prot_A-nodosum_M_contig888.6.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: A0A6H5JR04_9PHAE (Small nuclear ribonucleoprotein Sm D1 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR04_9PHAE) HSP 1 Score: 199 bits (505), Expect = 7.190e-64 Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQKPGRVKDGGRGRGRGM 103
MKLVRFLMKMNNETVTVELKNGTTVHGTV+SVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGN+IRCYILPDNLNLDQLLIDD PKQKPG+VKDG RGRGRGM
Sbjct: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVASVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNNIRCYILPDNLNLDQLLIDDAPKQKPGKVKDGARGRGRGM 103
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: A0A835YYQ8_9STRA (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ8_9STRA) HSP 1 Score: 156 bits (394), Expect = 5.340e-47 Identity = 76/95 (80.00%), Postives = 84/95 (88.42%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQKPGRVKDG 95
MKLVRFLMK+NNETVT+ELKNGTTVHGTV+ VDV+MNTHLK VKVTPKG+N D+LSIRGN+IRCYILPDN+NLDQLLIDD PK KPG K G
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTTVHGTVAGVDVNMNTHLKGVKVTPKGRNTQDCDTLSIRGNNIRCYILPDNINLDQLLIDDAPKAKPGIPKAG 95
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: T0RK40_SAPDV (Small nuclear ribonucleoprotein Sm D1 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=T0RK40_SAPDV) HSP 1 Score: 151 bits (381), Expect = 4.090e-45 Identity = 73/88 (82.95%), Postives = 82/88 (93.18%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQK 88
MKLVRFLMK++NETVT+ELKNGT VHGTV+ VD+SMNTHLK VK+T KGKNPT+ DSLSIRGN+IRCYILPD+LNLD LLIDDTPKQK
Sbjct: 1 MKLVRFLMKLSNETVTIELKNGTVVHGTVTGVDISMNTHLKAVKMTVKGKNPTSLDSLSIRGNNIRCYILPDSLNLDTLLIDDTPKQK 88
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: A0A7S2FU32_9STRA (Small nuclear ribonucleoprotein Sm D1 (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FU32_9STRA) HSP 1 Score: 150 bits (380), Expect = 8.170e-45 Identity = 75/102 (73.53%), Postives = 87/102 (85.29%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQKPGRVKDGGRGRGRG 102
MKLVRFLMK+NNETVT+ELKNGT V GTV+ VDV+MNT++KNVKVT KGKN YD+LSIRGN+IR Y+LPD++NLD LLIDD PKQK +V GGRG GRG
Sbjct: 22 MKLVRFLMKLNNETVTIELKNGTVVQGTVAGVDVAMNTYMKNVKVTVKGKNTVNYDTLSIRGNNIRYYLLPDSINLDALLIDDAPKQKAPKVAAGGRGPGRG 123
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: A0A7S2V5U0_9STRA (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5U0_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.240e-43 Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQK--PGRVKDGGRG 98
MKLVRFLMK+NNETVT+ELKNGT VHGTV+ VDVSMNT+L+NVK+T K KNP + ++LSIRGN+IR Y+LPDNLNLD LLIDDTPKQK PG GGRG
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTVVHGTVAGVDVSMNTYLRNVKMTVKQKNPVSLETLSIRGNNIRYYLLPDNLNLDTLLIDDTPKQKVRPGVAMRGGRG 100
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: K3WSY3_GLOUD (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSY3_GLOUD) HSP 1 Score: 147 bits (370), Expect = 3.700e-43 Identity = 74/102 (72.55%), Postives = 88/102 (86.27%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQK--PGRVKDGGRGRG 100
MKLVRFLMK++NETVT+ELKNGT VHGT++ VD+SMNTHLK+VK+T KGKNP + DSLSIRGN+IR YILPD+LNLD LLI+DTP++K G GGRGRG
Sbjct: 1 MKLVRFLMKLSNETVTIELKNGTIVHGTITGVDISMNTHLKSVKMTVKGKNPVSLDSLSIRGNNIRYYILPDSLNLDTLLIEDTPREKVKAGAPAAGGRGRG 102
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: W7T3T7_9STRA (Small nuclear ribonucleoprotein Sm D1 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T3T7_9STRA) HSP 1 Score: 145 bits (367), Expect = 7.090e-43 Identity = 75/102 (73.53%), Postives = 86/102 (84.31%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQKPGRVKDGGRGRGRG 102
MKLVRFLMK+NNETVT+ELKNGTT+ GT+S VDVSMNT+LKNVKVT KGKNP +Y+SLSIRGN+IR YILPD LNLD LL+DD PK K +K G + GRG
Sbjct: 1 MKLVRFLMKLNNETVTIELKNGTTIQGTISGVDVSMNTYLKNVKVTLKGKNPVSYESLSIRGNNIRYYILPDALNLDALLVDDGPKNK---LKPGAQAGGRG 99
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: A0A024TLD1_9STRA (Small nuclear ribonucleoprotein Sm D1 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLD1_9STRA) HSP 1 Score: 145 bits (366), Expect = 8.900e-43 Identity = 71/88 (80.68%), Postives = 80/88 (90.91%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQK 88
MKLVRFLMK+ NETVT+ELKNGT VHGT+S VD+SMNTHLK VK+T KGKNPT+ DSLSIRGN+IR YILPD+LNLD LLIDD+PKQK
Sbjct: 1 MKLVRFLMKLTNETVTIELKNGTVVHGTISGVDISMNTHLKVVKMTVKGKNPTSLDSLSIRGNNIRYYILPDSLNLDTLLIDDSPKQK 88
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: A0A7S2SJR6_9STRA (Small nuclear ribonucleoprotein Sm D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJR6_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.650e-42 Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQKPGRVKDG 95
MKLVRFLMK+N ETVT+ELKNGT V GTV+ VDV+MNT++KNVK+T KGKN YDSLSIRGN+IR YILPDNLNLD LLIDDTPK KP +V+ G
Sbjct: 23 MKLVRFLMKLNKETVTIELKNGTVVQGTVAGVDVAMNTYMKNVKLTVKGKNTVHYDSLSIRGNNIRYYILPDNLNLDTLLIDDTPKAKPPKVQTG 117
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Match: A0A397E2M2_9STRA (Small nuclear ribonucleoprotein Sm D1 n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A397E2M2_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.300e-42 Identity = 71/88 (80.68%), Postives = 80/88 (90.91%), Query Frame = 0
Query: 1 MKLVRFLMKMNNETVTVELKNGTTVHGTVSSVDVSMNTHLKNVKVTPKGKNPTTYDSLSIRGNHIRCYILPDNLNLDQLLIDDTPKQK 88
MKLVRFLMK+ NETVT+ELKNGT VHGT+S VD+SMNTHLK VK+T KGKNPT+ DSLSIRGN+IR YILPD+LNLD LLIDD+PKQK
Sbjct: 32 MKLVRFLMKLTNETVTIELKNGTVVHGTISGVDISMNTHLKVVKMTVKGKNPTSLDSLSIRGNNIRYYILPDSLNLDTLLIDDSPKQK 119 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig888.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig888.6.1 ID=prot_A-nodosum_M_contig888.6.1|Name=mRNA_A-nodosum_M_contig888.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=121bpback to top |