prot_A-nodosum_M_contig8894.1.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8894.1.2
Unique Nameprot_A-nodosum_M_contig8894.1.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length165
Homology
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 1.310e-62
Identity = 107/149 (71.81%), Postives = 124/149 (83.22%), Query Frame = 0
Query:    1 MGHGGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAIDE-IYGSDHPEIATDLNNWA 148
            +G  GYRVHDL+LEFVK  ++A+ EM++KATALQAQYLGR+DV KSYGDPEHGAG QGLFFLDALWRSVEKLSG+  LEVASYRASLGELES EAT +VAS Y  VG LF +QGK+ EA+PLY RS AI E + G +HP++AT LNN A
Sbjct:  322 VGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQGKFTEAEPLYGRSQAIQEKVLGPEHPDVATSLNNRA 470          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 8.980e-59
Identity = 106/154 (68.83%), Postives = 123/154 (79.87%), Query Frame = 0
Query:    1 MGHGGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAIDE-IYGSDHPEIATDLNNWARLLSQ 153
            +G GGYRVHDL+LEF K  ++A+ E +KKATALQAQYLGRLDV + YGDPEHGAG QGLFFLDALWRSVEKLSG+  LEVASY  SLGELES EAT  VA  Y  VG LF +QGKY EA+PLY+RSLAI E + G +HP++AT L+N A LL +
Sbjct:  581 VGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLER 734          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 3.160e-58
Identity = 104/147 (70.75%), Postives = 119/147 (80.95%), Query Frame = 0
Query:    1 MGHGGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAIDE-IYGSDHPEIATDLNN 146
            +G GGYRVHDL+LEF K  ++A+ E +KKATALQAQYLGRLDV +SYGDPEHG G QGLFFLDALWRSVEKLSG+ GLEVASYRASL ELES EAT  VA+ Y  VG LF +Q KY EA+PLY+RS AI E + G +HP +AT LNN
Sbjct:  564 VGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 8.640e-54
Identity = 97/149 (65.10%), Postives = 118/149 (79.19%), Query Frame = 0
Query:    1 MGHGGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAIDE-IYGSDHPEIATDLNNWA 148
            +G GGYR+HDL+L+F K  ++A+ E +K+ATALQAQYLGRLDV +SYGDPEHGAG QG+FFLDALWRSVEKLSG+  LEVASYRASLG LE  EAT   A  Y  VG LF +QGKY++A+ LYKRSLA  E + G +HP++A  LN+ A
Sbjct:  365 VGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAARSYFSVGFLFNVQGKYDDAESLYKRSLATQEKVLGQEHPDVAQSLNDLA 513          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 2.680e-52
Identity = 96/152 (63.16%), Postives = 120/152 (78.95%), Query Frame = 0
Query:    1 MGHGGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAIDE-IYGSDHPEIATDLNNWARLL 151
            +G GGYRVHD++LEF K  ++AD E ++KATALQAQ+LGRLDV KSY DPEHGAG +GLFFLD+LWRSVEKLSG+  LEV +YRASL ELES +AT ++AS Y+ VG LF  Q KY EA+PL++R+ A+ E + G +HP +A  LNN A LL
Sbjct:  539 VGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLL 690          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.370e-51
Identity = 97/154 (62.99%), Postives = 115/154 (74.68%), Query Frame = 0
Query:    1 MGHGGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAIDE-IYGSDHPEIATDLNNWARLLSQ 153
            +G GGYRVHDL+LE+ K +++ADAEM++K TALQA +LGRLDV KSY DPEHGAG Q LFFLDALWRSVEKLSG+  LEVA        LES EAT  VA  Y  VG LF +QGKY EA+PLY+RS AI E + G +HP++ T LNN A LL +
Sbjct:  556 VGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVA--------LESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEK 701          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.140e-46
Identity = 87/143 (60.84%), Postives = 111/143 (77.62%), Query Frame = 0
Query:    5 GYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAI-DEIYGSDHPEIATDLNN 146
            GYRVHDL+L+++++K+K D E +KKATALQAQYLGRLDV  SYGD +HGA  QGLF L  LWR +EKLSG+  LE ASYRA LGEL+S EATAEVA+    V  L+ +QGK+ EA+PLY+RS  I +++ GS+H ++A  LNN
Sbjct:  562 GYRVHDLLLKYLRVKIKQDGERVKKATALQAQYLGRLDVVMSYGDQKHGADNQGLFGLGTLWRCLEKLSGDPVLETASYRAILGELDSCEATAEVANCLEWVALLYDIQGKFAEAEPLYERSQTILEKVLGSEHSDVAKALNN 704          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: A0A6H5JY23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY23_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 7.300e-45
