prot_A-nodosum_M_contig887.4.4 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig887.4.4
Unique Name	prot_A-nodosum_M_contig887.4.4
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	675

Homology

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 926 bits (2394), Expect = 0.000e+0
Identity = 554/695 (79.71%), Postives = 580/695 (83.45%), Query Frame = 0

Query:    1 MALSVAPAMSQGPTQGQQGQGN------------AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVH----EGEDAKEKGNEGKSR--GFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSG-QSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMA--GQGMYSMPYWMGAQPGMPQQPRQYMVPHMMPRGPRGPMPAYG-RGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQAQD 672
            MAL+  PAM+Q P QG                  AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATD+ GESKGYGYVHYE GVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLP+SWDD+KLREEFEKHG +TSCKVQV     +G+++KEK         GFGFVNFEEHESAVKAIEA N  E+PDGEGTTTLYCARAQKKSER RELQSKH+QVKMERMNKFQGVNVYVKNLDEGVT+D MREAF+PYGTITSARVMVDN++  QSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG MPPRG+PMA   QGMY MPYWMGAQPGMPQQPRQ+M+P MMPRGPRGPMPAYG RGNYPMPAYATPGQ    P              XXXXXXXXXXXXXXXXXXXXXXXXXXXX                        XXXXXXXXXXXX   XXXX             P AAPATNESL+AAALAAAPPEKQKNMIGERLYPLI++GQP LAGKITGMLLEMDNGELLHLLESP++L AKINEALQVLSEHQ ++
Sbjct:    1 MALNAPPAMTQAPAQGXXXXXXXXXXXXXXXXNAAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGMPYWMGAQPGMPQQPRQFMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQQQQMPGQPQPRRGAGPRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPG--------PQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQEN 687

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 673 bits (1736), Expect = 1.370e-233
Identity = 407/662 (61.48%), Postives = 462/662 (69.79%), Query Frame = 0

Query:   24 IAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEV--PDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPPRGLPMAGQ--GMYSM--PYWMGAQPG-MPQQPR--------QYMVPHMMPRG-PRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEH 668
            + P+HSASLYVGDL+ D+ E+TLFEIF+QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD  CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKALYDTFSLFGNILSCKVATD+ G SKGYGYVHYET  SAN AIAKI+GM++ GKQVHVGHFVRR++RAGQADWTN+YVK +P +WD+ KLR EF K G I S K+Q    + A        SRGFGF+NFE+HE+A  A+   NG  V  P  E T  L+C RAQK++ERQRELQ+K+E +K+ERMNK+QGVN+YVKNLDE V +  +REAF+  GTITS R+M D  +G SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ R G+ PRG PM     GMY M  PY M  QPG MPQ PR        Q M P   PRG P    P  GRG YPMPAYA      + P+  XXXXXX                                          XXXXXXXXXXXXXX                          QA             ESLTA ALAAA PE QKNMIGERLYPLIH+ QP+LAGKITGMLLEMDNGELLHLLESP++L+AKI EALQVL  H
Sbjct:   57 VTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPA------SLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVE-TRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAM----GAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXX--------------------------QA-------------ESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA)

HSP 1 Score: 609 bits (1571), Expect = 1.360e-208
Identity = 406/669 (60.69%), Postives = 457/669 (68.31%), Query Frame = 0

Query:   23 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDE-NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMVPH-MMPRG-PRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPN-----------AAPATN---ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQ 669
            A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D  NG SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P  W D+ L +EFE  G + S  V        K+  N  ++RGFGFVN+E+ ESA KA++A NG   P GEG  T +Y  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ +TDD +REAF+  GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M P  MMPRG  RGP+P   R                                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AN R HP            AAP  N   E LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKI EAL VL  HQ
Sbjct:   71 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTNGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTMWTDADLLKEFEPFGNVLSAVVM-------KDNANPEQNRGFGFVNYEDSESAHKAVDALNGKSYPAGEGLETEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIPYGAR-----------------------------------------------------------VPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHPARDAPPQGVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAHQ 672

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 603 bits (1556), Expect = 5.300e-207
Identity = 358/672 (53.27%), Postives = 417/672 (62.05%), Query Frame = 0

