mRNA_A-nodosum_M_contig887.4.4 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig887.4.4
Unique NamemRNA_A-nodosum_M_contig887.4.4
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: D8LTD5_ECTSI (Polyadenylate-binding protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTD5_ECTSI)

HSP 1 Score: 928 bits (2399), Expect = 0.000e+0
Identity = 554/695 (79.71%), Postives = 580/695 (83.45%), Query Frame = 1 
Query:  370 MALSVAPAMSQGPTQGQQGQGN------------AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVH----EGEDAKEKGNEGKSR--GFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSG-QSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMA--GQGMYSMPYWMGAQPGMPQQPRQYMVPHMMPRGPRGPMPAYG-RGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQAQD 2385
            MAL+  PAM+Q P QG                  AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATD+ GESKGYGYVHYE GVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLP+SWDD+KLREEFEKHG +TSCKVQV     +G+++KEK         GFGFVNFEEHESAVKAIEA N  E+PDGEGTTTLYCARAQKKSER RELQSKH+QVKMERMNKFQGVNVYVKNLDEGVT+D MREAF+PYGTITSARVMVDN++  QSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG MPPRG+PMA   QGMY MPYWMGAQPGMPQQPRQ+M+P MMPRGPRGPMPAYG RGNYPMPAYATPGQ    P              XXXXXXXXXXXXXXXXXXXXXXXXXXXX                        XXXXXXXXXXXX   XXXX             P AAPATNESL+AAALAAAPPEKQKNMIGERLYPLI++GQP LAGKITGMLLEMDNGELLHLLESP++L AKINEALQVLSEHQ ++
Sbjct:    1 MALNAPPAMTQAPAQGXXXXXXXXXXXXXXXXNAAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKXXXXXXXXXGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGGMPPRGMPMAPGAQGMYGMPYWMGAQPGMPQQPRQFMMPQMMPRGPRGPMPAYGGRGNYPMPAYATPGQQQQMPGQPQPRRGAGPRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGNFKYTQGVRNQQPGAPNMPPQXXXXXXXXXXXXGAPXXXXMPAPG--------PQAAPATNESLSAAALAAAPPEKQKNMIGERLYPLIYEGQPALAGKITGMLLEMDNGELLHLLESPDSLAAKINEALQVLSEHQQEN 687
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BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A835YVH9_9STRA (Polyadenylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH9_9STRA)

HSP 1 Score: 673 bits (1736), Expect = 1.310e-227
Identity = 407/662 (61.48%), Postives = 462/662 (69.79%), Query Frame = 1 
Query:  439 IAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEV--PDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPPRGLPMAGQ--GMYSM--PYWMGAQPG-MPQQPR--------QYMVPHMMPRG-PRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEH 2373
            + P+HSASLYVGDL+ D+ E+TLFEIF+QVGPVASIRVCRDT+TRRSLGYAYVNFHNVADAERALDTMNFT IKD  CRIMWSQRDPS+RRSGVGN+FVKNLDET+DNKALYDTFSLFGNILSCKVATD+ G SKGYGYVHYET  SAN AIAKI+GM++ GKQVHVGHFVRR++RAGQADWTN+YVK +P +WD+ KLR EF K G I S K+Q    + A        SRGFGF+NFE+HE+A  A+   NG  V  P  E T  L+C RAQK++ERQRELQ+K+E +K+ERMNK+QGVN+YVKNLDE V +  +REAF+  GTITS R+M D  +G SKGFGFVCFS+PEEATKA+ EMN +M+ +KPIYVALAQR+EVRR QLEAQ+AQ R G+ PRG PM     GMY M  PY M  QPG MPQ PR        Q M P   PRG P    P  GRG YPMPAYA      + P+  XXXXXX                                          XXXXXXXXXXXXXX                          QA             ESLTA ALAAA PE QKNMIGERLYPLIH+ QP+LAGKITGMLLEMDNGELLHLLESP++L+AKI EALQVL  H
Sbjct:   57 VTPFHSASLYVGDLAPDITESTLFEIFNQVGPVASIRVCRDTITRRSLGYAYVNFHNVADAERALDTMNFTLIKDNPCRIMWSQRDPSMRRSGVGNVFVKNLDETIDNKALYDTFSLFGNILSCKVATDDAGNSKGYGYVHYETAESANEAIAKIDGMVVGGKQVHVGHFVRRNDRAGQADWTNIYVKNIPLAWDEEKLRSEFAKFGTINSVKIQRESSDPA------SLSRGFGFINFEDHEAAESAVSEMNGKTVSGPAVE-TRELFCCRAQKRTERQRELQAKYEALKVERMNKYQGVNLYVKNLDEAVDEAALREAFATQGTITSVRIMKDAVTGNSKGFGFVCFSSPEEATKAVQEMNNRMVASKPIYVALAQRKEVRRAQLEAQYAQQRGGLGPRG-PMGAMQPGMYGMGMPYMMPGQPGGMPQPPRAGGYPMMPQMMGPRGAPRGGPNSMQPYPGRGTYPMPAYAM----GAMPVQQXXXXXXGASGGAPQQAQAGGVPQQGNFKYTQQVRNPPAQGQAPQMGGMXXXXXXXXXXXXXX--------------------------QA-------------ESLTAQALAAASPEMQKNMIGERLYPLIHESQPELAGKITGMLLEMDNGELLHLLESPDSLKAKIQEALQVLEAH 667
