prot_A-nodosum_M_contig89.36.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig89.36.2
Unique Nameprot_A-nodosum_M_contig89.36.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length289
Homology
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: D8LBH4_ECTSI (COP9 signalosome complex subunit 6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH4_ECTSI)

HSP 1 Score: 472 bits (1215), Expect = 3.430e-166
Identity = 242/288 (84.03%), Postives = 261/288 (90.62%), Query Frame = 0
Query:    1 MLHPLTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMMAYSHRRAL 288
            MLHPLTVI+ISDHHTRVS GGGAQEAGGRVIGLLFGSQNG DVSI+DAMEVACTA+G +G+ELNE L+EKQ++LY+AVYPMYEILGWYTVGTE TELDL IQRQM KFN +PLFLLMNP+PAQGSKELPVLIHESE+H LDG ++  FVQLAFQ      LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRR L+ETK GNI+VDYPLLRQISSICNQLPTM G QFSEEFMREFNDSLSV YLA VQKSAGS+NDLADKFM A+ HRR +
Sbjct:   37 MLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQ------LETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNISVDYPLLRQISSICNQLPTMDGAQFSEEFMREFNDSLSVAYLASVQKSAGSMNDLADKFMTAFGHRRPI 318          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: A0A6H5KLY7_9PHAE (JAB_MPN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLY7_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 7.690e-86
Identity = 130/156 (83.33%), Postives = 144/156 (92.31%), Query Frame = 0
Query:    1 MLHPLTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQAS 156
            MLHPLTVI+ISDHHTRVS GGGAQEAGGRVIGLLFGSQNG DVSI+DAMEVACTA+G +G+ELNE L+EKQ+DLY+AVYPMYEILGWYTVGTE TELDL IQRQM KFN +PLFLLMNP+PAQGSKELPVLIHESE+H LDG ++  FVQLAFQA+
Sbjct:   37 MLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKDLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSKELPVLIHESESHMLDGVAQSTFVQLAFQAT 192          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: A0A7S2B7N9_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B7N9_9STRA)

HSP 1 Score: 252 bits (644), Expect = 1.280e-79
Identity = 133/287 (46.34%), Postives = 185/287 (64.46%), Query Frame = 0
Query:    2 LHPLTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVE-LNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESE-AHTLDGRSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMMAYSHRR 286
            LHPL +I+ISDH T +  G   +  G +V+GLL+G Q GL+VSI DA E+  T LG DGV  +    +  Q+DLY+ VY  YE+LGWY+VG +A   D+ + R+M K+N++P FLLM+P+P   + +LP+ ++ES+     D    ++FV   FQ      L+T QAE+I++E +AKATPTDG++S+DLH  ++  SLRTL  R + L   L+ TK G +  DY LLRQ+SSICNQLP +   +   +F+ E+ND L V YLA V KS+ SL DL DK     SH R
Sbjct:   28 LHPLAIITISDHFTCIESGASVKPRGSKVLGLLWGKQQGLEVSIMDAQELHYT-LGDDGVPVITAEKVNSQKDLYTEVYKNYELLGWYSVGIDADGKDMAVHREMTKYNESPFFLLMHPSPDPEASDLPISLYESKMVMGADDTPTIVFVTSEFQ------LQTMQAERITMERIAKATPTDGVASLDLHINSLGASLRTLNLRFDALLAFLKATKAGEVPTDYRLLRQVSSICNQLPAVDTAELKGDFITEYNDMLMVNYLASVTKSSASLGDLIDKHSAVVSHHR 307          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: A0A7S2BCI8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BCI8_9STRA)

HSP 1 Score: 241 bits (614), Expect = 5.710e-75
Identity = 123/285 (43.16%), Postives = 184/285 (64.56%), Query Frame = 0
Query:    2 LHPLTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVELNEG-LIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMMAYSHR 285
            LHPL +I +SDH+T +  GG   + G +V+GLL+G Q GL+VSI DAME+  + L  +GV + E   +   +DLY   +   ++LGWY+VG E  E+D+ I R+M K+N++P FLLMNPNP + +K+LP+ ++ESE H ++    ++FV   FQ      L+T Q E+I     AK    +G +++DLH   VS+SL+TL +R   L + L+ TK+G +  DY LLRQ++S+CNQLP +  ++ S EF+ ++ND+L V YLA + K    LNDLA+KF M  + R
Sbjct:   35 LHPLAIIGMSDHYTTIEAGGSLAKPGSKVLGLLWGRQQGLEVSIMDAMELGYS-LDANGVPVIEAEKVNGMKDLYLENFKDRDLLGWYSVGLEVVEMDMAIHREMTKYNESPFFLLMNPNPDEEAKDLPISLYESEMHVINDTPTMLFVTCEFQ------LQTMQMERIXXXXXAKEKAHEGEATLDLHMNTVSSSLKTLSSRASALVQYLEATKNGTVPTDYRLLRQVASVCNQLPAVDTDELSGEFVGDYNDTLMVNYLASITKGTNELNDLAEKFNMISTQR 312          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: UPI000C87477B (COP9 signalosome complex subunit 6 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI000C87477B)

HSP 1 Score: 226 bits (577), Expect = 1.450e-69
Identity = 119/293 (40.61%), Postives = 185/293 (63.14%), Query Frame = 0
Query:    2 LHPLTVISISDHHTRVSM------GGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPTDGISS---IDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMMAYSHR 285
            LHPL +++ISDHHTRV        GGG+  AGGRV G + G Q G  V IF++ E+ C     +   L+   +EK+ +LY  V+P + +LGWY+ G++A E D+ I R +M  N++P+++L+NP+     K+LPV I+ESE H +DG  +LIFV+      S   +ET +AE+ISV+HVA   P+DG S+   +  H   + ++++ L +R++IL + L   + G+I +D  LLRQ+SS+  +LPTM  E+F ++F+ EFND+L +TYLA     + ++N+L DKF   Y  +
Sbjct:   13 LHPLVIVNISDHHTRVKAQGLYHGGGGSGGAGGRVFGCVIGVQRGRTVEIFNSFEILCDP---ETHTLDRPFLEKKMELYKKVFPNFYVLGWYSTGSDAQESDMLIHRALMDINESPVYVLLNPSTNPTRKDLPVTIYESELHVIDGIPQLIFVR------SNYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRVKILHQYLVAMERGDIPLDNSLLRQVSSLLRRLPTMESEKFQDDFLMEFNDTLLITYLAMFTNCSSTMNELVDKFNTMYDRQ 296          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: A0A835YT38_9STRA (JAB_MPN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT38_9STRA)

HSP 1 Score: 224 bits (572), Expect = 1.670e-68
Identity = 118/293 (40.27%), Postives = 188/293 (64.16%), Query Frame = 0
Query:    2 LHPLTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDG-RSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQ--------FSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMMAYSHR 285
            LHPL +I+ISDH+TRVS GGG      +++G+LFG ++G ++ I+DA E+    +G + + L++  + KQ +LY AVYP Y++LGWY+VG E    D+++Q+QM      P+F+L++P P + +K LPV +++SE     G  +  +FVQ +FQ      L+T QAEQI +EHVA++TP +G S+I+ HA  ++TSL  L +R+ +LRR L   + G++  D+ LLRQI+++ ++L  MG            SE   R+  D+L+VT LA +QK A +++  A KF +A+S +
Sbjct:   30 LHPLAIITISDHYTRVSTGGGVPPRDAKILGVLFGERSGAEIGIYDASEIGYDVVGGE-IVLSQASVAKQVELYEAVYPTYKVLGWYSVGLEPCPSDIKLQQQMKTHCANPIFVLLDPEPPKDAKALPVTVYQSEDQAGGGGAAATVFVQGSFQ------LQTVQAEQIGMEHVARSTPAEGSSAIERHATTMTTSLTALASRLAVLRRYLVAVRGGDVPADHKLLRQITAVTSELRAMGNASGSGGGDAALSEALARDRCDALAVTALAALQKGAAAMDAAAHKFNLAHSDK 315          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: A0A7S2S2E8_9STRA (COP9 signalosome complex subunit 6 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2E8_9STRA)