Query:   23 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRGPRGPM---------------PAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATN-----ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQA 670
            A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +AN AIAKINGMLIAG +V+VGHF +R  R    +WTN YVK +P  W + ++R+EFE  G + S  V    G +          +GFGFVNFE+ E A KA+EA NG    + +G+   LY  RAQK+SER+REL++K EQ+KMER++K+QGVN+YVKNLD+ +TD+ +REAF  +GTITS+R+M D T+G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQR G+  RG+PM    MY       AQP  +P Q RQ  V    MMP                      P Y      MPAY  P Q   +P                                                                                                + P AAP        E LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKI EA+QVL  HQ+
Sbjct:   21 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEVYVGHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVMKDAGAEH--------HKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDVELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRD-TAGVSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMGRGIPMGQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMMPXXXXXXXXXXXXXXXXXXXXXXPGY------MPAYGMPMQPRGQPRGRRQGPGPAGPQAGAPVNRRNFKYTANVRNQPRPEGVAPGAPAPG--------------------------------------------------VMPPAAPVQPGVPHLEPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQS 627

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE)

HSP 1 Score: 601 bits (1550), Expect = 5.070e-206
Identity = 395/669 (59.04%), Postives = 452/669 (67.56%), Query Frame = 0

Query:   23 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDEN-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMVPH-MMPRG-PRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPN-----------AAPATN---ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQ 669
            A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D   G SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P  W D+ L +EFE  G + S  V        K+  N  ++RGFGFVN+++ +SA +A++A NG   P G+G  T +Y  +AQK++ER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ ++DD +REAF   GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK+++ KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M P  MMPRG  RGP+P   R          PG                                                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AN R HP            AAP  N   E LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKI EAL VL  HQ
Sbjct:   30 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKSVPCRIMWSQRDPSLRKSGVGNIFVKNLDLSIDNKALYDTFSLFGNILSCKVAIDHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTKWTDADLLKEFEPFGHVLSAVVM-------KDNANPDQNRGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVETDIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIPYGAR---------VPGXXXXX--------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHPAREMPPQGVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAHQ 631

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: W4FQT6_9STRA (Polyadenylate-binding protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FQT6_9STRA)

HSP 1 Score: 599 bits (1545), Expect = 4.050e-205
Identity = 376/695 (54.10%), Postives = 442/695 (63.60%), Query Frame = 0

Query:   23 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVP--DGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQG-MYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRG--PRGPMPAY------GRGNYPMPAY-----------------ATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPN--------AAPA------TNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQAQD 672
            A  P+H+ASLYVGD+  +V EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +A +AI KINGMLIAG +V VGHF +R+NR   +DWTN Y+K +P +WDD+KLR EFE  G I+SC V     +D   + N    RGFGFVNFEE E+A +A +  NG  V   D      LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+  GTITSAR+M D  +G S+GFGFVCF+ PEEATKA+T+++GK+L  KPIYVALAQR+EVRR QLEAQ AQ+  +  RGLP+  Q  MY       AQP  +P Q RQ  V    M+PRG  PRGP+P        G G Y MP Y                   PGQ +  P XXXXXXXXXX                                                                                 AN R  P+        AAPA      T E LT+AALAAA P  QKNMIGERL+PLIH  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  H+ ++
Sbjct:   28 AAQPFHTASLYVGDIHPEVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEVFVGHFQKRENRPADSDWTNCYIKNIPHNWDDAKLRSEFEPFGVISSCVVM----KDTTSENN----RGFGFVNFEEPEAAREATDKLNGKVVATDDNGADIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFTAVGTITSARIMRD-PAGASRGFGFVCFATPEEATKAVTDLSGKLLNGKPIYVALAQRKEVRRAQLEAQHAQQRMVAGRGLPLQHQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMIPRGGIPRGPIPYRQPGVPGGPGGYGMPQYXXXXXXXXXXXXXXXXXGPPGQLAGPPXXXXXXXXXXXQNNRNNFKYT-----------------------------------------------------------------------ANARNQPSLQEQAPQPAAPAVAAGVPTLEPLTSAALAAASPSIQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHETEE 642