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BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A6A3LR95_9STRA (Polyadenylate-binding protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LR95_9STRA)

HSP 1 Score: 609 bits (1571), Expect = 7.900e-203
Identity = 406/669 (60.69%), Postives = 457/669 (68.31%), Query Frame = 1 
Query:  436 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDE-NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMVPH-MMPRG-PRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPN-----------AAPATN---ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQ 2376
            A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D  NG SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P  W D+ L +EFE  G + S  V        K+  N  ++RGFGFVN+E+ ESA KA++A NG   P GEG  T +Y  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ +TDD +REAF+  GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M P  MMPRG  RGP+P   R                                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AN R HP            AAP  N   E LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKI EAL VL  HQ
Sbjct:   71 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTNGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTMWTDADLLKEFEPFGNVLSAVVM-------KDNANPEQNRGFGFVNYEDSESAHKAVDALNGKSYPAGEGLETEMYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLTDDELREAFAECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQQRAGMVVGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIPYGAR-----------------------------------------------------------VPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHPARDAPPQGVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALTVLEAHQ 672
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BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A2D4BDJ5_PYTIN (Polyadenylate-binding protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BDJ5_PYTIN)

HSP 1 Score: 603 bits (1556), Expect = 2.930e-201
Identity = 358/672 (53.27%), Postives = 417/672 (62.05%), Query Frame = 1 
Query:  436 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRGPRGPM---------------PAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATN-----ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQA 2379
            A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +AN AIAKINGMLIAG +V+VGHF +R  R    +WTN YVK +P  W + ++R+EFE  G + S  V    G +          +GFGFVNFE+ E A KA+EA NG    + +G+   LY  RAQK+SER+REL++K EQ+KMER++K+QGVN+YVKNLD+ +TD+ +REAF  +GTITS+R+M D T+G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ AQR G+  RG+PM    MY       AQP  +P Q RQ  V    MMP                      P Y      MPAY  P Q   +P                                                                                                + P AAP        E LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKI EA+QVL  HQ+
Sbjct:   21 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAANEAIAKINGMLIAGTEVYVGHFQKRQERPDVDEWTNCYVKNIPQXWTEEEMRKEFEPFGTVVSLVVMKDAGAEH--------HKGFGFVNFEKSEGAHKAVEALNGKVYKNPDGSDVELYVGRAQKRSERERELRNKFEQLKMERLSKYQGVNLYVKNLDDQLTDEELREAFGSFGTITSSRIMRD-TAGVSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAQRAGLMGRGIPMGQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMMPXXXXXXXXXXXXXXXXXXXXXXPGY------MPAYGMPMQPRGQPRGRRQGPGPAGPQAGAPVNRRNFKYTANVRNQPRPEGVAPGAPAPG--------------------------------------------------VMPPAAPVQPGVPHLEPLTSAALAAASPETQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQS 627
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BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: M4B4S0_HYAAE (Polyadenylate-binding protein n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4B4S0_HYAAE)

HSP 1 Score: 601 bits (1550), Expect = 2.750e-200
Identity = 395/669 (59.04%), Postives = 452/669 (67.56%), Query Frame = 1 
Query:  436 AIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDEN-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQ-RTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQ-YMVPH-MMPRG-PRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPN-----------AAPATN---ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQ 2376
            A  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D   G SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P  W D+ L +EFE  G + S  V        K+  N  ++RGFGFVN+++ +SA +A++A NG   P G+G  T +Y  +AQK++ER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ ++DD +REAF   GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK+++ KP+YVALAQR+EVRR QLEAQ AQ R GM   RG+PM    MY        QPG MP Q RQ +M P  MMPRG  RGP+P   R          PG                                                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             AN R HP            AAP  N   E LT+AALAAA PE QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKI EAL VL  HQ
Sbjct:   30 AAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKSVPCRIMWSQRDPSLRKSGVGNIFVKNLDLSIDNKALYDTFSLFGNILSCKVAIDHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRPDADDWTNCYVKNIPTKWTDADLLKEFEPFGHVLSAVVM-------KDNANPDQNRGFGFVNYDDSDSAHRAVDALNGKAYPVGDGVETDIYVGKAQKRTERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLSDDELREAFVECGTITSSRVMRD-PNGNSRGFGFVCFSTPEEANKAVAEMNGKLIVGKPVYVALAQRKEVRRAQLEAQHAQQRAGMAMGRGMPMGQPPMYGAAPMFYGQPGQMPPQARQGFMYPQQMMPRGVQRGPIPYGAR---------VPGXXXXX--------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGAPANRRNFKYTANARNHPAREMPPQGVMPPAAPVQNAGPEPLTSAALAAASPEIQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEALAVLEAHQ 631
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BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: W4FQT6_9STRA (Polyadenylate-binding protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FQT6_9STRA)

HSP 1 Score: 600 bits (1547), Expect = 1.080e-199
Identity = 380/716 (53.07%), Postives = 447/716 (62.43%), Query Frame = 1 
Query:  373 ALSVAPAMSQGPTQGQQGQGNAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVP--DGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTGMPPRGLPMAGQG-MYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRG--PRGPMPAY------GRGNYPMPAY-----------------ATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPN--------AAPA------TNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQAQD 2385
            A S AP+              A  P+H+ASLYVGD+  +V EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDP+LR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +A +AI KINGMLIAG +V VGHF +R+NR   +DWTN Y+K +P +WDD+KLR EFE  G I+SC V     +D   + N    RGFGFVNFEE E+A +A +  NG  V   D      LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+  GTITSAR+M D  +G S+GFGFVCF+ PEEATKA+T+++GK+L  KPIYVALAQR+EVRR QLEAQ AQ+  +  RGLP+  Q  MY       AQP  +P Q RQ  V    M+PRG  PRGP+P        G G Y MP Y                   PGQ +  P XXXXXXXXXX                                                                                 AN R  P+        AAPA      T E LT+AALAAA P  QKNMIGERL+PLIH  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  H+ ++
Sbjct:    7 ATSAAPSSPVANAAPATNNSAAAQPFHTASLYVGDIHPEVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKSVPCRIMWSQRDPTLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAYDLNGNSKGYGYVHYETAEAAYLAIEKINGMLIAGTEVFVGHFQKRENRPADSDWTNCYIKNIPHNWDDAKLRSEFEPFGVISSCVVM----KDTTSENN----RGFGFVNFEEPEAAREATDKLNGKVVATDDNGADIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFTAVGTITSARIMRD-PAGASRGFGFVCFATPEEATKAVTDLSGKLLNGKPIYVALAQRKEVRRAQLEAQHAQQRMVAGRGLPLQHQPPMYGAAPMFYAQPNQLPPQARQGFVYPQQMIPRGGIPRGPIPYRQPGVPGGPGGYGMPQYXXXXXXXXXXXXXXXXXGPPGQLAGPPXXXXXXXXXXXQNNRNNFKYT-----------------------------------------------------------------------ANARNQPSLQEQAPQPAAPAVAAGVPTLEPLTSAALAAASPSIQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHETEE 642
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BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A7S2V0G2_9STRA (Polyadenylate-binding protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0G2_9STRA)

HSP 1 Score: 599 bits (1544), Expect = 2.750e-199
Identity = 393/686 (57.29%), Postives = 460/686 (67.06%), Query Frame = 1 
Query:  388 PAMSQGPTQGQQGQGNAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKV--ATDE--NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGK-SRGFGFVNFEEHESAVKAIEAFNGTEV--PDGEGTTTLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQRTG-MPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQYMVPHMMPRGPRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATNESLTA-------------AALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQAQ 2382
            PA  Q PT           P+HSASLYVGDL+ DV+EA LFEIF+ VGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMN+T IK   CRIMWSQRDPSLRRSGVGNIFVKNLD +VDNKALYDTFSLFGNILSCKV  A D+  + E +GYGYVHYET  +AN AIAKINGMLIAGK+V+VGHFV+R +RA  +DWTNLY+K +P  W + KL +EF K G +TS K  + + +  +E     K + G+GFVN+ +HESAVKA+EA NG ++  PDGE    +Y  RAQKK+ER+REL++K E +K ER+NK+QGVN+YVKNLD+ +TD+ +RE F+ YGTITSARVM D+ +G S+GFGFVC+SAPEEATKA++E NGK++  KP+Y+ALAQRREVRR QLEAQ+A+  G +PPRG+P+   GMY      GA P            + MP G +G  P   RG   MPA                                             XXXXXXXXXXXXXXXXXXX          XXXXXXXX   XXXXXX               ++ P A P                     AALAAA PE+QKNMIGERLYPLI   QP+LAGKITGMLLEMDNGELLHLLESPEAL  KI EAL VL +H AQ
Sbjct:    3 PAQQQPPT-----------PFHSASLYVGDLAPDVSEALLFEIFNAVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNYTLIKGVPCRIMWSQRDPSLRRSGVGNIFVKNLDPSVDNKALYDTFSLFGNILSCKVVVAKDDQVSDEEQGYGYVHYETAEAANEAIAKINGMLIAGKEVYVGHFVKRQDRASASDWTNLYIKNIPEDWSEEKLNDEFGKFGEVTSVKAVIKKMDPVEEGAPPPKVAGGYGFVNYADHESAVKAVEAMNGLKLKHPDGE-EREMYAGRAQKKAERERELRAKFESLKAERINKYQGVNLYVKNLDDSITDEGLREEFTAYGTITSARVMRDS-NGNSRGFGFVCYSAPEEATKAVSEANGKLINGKPVYIALAQRREVRRAQLEAQYARSVGGLPPRGIPLGQPGMY------GAMPM-----------YAMPPG-QGIPPQASRGYPMMPAMMX------------------------------------------XXXXXXXXXXXXXXXXXXXPAYAMGPLQQXXXXXXXXSGRXXXXXXGGGAPRVGGQQPGQQQVRPGAMPVPXXXXXXXXXXXXXXXXXXXAALAAATPEQQKNMIGERLYPLIQQSQPELAGKITGMLLEMDNGELLHLLESPEALATKIAEALAVLEQHNAQ 615
[Close]
BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A6G0WN78_9STRA (Polyadenylate-binding protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0WN78_9STRA)

HSP 1 Score: 597 bits (1540), Expect = 3.310e-198
Identity = 384/681 (56.39%), Postives = 444/681 (65.20%), Query Frame = 1 
Query:  370 MALSVAPAMSQGPTQGQQGQGNAIAPYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRG--PRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATNESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQAQD 2385
            M+ + AP     P         +  P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D NG SKGYGYVHYET  +A  AIAKINGMLIAG +V VGHF +R +R    +WTN YVK +P +WDD  LR+EFE  G I+SC V     +DA  + N    RGFGFVNFEE E+A +A E  N   V   +G    LY  +AQK+SER+REL+ K E +KMER+NK+QGVN+YVKNLD+ +TD+ +REAF+P GTITS R+M D  +G S+GFGFVCF+ PEEATKA+TEM+GK++  KPIYVALAQR+EVRR QLEAQ AQ+  TGM   RG+PM    MY       AQP  MP Q RQ  V    MMPRG  PRGP+P      Y  P    PG  +   M  XXXXXXXXXXXXXXXXXX                                                                      Q      P   P   E LT+AALAAA P  QKNMIGERL+PLIH  QP+LAGKITGMLLEMDNGELLHLLESP+AL AKI EAL VL  HQ+++