HSP 1 Score: 223 bits (568), Expect = 8.700e-68
Identity = 116/287 (40.42%), Postives = 187/287 (65.16%), Query Frame = 0
Query:    2 LHPLTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMMAYSHRRAL 288
            LHPL ++++SDH T +  G   +  G +V+G+L+G Q GL VSI DA+E+A     +    ++   + +Q+ LY  VY  +E+LGWY+VG E T +D  IQ++  K+N++P FLL+ P P   +K+LP+ ++ES+   ++   K+ FV  +FQ      L+TTQAE+I++E V+KA+ T G+SS+DLH   +S+SLR+L +R +IL   L+   D  + VD+ LLR+I+S+CNQLP    ++    F+ +FND+L + +LA + KS+ S+++L+ KF  A+S   AL
Sbjct:   57 LHPLAIVAVSDHCTGIQTGASTKPPGSKVLGILWGKQQGLQVSITDAVELAYELDAQGMPVIDPEAVNQQKSLYMEVYKGHEMLGWYSVGEEVTPVDGLIQQEFTKYNESPFFLLVQPVPDPEAKQLPLTLYESQWTQVNEEMKMTFVPCSFQ------LDTTQAERITMEAVSKASTTAGVSSMDLHVQELSSSLRSLASRTQILVSYLKAIADQQVPVDHKLLREIASVCNQLPAADAQELQGAFLSDFNDTLLINHLALITKSSNSVSELSTKFS-AFSTTSAL 336          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: F0Y0C1_AURAN (Trehalase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0C1_AURAN)

HSP 1 Score: 232 bits (592), Expect = 7.130e-66
Identity = 122/279 (43.73%), Postives = 180/279 (64.52%), Query Frame = 0
Query:    2 LHPLTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMM 280
            LHPL ++ +SDH TRV +GG        V+GLLFG Q GLDV++FDA+E++      DG +L+   ++KQ +L++ VY   E+LGWY +   AT   L + R+ + +N++PL L+M+P P+  SK+LP+ I E+E   +D    ++F  L F       LET QAE+IS+E VAK  PTDG S++D H  AV TSLRTL +R+ +L   L+    G    D+ LLRQ+S +C+ LPT G    + + MR++ND+L V+YLA V K+A ++NDL++KFM+
Sbjct:  844 LHPLAIVGVSDHFTRVKLGGARVAPDSPVLGLLFGKQVGLDVAVFDAIELSMA----DG-KLDHDFLKKQAELFTDVYADRELLGWYCLAKSATPAHLDLHREFLAYNESPLCLMMDPEPSAESKDLPITILEAEVQVVDDVPTMLFATLPFT------LETLQAERISMEIVAKTAPTDGESALDTHVEAVDTSLRTLGSRVAVLVDYLRAVAGGKAEPDFALLRQVSGLCDTLPTGGAPDQTRDLMRDYNDALMVSYLASVTKNANAVNDLSEKFML 1111          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: A0A2D4BSB4_PYTIN (COP9 signalosome complex subunit 6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSB4_PYTIN)

HSP 1 Score: 214 bits (545), Expect = 1.700e-64
Identity = 119/291 (40.89%), Postives = 185/291 (63.57%), Query Frame = 0
Query:    2 LHPLTVISISDHHTRVSMG------GGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDG-VELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGS--KELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPT--DGISSIDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMMA 281
            +HPL V++I+DH+TR            A  A  +VIG LFG QNGLDV++FD+ E+    LG +G V +++  +  +   +S V+P +E+LGWYTVG++A + DL I R +M+FN++PLFLLM+P P   S  K+LP+ + ESE H LDG   +IFV+ +++      +ET++ E I V+ ++K  P      SS+  + G V  +++ L  ++E++ R L+  K G I+ D+ LLRQISS+CNQLP +   QF   F++E+ND++ V+YLA + K A + N + D+F MA
Sbjct:   32 IHPLVVMNIADHYTRQKRNFQHENKKAALSALPQVIGALFGVQNGLDVAVFDSFEIKYD-LGSNGDVVIDKEFLTSRIQQFSQVFPGFELLGWYTVGSKAKQSDLTIHRSIMEFNESPLFLLMDPTPQGMSTKKKLPISLFESELHVLDGSPTMIFVKTSYK------IETSEMEGICVDRISKIAPMGDSSKSSLXPYLGNVRDAIKMLQRQVEVIVRWLEAVKKGEISADHNLLRQISSLCNQLPALSSPQFDASFLQEYNDAMLVSYLATLTKGATNANTVIDRFAMA 315          
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Match: A0A804J0M7_MUSAM (COP9 signalosome complex subunit 6 n=6 Tax=Zingiberales TaxID=4618 RepID=A0A804J0M7_MUSAM)