Identity = 77/122 (63.11%), Postives = 95/122 (77.87%), Query Frame = 0
Query:   26 MLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAIDEIY-GSDHPEIATDLNN 146
            M++KAT LQA +LG LDV K Y +PEHGA  QGLF LDALWRSVEKLSG+  LEVASY  SLGELES +AT +VAS Y+ VG LF +QG+Y +A+PLY++S AI E + G +H ++AT LNN
Sbjct:    1 MVEKATTLQAHFLGTLDVLKDYENPEHGADNQGLFVLDALWRSVEKLSGDSELEVASYSTSLGELESCKATTDVASSYSFVGFLFNIQGEYTQAEPLYEKSQAIQEKFLGQEHSDVATSLNN 122          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 4.900e-43
Identity = 90/155 (58.06%), Postives = 105/155 (67.74%), Query Frame = 0
Query:    1 MGHGGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKLQGKYEEAKPLYKRSLAIDEIYGSDHPEIATDLNNWARLLSQTG 155
            +G GGYRVHDL+L+FVKIK+KAD EM KK  ALQAQ+LGRL+V KSY  PEHGAG QGLF LDALWRSVE+LSG+  LEV SY  SL  LES EAT  VAS Y+ VG LF +Q   E+             I G +H ++A  L N A+LL   G
Sbjct:  458 VGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSLAALESCEATTVVASSYSSVGFLFSIQAIQEQ-------------ILGPEHLDVAMSLINRAQLLRAQG 599          
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Match: A0A6H5J6Q8_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 3.150e-22
Identity = 69/165 (41.82%), Postives = 95/165 (57.58%), Query Frame = 0
Query:    4 GGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSY---GDPEHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVASFYALVGTLFKL--------QGKYEEAKPLYKRSLAIDEI-YGSDHPEIATDLNNWARLLSQTGQ 156
            G +RVHDL+L+F + +   + E+L +A   Q+QYL RL V + Y   GDP      +GL+ L  LWR + +  GN  +EV +Y ASLGEL   E+ A  A  ++ VG L  L        QGK +EA PLY R++ I E   G +H ++AT LNN ARLL   G+
Sbjct:  469 GSFRVHDLLLDFARTR--CEKEILDEAVKRQSQYLRRLAVLQDYRAKGDP-----LEGLYSLIVLWRKLAEHCGNEQVEVEAYHASLGELGDDES-AGAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARLLRVQGK 625          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8894.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LJA6_9PHAE1.310e-6271.81NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI8.980e-5968.83NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI3.160e-5870.75NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI8.640e-5465.10NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LGG5_ECTSI2.680e-5263.16NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE1.370e-5162.99NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LPV9_ECTSI1.140e-4660.84NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5JY23_9PHAE7.300e-4563.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU94_9PHAE4.900e-4358.06NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5J6Q8_9PHAE3.150e-2241.82NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 102..156
e-value: 9.1E-9
score: 35.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 64..158
e-value: 5.2E-14
score: 53.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 83..156
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 100..133
score: 8.9979

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8894contigA-nodosum_M_contig8894:5622..7402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8894.1.2mRNA_A-nodosum_M_contig8894.1.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8894 3514..12202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8894.1.2 ID=prot_A-nodosum_M_contig8894.1.2|Name=mRNA_A-nodosum_M_contig8894.1.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=165bp
MGHGGYRVHDLILEFVKIKMKADAEMLKKATALQAQYLGRLDVSKSYGDP
EHGAGRQGLFFLDALWRSVEKLSGNFGLEVASYRASLGELESYEATAEVA
SFYALVGTLFKLQGKYEEAKPLYKRSLAIDEIYGSDHPEIATDLNNWARL
LSQTGQVCGGRATL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat