACGTATCGGGAAAAAACTGTGGTACTCAATCGCGGT GCTAAACATCCCGACAGGAGGACAGCCCTAACACGATTTATTGGAATGGA GGAATCCTGTGATAGCACAGAGCCATCTTTACCCGGGAACGTTGAAAAGG TGATGACGAGGACGCTCTCTCGTATATCACGTCTCACGAAAAGCATCCGT TAGCAACACTTCGTCAACTGGCAAGATGAATGGATTGTATCCTGCAACAA GATTCACCCCAACATATGTGTTTCGGGGTGCTAAATCCGTCGTTGTGTGG TCTGTTTGGCTTCTCAGGATTCTGCGACAGCTGCAGCAACGGCTACGGTA TACGATGACCCCCGTCGCGTTGAATCCCGCAAGCCAGAGTCGTCACCTCC GCACAAGGCTCGCAGGTTCGATACTGGTAGCGTTGATAAGCAACGAAGTG AGAAAGGACGCAGCAAGCGACAGAGAAAAGGGGATGCCAAGCGCGCTCGC AAGGAGAGGGCCCTTGCACAAGCCGAGAAGTGCGAATACTACCACGACGA CCAGGGTGAGAACCTCTCCCGCTATACATTCTGTACAGCAGTACTTTTAT CCACACTGGGACATACGTCTCCCTCCTAGAACAATTGTACGTTTGTTCAG TATTTTGAGTATAAATCGTGCAACAGATGGAAACAGGTCCACACACCCAA CGCATGGGACAATGAACAGGCCTATGTACACATGTAGTTAAATCGAACTC ATGGTGTCCGATTCGCTGATAACACCCCACGAGGGGAACAGAGCATCACG CAACAGCAGTCCCCGGATCATACTATAACCGCGATAAGTACCGAGAAGGT GTGTATTGGATGGGCGGGGGGAGCTACTCGTAGATACGTACAGTATGGTC CTGATATTGCGTCCCGGTAAAGCTGTTAATTTCTTTGTATTTCACTTACG GCCGATGGGCCTCAACGTGCTATAAATAGGTTACCAATCCCACCTACTGC AACGTTGCCATCCTGCCTGTGGTCACAAGGGAACTTCCCATCTCACCCTA GTTTTTGCCTACGAGTTGTTATGGCGATGCAAGTTCAGCTTTCTTGCACC TCGTCAACTAATGGTTGAATTTTACTTACTCACGTTCTTTGCAACAAATT GCGACAGGAGTACGATACCATGTACAGTAGTAGCTCCACTGTATTTTGAG CTGTATTTGTACCTGTGCCATCAAAGATAGAACGTGTGTGCAGTGGGGTT TAGAAAAAATCTGAACGCATCTAAACCTTCCAATTATCAGTCAAAAGGTT TAGGTGGGAACAATGGCTGTAGGGACAAAAACTCTACATGGTATTAAAAG GGTTCCCCAATGGAATCACATAGGGTCAACAGTATAATATCGGGGAGAAG CCCACCGTTACACTGTACACTTACATTAATCTCCATGTAGGGACACCAAA ACAAAAGCAAACTAGTTATTTAACAGTATTTTTGGAGTAAGAGTTTCAAG TAAACAGTGATAATTCTATTGAGAAATTAAGTTAAGTGGTATTTCGAAGG CAGTCTAAGTCTACAGGTCATAAATGTGAAGGACTCCAAATTTACAGTAC CGTATGTCGACTGATGTATACATCTGTATATGAAAGTAGGTGTTTGAAAG TTTAGTTTACTTTTAGTATCAATAATGGATTTACAGGTTATGTATGTAAA CACATGAGGCAAGCGGTACAAGTATATGTAACCATAAAACTAAAAGGTTT GAGTATCATGTGTGCATATATATTTAGCAGGTTGGGCACCAACCGAGTAT GATTGCTAATCCTGCTTATGGCCAGCTGAACGGGGCAGGGGTTCGGCTGT CCTGGCCCGCGGCAGCCCGCTCATTCTCCACACTCAGGCTCAATCATCAA TCATCAATCATCAATCATCAATCTGGTCCTTACTCATGGGCTCCTCTCCT TCCTCCCATTTTCCGCGATATATACTATAGATACTAGATACTAGCTCAAT ATAGATAACGGTGTCCATCTATACACAGTCAACCGCCATCGGGTCAGTCC CGAGTTTATCAGGTCACGTAATTGCATGCCGATGCCGGTCTCCGCCGAGA