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 598 bits (1541), Expect = 1.470e-204
Identity = 388/667 (58.17%), Postives = 455/667 (68.22%), Query Frame = 0

Query:   26 PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKV--ATDE--NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGK-SRGFGFVNFEEHESAVKAIEAFNGTEV--PDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQYMVPHMMPRGPRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATNESLTA-------------AALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQAQ 671
            P+HSASLYVGDL+ DV+EA LFEIF+ VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK   CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKALYDTFSLFGNILSCKV  A D+  + E +GYGYVHYET  +AN AIAKINGMLIAGK+V+VGHFV+R +RA  +DWTNLY+K +P  W + KL +EF K G +TS K  + + +  +E     K + G+GFVN+ +HESAVKA+EA NG ++  PDGE    +Y  RAQKK+ER+REL++K E +K ER+NK+QGVN+YVKNLD+ +TD+ +RE F+ YGTITSARVM D+ +G S+GFGFVC+SAPEEATKA++E NGK++  KP+Y+ALAQRREVRR QLEAQ+A+  G +PPRG+P+   GMY      GA P            + MP G +G  P   RG   MPA                                             XXXXXXXXXXXXXXXXXXX          XXXXXXXX   XXXXXX               ++ P A P                     AALAAA PE+QKNMIGERLYPLI   QP+LAGKITGMLLEMDNGELLHLLESPEAL  KI EAL VL +H AQ
Sbjct:   11 PFHSASLYVGDLAPDVSEALLFEIFNAVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKALYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEVYVGHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKMDPVEEGAPPPKVAGGYGFVNYADHESAVKAVEAMNGLKLKHPDGE-EREMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDS-NGNSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLGQPGMY------GAMPM-----------YAMPPG-QGIPPQASRGYPMMPAMMX------------------------------------------XXXXXXXXXXXXXXXXXXXPAYAMGPLQQXXXXXXXXSGRXXXXXXGGGAPRVGGQQPGQQQVRPGAMPVPXXXXXXXXXXXXXXXXXXXAALAAATPEQQKNMIGERLYPLIQQSQPELAGKITGMLLEMDNGELLHLLESPEALATKIAEALAVLEQHNAQ 615

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA)

HSP 1 Score: 597 bits (1538), Expect = 1.270e-203
Identity = 380/656 (57.93%), Postives = 437/656 (66.62%), Query Frame = 0

Query:   26 PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRG--PRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQAQD 672
            P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    +WTN YVK +P +WDD  LR+EFE  G I+SC V     +DA  + N    RGFGFVNFEE E+A +A E  N   V   +G    LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+P GTITS R+M D  +G S+GFGFVCF+ PEEATKA+TEM+GK++  KPIYVALAQR+EVRR QLEAQ AQ+  TGM   RG+PM    MY       AQP  MP Q RQ  V    MMPRG  PRGP+P      Y  P    PG  +   M  XXXXXXXXXXXXXXXXXX                                                                      Q      P   P   E LT+AALAAA P  QKNMIGERL+PLIH  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  HQ+++
Sbjct:   70 PFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAAYEAIAKINGMLIAGTEVFVGHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVM----KDASSEQN----RGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRD-PAGNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQARQGFVYPQQMMPRGGLPRGPIP------YRQPG--VPGGPAGYGMPQXXXXXXXXXXXXXXXXXXGPPQMAGPPGQANPNANRNRNNFKYTANARNQPPV-----------------------------------QEPVPQQPGGIPQM-EPLTSAALAAASPGMQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHQSEE 672

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC)

HSP 1 Score: 595 bits (1533), Expect = 1.290e-203
Identity = 401/658 (60.94%), Postives = 453/658 (68.84%), Query Frame = 0