Sbjct:   48 MSSNAAPT---SPVANNTAPATSATPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDINGNSKGYGYVHYETAEAAYEAIAKINGMLIAGTEVFVGHFQKRQDRPDSENWTNCYVKNIPQTWDDVTLRKEFEPFGAISSCVVM----KDASSEQN----RGFGFVNFEEPEAAREACEKLNNKVVSTEDGVEIELYVGKAQKRSERERELRHKFEALKMERINKYQGVNLYVKNLDDQLTDEELREAFAPVGTITSCRIMRD-PAGNSRGFGFVCFATPEEATKAVTEMSGKLISGKPIYVALAQRKEVRRAQLEAQHAQQRATGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQARQGFVYPQQMMPRGGLPRGPIP------YRQPG--VPGGPAGYGMPQXXXXXXXXXXXXXXXXXXGPPQMAGPPGQANPNANRNRNNFKYTANARNQPPV-----------------------------------QEPVPQQPGGIPQM-EPLTSAALAAASPGMQKNMIGERLFPLIHRSQPELAGKITGMLLEMDNGELLHLLESPDALDAKIAEALAVLEAHQSEE 672
[Close]
BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: A0A067BXY4_SAPPC (Polyadenylate-binding protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BXY4_SAPPC)

HSP 1 Score: 595 bits (1533), Expect = 6.600e-198
Identity = 401/658 (60.94%), Postives = 453/658 (68.84%), Query Frame = 1 
Query:  445 PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDE-NGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTT-TLYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFAQR--TGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRGPRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHPNAAPATN-----ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQA 2379
            P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNV+DAERALDTMN+T+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D  +G SKGYGYVHYET  +AN AIAKINGMLIAG +V VGHF +R +R   ADWTN YVK +P +WDD+ LR+EFE  G ITSC V     +DA  +GN    RGFGFVNF+E ESA KA+EA N   V   +G    LY  +AQK+SER+REL++K E +KMER+NK+QGVN+YVKNLD+ + DD +REAF+  GTITS R+M D  SG S+GFGFVCF+ PEEATKA+T+MNGK++  KPIYVALAQR+EVRR QLEAQ AQ+  +GM   RG+PM    MY       AQP  MP Q RQ  V    MMPRG                                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    AN R  P  APA       E LT+AALAAA P  QKNMIGERL+PLI   QP LAGKITGMLLEMDNGELLHLLESPEAL+ KI EA+ VL  H A
Sbjct:   27 PFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDTMNYTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDVSIDNKALYDTFSLFGNILSCKVAIDNTSGGSKGYGYVHYETAEAANEAIAKINGMLIAGSEVFVGHFQKRQDRPDLADWTNCYVKNIPHNWDDATLRKEFEVFGSITSCVVM----KDASSEGN----RGFGFVNFDEPESAQKAVEALNDKVVGQEDGADIALYVGKAQKRSERERELRNKFEALKMERINKYQGVNLYVKNLDDQLNDDELREAFTTCGTITSCRIMKD-PSGNSRGFGFVCFATPEEATKAVTDMNGKLVSGKPIYVALAQRKEVRRAQLEAQHAQQRASGMVVGRGMPMQQPPMYGAAPMFYAQPNQMPPQSRQGFVYPQQMMPRG---------------------------------------------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVPPQMQGQPRNNRNNFKYTANARNQPEVAPAAPAVPVMEPLTSAALAAASPNMQKNMIGERLFPLIEKSQPSLAGKITGMLLEMDNGELLHLLESPEALEGKITEAIAVLEAHMA 618
[Close]
BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Match: K3X8Z0_GLOUD (Polyadenylate-binding protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3X8Z0_GLOUD)

HSP 1 Score: 585 bits (1507), Expect = 6.910e-194
Identity = 412/689 (59.80%), Postives = 465/689 (67.49%), Query Frame = 1 
Query:  379 SVAPAMSQGPTQGQQGQGNAIA-PYHSASLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVATDEN-GESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGNEGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTT-LYCARAQKKSERQRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITSARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRTQLEAQFA-QRTGMPP-RGLPMAGQGMYSMPYWMGAQPG-MPQQPRQYMV--PHMMPRGPRGPMPAYGRGNYPMPAYATPGQASSRPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANFRLHP--NAAPATN------------ESLTAAALAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLESPEALQAKINEALQVLSEHQA 2379
            S +P  S   T      G A A P+H+ASLYVGD+  DV EA LFEIF+ VGPVASIRVCRD VTRRSLGYAYVNFHNVADAERALDTMNFT+IK   CRIMWSQRDPSLR+SGVGNIFVKNLD ++DNKALYDTFSLFGNILSCKVA D   G SKGYGYVHYET  +A+ AIAKINGMLIAG +V VGHF +R +R    DWTN YVK +P+ W D  L +EF+  GP+ S  +      DA  + N    RGFGFVNFEE E A KA+EA NG      +G+   LY  +AQK+SER+REL++K EQ+KMER+NK+QGVN+YVKNLD+ + DD +REAF+  GTITS+RVM D  +G S+GFGFVCFS PEEA KA+ EMNGK++  KP+YVALAQR+EVRR QLEAQ A QR G+   RGLPM    MY        QP  MP Q RQ  V    M+PRG                                                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              AN R  P    APA              E LT+AALAAA P+ QKNMIGERLYPLIH  QP+LAGKITGMLLEMDNGELLHLLESPEAL+AKI EA+QVL  HQ+