GTCCGCCTGACAGGGCCAGTAGTTCTCAGGGTAGCGTGAATAGCGAGGGC TTCTTTTGCAGGTACAGTAACCCCATAGATCAATTAACATGCACCTCTTT TTCCCCACACCCACTACTGGTACACTATCAGTAGGCATACTGTTCTTCCA ACTTGAGACCAAAGCAAACACTGACTGTACAGTATCCGATTTACGTCCCC ATTTGTCATTATAGTCAATACAGTCACTCTACTCGCTCTTCGAAACTTCT ATCATATCATTAATATACTGTACTAGCGTATACACCATTAGAGCTATTCC GTTGATCACTTTGTACTGGAGTTATGTTCTCTGCCCTCGCGGTATCAATG TCAGCCGCACCGGTTGAGCGTGCCTTGCGCGAGGGCCAGCAGCATCAATG TCAGGACGATATCCTTGGGTACGAACTAGTGAGGCTACTGCCAAAAGTGG TGATATATTAGTTCCAGTAGTTCGTTGTTCAATCTGAACTACAAGCTATA GAGAACACTAAATGATCTAGTGGTGGTCACACTAGAGCTATACATCATCT AAATACATCGGCAATTTATGAGGCCATTGAATAGAGCTATCGCTGAGAAG GTTTGTGACTCTAGACAAGAAAGGGCAAACAGACTGTCGCTAAACAACGA ATAAAAAATAAAAACATAAACCGTTGTGAAATAGTTTATAAAACCTCCCT AATCTATATCGCGCAGCAGCCTGATCAATTTAGGACCAGTTACTGTCTAC CCACCTTCAGCGCCCTCTGCAACAGAGCGGTGAAAACACGCTCTCATCAG TTTTAGAAACAAAACCCGAGTTTCTCATCGAGAAAGAAAGTATAGGAAAT GTTTACCAAGGTCAATCGCAATGGAGAGCATGGGCTGTAAGCTGTAGACT CGGTACGCCAGCTGGAATCTCGAAGTCCAACGCACTGAATTTTCTTGAGA AAATACCAAAATCCTGCCCATTAGTCACTCCAGGTTGGCTCTCGTAGGAA TAAATCACAGCGAAATCAGAGAGCAGCTTTCCTTTTCTAGACCTCCCAGT TCTCACCTATGAGTTCTCGCGCTCAGGATTTCTGCATTCCCTTGGCTCTT GGCCGATCGAGCTGCCCTTCGCCCTCGTCACAGGTGGTGCAACATAACAT GACATGACTATACTATTAATAGCCTCAAATACGTGCAACAGTAGGCTCAC GCGTGCTACGGGCTTTCCGCGATAACATCACTTGCCTCGGCGTGCGCGGC CTCACGGATAGCAACGAGTTTGTTTGCTACGAAGTGCTCGAAAACGGCGC ACCTGGTGAACACCATCCTGAATTCTCTACTAAAATTTTGCACGAGTACC GAACGCCGTAGACTGCAGGTACAGACACAGTACCGTCACTTGAACAAAAT GTATTTTGACATACCTATAGTGGACGTTTGCGTTTGTCGTTGCCCTTGTT ATTTGTTTTTTGTGTTAAGGACTGCGAAGGGTGCGGCCGTACATCTACGA CTTCCTAACGCACGCCAAGGAACGCTGGCTTGGGAGGAAGGTCATCGATG TGTTCAGTGAGTTACTTACGTCTCATTTAAAACAATAAATTCCAAATGCG GCGTGTAGTGACCAAACCTTTGCTATGATTGGCCGTTCGTCTACCATCGT TATACGCCATATCAGTAACCGCTATTAATAGAGCTTCTTCGTTCCTTAGG CATGTAGGGCTGAACGCAGAGACTCAGCATGCACAATACAATGTTTGAGA TAAATCTAAAAAAAACTAACCACAGTGCAACGTTTGATGGGTTACTACAT CAGCGCATTAGTCAAGTAATACTATAACAATAGGACGTTAATTAGTATCA GTATTTATACTACTACTACTATTAATGCGAATAGTACGTTGGTAATATTA ATAGTACCTGGTACTCTGTACATCACATCCCAAAGGACCACAGGTGGAAT TGGCAGCGTTTCGGTTGGAGAGAATATTGAGCTATGCATAGCACGTTGAT GGCCTCAGTGGCATAGCGTGAGACGGAAAAAACGAAACAAAATCACGGCC AGTCTTTCCAAACAGGCGCGGAGTTCGGAGGAAACCCGCGCAGCTACTAC GAGCAGGCAATCCGCTGCGGACTGCTGACGGTCAACGGCAAGTCGACAGA TCTCGACTACGTGTTCAAGAATAATGATGTAGTGTGCAACAGGCAAGCTG TTGAATACCGGTACCTGGTGGTAGAGATATTAGAGATACAGTATACCTCC TGCGTTCGCTGTACAGCAACCGTGTGTATACAAGAGATACTAGATTATCG ACGCGTTGAATGCTACGTGTACCAAATAGTCTTGGAACTCCCTAAAATCA AGTGAGGTGACAGATTGTCTCAAGCTTTGTCTGTAGGAGTATATCCATAA ATCTTGTAACTACATTTTTCTTCACCAGGTTTGGGGCGTAATTTGGGCAA AGGATAAGACCACAATCTTGCTCCACCCCAAAGGTGTTGATGTAGTTTTA CATATTTCCAGGATATCGTGAGGGAGTGTGGTAGTATCTAAATGCCACGT GCTGACGATGCTGGAATACGCCCAATGTAGGACACATCGCCACGAGCCCC CCGTGGCCGGCGGAGACATACCGATCGTAAGCGAATCGGCGGACGAGATC GTGGTGGATAAGCCCTGCACCGTGCCCATACATCCGTGCGGCTCCTACAG GTCGGCGATGCACTCAAAAGATACCGTTTCACTGGAGTCGGTCAGTTTTA CTCCGAAGGGCCTGTCAATCACAATGTCTGTTTTCTCCTGTCTGTTGTAG GGTCCTATTAAATAGGCTATGGATGGAGGTTTCACGGTTCCTCAACAACG AAGAAAAATAGTTAGTAGTCGTATTATTATAGCCATTGTATTATTTAGTA GCTCTCTTCTACCCGAACCTCGTATTTTCGCATACATACGTGGAAATTGT CGCCAATTTTCTGTCTGCTGCACTATTTATTGTATACCAAAAGGCTATGC TGGTTTATTTAATCTTTGCCAGCCTTTAGGAAGCGAATACCCTTCACTCG TAATTCCGCGGACGCTCTTATCACCTCCGATATTGTACGATAGTATGTAT CGCATATGATATTAATAGTATGTTCACTGTACGATAGTGGGTGTGGCAAA ACAGAGGCGTACATTGATTGGTGCATGGAGTTACCTGATTAACTTTACTG AACGTGCTGACGGTACATTGCGTACGTTTTCAAAAGGTTCAACACGCTGT TCTACATTCTCCAGCGACAGAGGCCGGAACTATCGCTCCGCGTGTGCCAC CGCTTGGACCGATTAACGTCGGGTTTGACCATATTCGCCAAGACAGCAGA GCGGGCAGGTGTTATCCAGAAGCAGATTGGTGAGCACAACGCGTTCTGAT GGGTGAGCGGCCATGAGCCCCTCCATGTTGTGGTGTACCCTCTCCATCGT GCTCGTCTCAAACTTTCAAGCTATATTTTATGGTGTTCATATCGCTCTTT CCCATGTCTAGCTCCAGGTTCACAACGATTAGGCATCAACTCGCAGGCAG ACTTTAGGTAAGTCCATCATCCCGTACACCTCGGAAATGACTACACTGGA CTGCACCCGTAGATCATAAATGCCACAGTGTCTGCACAATATCACCGCCA TCTTGCACTGATTTTATGTAGTTATTTTTCTCGCTTTTGCCACCCCTAAC CTCGATCGCCGCAGGCGCCGGCAGGACTCGAAAAACCTATCTGGCGAGGG TCTCCGGAAATTTCGGCCAATACCTTCCGCCGGAGCGTCGTCAAGCGGGT TCTCCCTCCACTTTCGCGGAAACTTGCTCCGCACCGCCAACGCGAGCAAG TGCTTGCGAGGCTGTGGCAAGCACAGATGCGAGAGGTCTCACGTCCCTTG CCTCCAAGACTGACGAGGGCAACAGCTCGGCTGACAGGGTCATCGAGGAG GCTGGGGGCACCGCATCTCCGTCCGGCTCTGAGCTGGCGGCGATCCCTGA GGCGCTGGATGGCCCGGGAGAGCTATGGTGGAGGTACGAGACCCCGGGGG AATGTGTTGTCCGTGGCCTTCAGAAGGAAGACGGCGACGATGTCAGACCG AATGAAACGGTGAATGGGGCAGTGCCAAATACTTGGGATGATGCTAACAC AGCTATCGCGATCTTGTCTGAGGATGATGGCGAGGCCAAGGAGATAGCGA