HSP 1 Score: 213 bits (542), Expect = 2.920e-64
Identity = 116/292 (39.73%), Postives = 179/292 (61.30%), Query Frame = 0
Query:    2 LHPLTVISISDHHTRV--------SMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAMEVACTALGKDGVELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLRIQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQLAFQASSLLLLETTQAEQISVEHVAKATPTDGISS---IDLHAGAVSTSLRTLLARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMREFNDSLSVTYLACVQKSAGSLNDLADKFMMAY 282
            LHPL +++ISDHHTRV        S    A+  GGRV G + G Q G  V IF++ E+    L      L+   +EK+++LY  V+P + ILGWY+ G+EA E DL+I + +M  N++P+++L+NP      K+LPV I+ESE H +DG  +LIFV+      S   +ET +AE+ISV+HVA   P+DG S+   +  H   + ++++ L +RI ++ + L   + G+I +D   LRQ+SS+  +LP M  E+F ++F+ E+ND+L V YLA +   + +LN+L DKF   Y
Sbjct:   14 LHPLVIVNISDHHTRVRAQIQHSASAAPLAEGGGGRVFGCVIGVQRGRTVEIFNSFELLYDPLTHS---LDRSFLEKKQELYKKVFPNFYILGWYSTGSEAQESDLQIHKALMDINESPVYVLLNPLINHAQKDLPVTIYESELHIIDGIPQLIFVR------SNYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVVHQYLVAMQKGDIPLDNSFLRQVSSLLRRLPAMESEKFQDDFLMEYNDTLLVAYLAMLTNCSSTLNELVDKFNTTY 296          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig89.36.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBH4_ECTSI3.430e-16684.03COP9 signalosome complex subunit 6 n=1 Tax=Ectocar... [more]
A0A6H5KLY7_9PHAE7.690e-8683.33JAB_MPN domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S2B7N9_9STRA1.280e-7946.34COP9 signalosome complex subunit 6 n=1 Tax=Dictyoc... [more]
A0A7S2BCI8_9STRA5.710e-7543.16COP9 signalosome complex subunit 6 n=1 Tax=Florenc... [more]
UPI000C87477B1.450e-6940.61COP9 signalosome complex subunit 6 n=1 Tax=Dioscor... [more]
A0A835YT38_9STRA1.670e-6840.27JAB_MPN domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2S2E8_9STRA8.700e-6840.42COP9 signalosome complex subunit 6 n=1 Tax=Rhizoch... [more]
F0Y0C1_AURAN7.130e-6643.73Trehalase n=1 Tax=Aureococcus anophagefferens TaxI... [more]
A0A2D4BSB4_PYTIN1.700e-6440.89COP9 signalosome complex subunit 6 n=1 Tax=Pythium... [more]
A0A804J0M7_MUSAM2.920e-6439.73COP9 signalosome complex subunit 6 n=6 Tax=Zingibe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 1..181
e-value: 3.4E-40
score: 139.2
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 2..283
NoneNo IPR availablePANTHERPTHR10540:SF8COP9 SIGNALOSOME COMPLEX SUBUNIT 6coord: 2..283
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 166..275
e-value: 1.1E-18
score: 67.7
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 2..110
e-value: 4.0E-11
score: 42.9
IPR033859COP9 signalosome subunit 6CDDcd08063MPN_CSN6coord: 2..287
e-value: 1.64258E-79
score: 240.618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig89contigA-nodosum_M_contig89:293228..298426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig89.36.2mRNA_A-nodosum_M_contig89.36.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig89 293200..299642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig89.36.2 ID=prot_A-nodosum_M_contig89.36.2|Name=mRNA_A-nodosum_M_contig89.36.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=289bp
MLHPLTVISISDHHTRVSMGGGAQEAGGRVIGLLFGSQNGLDVSIFDAME
VACTALGKDGVELNEGLIEKQRDLYSAVYPMYEILGWYTVGTEATELDLR
IQRQMMKFNQAPLFLLMNPNPAQGSKELPVLIHESEAHTLDGRSKLIFVQ
LAFQASSLLLLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTL
LARIEILRRLLQETKDGNIAVDYPLLRQISSICNQLPTMGGEQFSEEFMR
EFNDSLSVTYLACVQKSAGSLNDLADKFMMAYSHRRAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024969Rpn11/EIF3F_C
IPR000555JAMM/MPN+_dom
IPR033859MPN_CSN6