Query:   26 PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDE-NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTT-TLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRGPRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATN-----ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQA 670
            P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D  +G SKGYGYVHYET  +AN AIAKINGMLIAG +V VGHF +R +R   ADWTN YVK +P +WDD+ LR+EFE  G ITSC V     +DA  +GN    RGFGFVNF+E ESA KA+EA N   V   +G    LY  +AQK+SER+REL++K E +KMER+NK+QGVN+YVKNLD+ + DD +REAF+  GTITS R+M D  SG S+GFGFVCF+ PEEATKA+T+MNGK++  KPIYVALAQR+EVRR QLEAQ AQ+  +GM   RG+PM    MY       AQP  MP Q RQ  V    MMPRG                                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    AN R  P  APA       E LT+AALAAA P  QKNMIGERL+PLI   QP LAGKITGMLLEMDNGELLHLLESPEAL+ KI EA+ VL  H A
Sbjct:   27 PFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDVSIDNKALYDTFSLFGNILSCKVAIDNTSGGSKGYGYVHYETAEAANEAIAKINGMLIAGSEVFVGHFQKRQDRPDLADWTNCYVKNIPHNWDDATLRKEFEVFGSITSCVVM----KDASSEGN----RGFGFVNFDEPESAQKAVEALNDKVVGQEDGADIALYVGKAQKRSERERELRNKFEALKMERINKYQGVNLYVKNLDDQLNDDELREAFTTCGTITSCRIMKD-PSGNSRGFGFVCFATPEEATKAVTDMNGKLVSGKPIYVALAQRKEVRRAQLEAQHAQQRASGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQSRQGFVYPQQMMPRG---------------------------------------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVPPQMQGQPRNNRNNFKYTANARNQPEVAPAAPAVPVMEPLTSAALAAASPNMQKNMIGERLFPLIEKSQPSLAGKITGMLLEMDNGELLHLLESPEALEGKITEAIAVLEAHMA 618

[Close]

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD)

HSP 1 Score: 582 bits (1501), Expect = 1.200e-198
Identity = 412/689 (59.80%), Postives = 465/689 (67.49%), Query Frame = 0

Query:    4 SVAPAMSQGPTQGQQGQGNAIA-PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDEN-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFA-QRTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRGPRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHP--NAAPATN------------ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQA 670
            S +P  S   T      G A A P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D   G SKGYGYVHYET  +A+ AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P+ W D  L +EF+  GP+ S  +      DA  + N    RGFGFVNFEE E A KA+EA NG      +G+   LY  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ + DD +REAF+  GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ A QR G+   RGLPM    MY        QP  MP Q RQ  V    M+PRG                                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              AN R  P    APA              E LT+AALAAA P+ QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKI EA+QVL  HQ+
Sbjct:    5 STSPTNSPATTAASSATGAAAAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDNTTGASKGYGYVHYETAEAAHEAIAKINGMLIAGTEVFVGHFQKRQDRPDIDDWTNCYVKNIPSQWSDEDLLKEFKPFGPVLSAVIM----RDADAELN----RGFGFVNFEESEGAHKAVEALNGKVYQTADGSDLELYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLNDDELREAFASAGTITSSRVMRDQ-NGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAHQRAGLVVGRGLPMGQPPMYGAAPMFYTQPNQMPPQARQGFVYPQQMLPRG------------------------------------------------------VHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGPGAVNRRNFKYTANVRNQPPREGAPAPGAPPAAPVQVGGPEPLTSAALAAASPDVQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQS 630