TTCGGGTGAATTGCCCCATTCGTGTGCTGGACGCTAAGGACGGTGTCTAC GAGTGTCACGCCGAAGGAAAGGAAGCGCAAACGGTGGGTGAGGACCTTGG TACGACTGCAGCTTGAGTGTCACGCTGCACCACAAATAGATGGACGTCTC ACATTGCTTAATATTCCTGGATTATTGTGTTGTATTTGAATTCGGGCGTT CTGGGGCTGCCAGGGCTAAATATTTCGGTCAGGTCGAGGAGTCGATCGAG GCGCCTTCCATTTACATAAGCAGATCTGCCGATAAAACTAGAAATAGTCT GCCAGGAGCACCTTTGATCCTGCCTCTACGATGGCGGCAAAAATATAAAT CTCTTCAGGGAGGTGTCGAGTAATCGATTTCTGCTGAAAGGCCAGCGTCC TGATCCTGCGGGCGCCGCGTCCAGGTTATTCGGAAGGTTGCCTACGACGT CTCAAGCGACACGTCCGTGTTGGAGTGTACACCGGTGCACGGTAGGACCC ACCAGATTCGCCTACACTTGCAAGTGAGAATGAGGCTTGGTGTGCGAAGG GAGTATCCGGTCTCGTTTGTAGGGACGAACATCAACACCTCTGCGACTTA AAAAATCATATTGAGGCCGCATGTGTTGACCGATATACATGTAGCTGTGT CTCATATTTCCTGTTGTTCCATCCTTAATGCAGTGGGTTGGCCATCCGAT AGCCAACGACCCTTGCTACGGTGGTAAACTGCACTTCGGAGACCCCGAAG CAAGACGTCGGATGGAAGAGAATCCGTCTCTTGGCGGATGGAAAGGCACA AAACGTGCCAGAGCAGCAGCGACTGCAGCAGAAACAGTCACAACAGCTAC AACGACAGCAATACCCGGGAAAGGGGAAGGGTGTTCATCCCAAGAAGATT CCATTATGGCGAATATGGAAAACGCCCATGGACGTACTGCAGCTGCGGTT GGAGGGGTATTACGTTCACACGAGGATAATTCCACTTCGGAGGCAAAGTT AGGTAACGCCCATGGGGGTGTTACTGTACATCAAGAAAAGCCGGGGTCAG AGGAAGGCAGCACGCTTGGAGGGGATGTTACGGCGAATCGCGATGAACAA GACGAGGAGGCGTTTGTGGTGGGTTCTGACTTGTGTGCACTGGGTCAGGT CAGGTATTGCGTGATTTCTCAAATAAGGACTCGTGCTTACTGCATGACAC GTCTATTAAATACTGGTAGTTGATAACTGCGCACTAATACTGAAGTGTTC TGGTGCGAACCAGGCATTCCATGTCTGCACGCGTAGAAAGAGAGTCTCTG CGTTGACTCGAGGGCCACCCACTCTCCCATGTTTTCCCTCCTCAGATCCG GACCTGTAGCGTATGCCAAGGCGGGGAACGCTTCACGGAGAACCAGCTCC ACTGTGTTGGGATATGGCTTCATGCCCTTCGATACGAGGCTAGTACCTTT TCATGGGCATCAAAGCGTGACGGGGCTGCAACAGTACAAGTACTTGTAGA TTCTTTTCAGGAACTCATCCAAAATTGAAGACGCGTCGCCATTTCCCCCG CGGCACATCTCGTAGGAA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig89:299113..307280-

>mRNA_A-nodosum_M_contig89.38.8 ID=mRNA_A-nodosum_M_contig89.38.8|Name=mRNA_A-nodosum_M_contig89.38.8|organism=Ascophyllum nodosum dioecious|type=CDS|length=2235bp|location=Sequence derived from alignment at A-nodosum_M_contig89:299113..307280- (Ascophyllum nodosum dioecious)
ATGTTGCCCTATCTCATGCTTGTGCCACCGCTTGCCCAGCCCAACACACC
GTTAATACCGCTGGTCGCGGTGGAAGTATCAACGTATCGGGAAAAAACTG
TGGTACTCAATCGCGGTGCTAAACATCCCGACAGGAGGACAGCCCTAACA
CGATTTATTGGAATGGAGGAATCCTGTGATAGCACAGAGCCATCTTTACC