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTD5_ECTSI	0.000e+0	79.71	Polyadenylate-binding protein n=2 Tax=Ectocarpus T...	[more]
A0A835YVH9_9STRA	1.370e-233	61.48	Polyadenylate-binding protein n=1 Tax=Tribonema mi...	[more]
A0A6A3LR95_9STRA	1.360e-208	60.69	Polyadenylate-binding protein n=5 Tax=Phytophthora...	[more]
A0A2D4BDJ5_PYTIN	5.300e-207	53.27	Polyadenylate-binding protein n=2 Tax=Pythium TaxI...	[more]
M4B4S0_HYAAE	5.070e-206	59.04	Polyadenylate-binding protein n=19 Tax=Peronospora...	[more]
W4FQT6_9STRA	4.050e-205	54.10	Polyadenylate-binding protein n=8 Tax=Aphanomyces ...	[more]
A0A7S2V0G2_9STRA	1.470e-204	58.17	Polyadenylate-binding protein n=2 Tax=Fibrocapsa j...	[more]
A0A6G0WN78_9STRA	1.270e-203	57.93	Polyadenylate-binding protein n=2 Tax=Aphanomyces ...	[more]
A0A067BXY4_SAPPC	1.290e-203	60.94	Polyadenylate-binding protein n=4 Tax=Saprolegniac...	[more]
K3X8Z0_GLOUD	1.200e-198	59.80	Polyadenylate-binding protein n=2 Tax=Pythiaceae T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 294..314
None	No IPR available	GENE3D	1.10.1900.10		coord: 591..674 e-value: 3.5E-34 score: 118.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 461..597
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 553..576
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 493..510
None	No IPR available	PANTHER	PTHR24012:SF466	POLYADENYLATE-BINDING PROTEIN 1-LIKE	coord: 25..667
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 25..667
None	No IPR available	CDD	cd12378	RRM1_I_PABPs	coord: 31..110 e-value: 1.483E-50 score: 168.096
None	No IPR available	CDD	cd12381	RRM4_I_PABPs	coord: 321..400 e-value: 1.9958E-48 score: 162.404
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 207..290 e-value: 4.6E-19 score: 79.3 coord: 323..396 e-value: 3.9E-28 score: 109.5 coord: 119..191 e-value: 7.2E-21 score: 85.3 coord: 31..104 e-value: 1.8E-21 score: 87.3
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 32..101 e-value: 5.0E-19 score: 67.9 coord: 120..189 e-value: 1.4E-17 score: 63.3 coord: 324..393 e-value: 4.2E-21 score: 74.5 coord: 208..282 e-value: 5.2E-15 score: 55.0
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 322..400 score: 19.877102
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 30..108 score: 16.517189
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 118..195 score: 16.14197
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 206..296 score: 16.585409
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	SMART	SM00517	poly_2	coord: 605..668 e-value: 8.1E-36 score: 135.0
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	PFAM	PF00658	PABP	coord: 601..665 e-value: 8.0E-30 score: 102.7
IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	PROSITE	PS51309	PABC	coord: 593..670 score: 22.203424
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 7..111 e-value: 2.2E-24 score: 87.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 112..197 e-value: 9.2E-21 score: 75.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 198..301 e-value: 7.4E-23 score: 82.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 302..408 e-value: 1.2E-30 score: 107.8
IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4	TIGRFAM	TIGR01628	TIGR01628	coord: 30..665 e-value: 1.2E-218 score: 726.0
IPR045305	PABP, RNA recognition motif 2	CDD	cd12379	RRM2_I_PABPs	coord: 116..192 e-value: 1.79711E-49 score: 165.032
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 204..404
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 29..198
IPR036053	PABC (PABP) domain	SUPERFAMILY	63570	PABC (PABP) domain	coord: 593..672

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig887	contig	A-nodosum_M_contig887:105891..116287 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig887.4.4	mRNA_A-nodosum_M_contig887.4.4	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig887 105522..117168 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig887.4.4 ID=prot_A-nodosum_M_contig887.4.4|Name=mRNA_A-nodosum_M_contig887.4.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=675bp
MALSVAPAMSQGPTQGQQGQGNAIAPYHSASLYVGDLSKDVAEATLFEIF
SQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQA
CRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVA
TDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRA
GQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGN
EGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTTLYCARAQKKSER
QRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITS
ARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQR
REVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQY
MVPHMMPRGPRGPMPAYGRGNYPMPAYATPGQASSRPMPGQPQQRRPAGP
RQPRGQPPPQAGRGVPHGRGMPQQPQGQGGPGRGNFKYTPAVRNQQQPAG
PNMQPQPQQPPQQQGPSGPQQPMPVPGPQANFRLHPNAAPATNESLTAAA
LAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLES
PEALQAKINEALQVLSEHQAQDGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR002004	PABP_HYD
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR006515	PABP_1234
IPR045305	RRM2_I_PABPs
IPR035979	RBD_domain_sf
IPR036053	PABP-dom