CGGGAACGTTGAAAAGGATTCTGCGACAGCTGCAGCAACGGCTACGGTAT
ACGATGACCCCCGTCGCGTTGAATCCCGCAAGCCAGAGTCGTCACCTCCG
CACAAGGCTCGCAGGTTCGATACTGGTAGCGTTGATAAGCAACGAAGTGA
GAAAGGACGCAGCAAGCGACAGAGAAAAGGGGATGCCAAGCGCGCTCGCA
AGGAGAGGGCCCTTGCACAAGCCGAGAAGTGCGAATACTACCACGACGAC
CAGGGACTGCGAAGGGTGCGGCCGTACATCTACGACTTCCTAACGCACGC
CAAGGAACGCTGGCTTGGGAGGAAGGTCATCGATGTGTTCAGCGCGGAGT
TCGGAGGAAACCCGCGCAGCTACTACGAGCAGGCAATCCGCTGCGGACTG
CTGACGGTCAACGGCAAGTCGACAGATCTCGACTACGTGTTCAAGAATAA
TGATGTAGTGTGCAACAGGCAAGCTGTTGAATACCGGACACATCGCCACG
AGCCCCCCGTGGCCGGCGGAGACATACCGATCGTAAGCGAATCGGCGGAC
GAGATCGTGGTGGATAAGCCCTGCACCGTGCCCATACATCCGTGCGGCTC
CTACAGGTTCAACACGCTGTTCTACATTCTCCAGCGACAGAGGCCGGAAC
TATCGCTCCGCGTGTGCCACCGCTTGGACCGATTAACGTCGGGTTTGACC
ATATTCGCCAAGACAGCAGAGCGGGCAGGTGTTATCCAGAAGCAGATTGG
CGCCGGCAGGACTCGAAAAACCTATCTGGCGAGGGTCTCCGGAAATTTCG
GCCAATACCTTCCGCCGGAGCGTCGTCAAGCGGGTTCTCCCTCCACTTTC
GCGGAAACTTGCTCCGCACCGCCAACGCGAGCAAGTGCTTGCGAGGCTGT
GGCAAGCACAGATGCGAGAGGTCTCACGTCCCTTGCCTCCAAGACTGACG
AGGGCAACAGCTCGGCTGACAGGGTCATCGAGGAGGCTGGGGGCACCGCA
TCTCCGTCCGGCTCTGAGCTGGCGGCGATCCCTGAGGCGCTGGATGGCCC
GGGAGAGCTATGGTGGAGGTACGAGACCCCGGGGGAATGTGTTGTCCGTG
GCCTTCAGAAGGAAGACGGCGACGATGTCAGACCGAATGAAACGGTGAAT
GGGGCAGTGCCAAATACTTGGGATGATGCTAACACAGCTATCGCGATCTT
GTCTGAGGATGATGGCGAGGCCAAGGAGATAGCGATTCGGGTGAATTGCC
CCATTCGTGTGCTGGACGCTAAGGACGGTGTCTACGAGTGTCACGCCGAA
GGAAAGGAAGCGCAAACGGTTATTCGGAAGGTTGCCTACGACGTCTCAAG
CGACACGTCCGTGTTGGAGTGTACACCGGTGCACGGTAGGACCCACCAGA
TTCGCCTACACTTGCAATGGGTTGGCCATCCGATAGCCAACGACCCTTGC
TACGGTGGTAAACTGCACTTCGGAGACCCCGAAGCAAGACGTCGGATGGA
AGAGAATCCGTCTCTTGGCGGATGGAAAGGCACAAAACGTGCCAGAGCAG
CAGCGACTGCAGCAGAAACAGTCACAACAGCTACAACGACAGCAATACCC
GGGAAAGGGGAAGGGTGTTCATCCCAAGAAGATTCCATTATGGCGAATAT
GGAAAACGCCCATGGACGTACTGCAGCTGCGGTTGGAGGGGTATTACGTT
CACACGAGGATAATTCCACTTCGGAGGCAAAGTTAGGTAACGCCCATGGG
GGTGTTACTGTACATCAAGAAAAGCCGGGGTCAGAGGAAGGCAGCACGCT
TGGAGGGGATGTTACGGCGAATCGCGATGAACAAGACGAGGAGGCGTTTG
TGATCCGGACCTGTAGCGTATGCCAAGGCGGGGAACGCTTCACGGAGAAC
CAGCTCCACTGTGTTGGGATATGGCTTCATGCCCTTCGATACGAGGCTAG
TACCTTTTCATGGGCATCAAAGCGTGACGGGGCTGCAACAGTACAAGTAC
TTGTAGATTCTTTTCAGGAACTCATCCAAAATTGA
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