Sbjct:    5 STSPTNSPATTAASSATGAAAAQPFHTASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDNTTGASKGYGYVHYETAEAAHEAIAKINGMLIAGTEVFVGHFQKRQDRPDIDDWTNCYVKNIPSQWSDEDLLKEFKPFGPVLSAVIM----RDADAELN----RGFGFVNFEESEGAHKAVEALNGKVYQTADGSDLELYVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDDQLNDDELREAFASAGTITSSRVMRDQ-NGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKPVYVALAQRKEVRRAQLEAQHAHQRAGLVVGRGLPMGQPPMYGAAPMFYTQPNQMPPQARQGFVYPQQMLPRG------------------------------------------------------VHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGPGAVNRRNFKYTANVRNQPPREGAPAPGAPPAAPVQVGGPEPLTSAALAAASPDVQKNMIGERLYPLIHRQQPELAGKITGMLLEMDNGELLHLLESPEALEAKIQEAIQVLEAHQS 630
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig887.4.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTD5_ECTSI0.000e+079.71Polyadenylate-binding protein n=2 Tax=Ectocarpus T... [more]
A0A835YVH9_9STRA1.310e-22761.48Polyadenylate-binding protein n=1 Tax=Tribonema mi... [more]
A0A6A3LR95_9STRA7.900e-20360.69Polyadenylate-binding protein n=5 Tax=Phytophthora... [more]
A0A2D4BDJ5_PYTIN2.930e-20153.27Polyadenylate-binding protein n=2 Tax=Pythium TaxI... [more]
M4B4S0_HYAAE2.750e-20059.04Polyadenylate-binding protein n=19 Tax=Peronospora... [more]
W4FQT6_9STRA1.080e-19953.07Polyadenylate-binding protein n=8 Tax=Aphanomyces ... [more]
A0A7S2V0G2_9STRA2.750e-19957.29Polyadenylate-binding protein n=2 Tax=Fibrocapsa j... [more]
A0A6G0WN78_9STRA3.310e-19856.39Polyadenylate-binding protein n=2 Tax=Aphanomyces ... [more]
A0A067BXY4_SAPPC6.600e-19860.94Polyadenylate-binding protein n=4 Tax=Saprolegniac... [more]
K3X8Z0_GLOUD6.910e-19459.80Polyadenylate-binding protein n=2 Tax=Pythiaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig887contigA-nodosum_M_contig887:105522..117168 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTD5
Preferred namePAB1
PFAMsPABP,RRM_1
Model size3275
Max annot lvl2759|Eukaryota
KEGG koko:K13126
KEGG Pathwayko03013,ko03015,ko03018,map03013,map03015,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003727,GO:0003729,GO:0004857,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005737,GO:0005840,GO:0006403,GO:0006405,GO:0006406,GO:0006417,GO:0006446,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008428,GO:0009889,GO:0009894,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010608,GO:0015031,GO:0015833,GO:0015931,GO:0019219,GO:0019222,GO:0030234,GO:0031323,GO:0031326,GO:0031329,GO:0031503,GO:0032268,GO:0032991,GO:0033036,GO:0034248,GO:0034613,GO:0035770,GO:0036464,GO:0042886,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044092,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0050657,GO:0050658,GO:0050789,GO:0050790,GO:0050794,GO:0051028,GO:0051168,GO:0051169,GO:0051171,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051252,GO:0051641,GO:0051649,GO:0060211,GO:0060255,GO:0061013,GO:0065007,GO:0065009,GO:0070717,GO:0070727,GO:0071014,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0097159,GO:0098772,GO:1900151,GO:1901363,GO:1903311,GO:1990841,GO:1990904,GO:2000112
Exons12
Evalue0.0
EggNOG OGsKOG0123@1|root,KOG0123@2759|Eukaryota
DescriptionRNA binding
Cds size2025
COG categoryJ
BRITEko00000,ko00001,ko03019,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870300.9771957-UTR-A-nodosum_M_contig887:105521..1058901680870300.9771957-UTR-A-nodosum_M_contig887:105521..105890Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig887 105522..105890 +
1680870301.131926-UTR-A-nodosum_M_contig887:116287..1171681680870301.131926-UTR-A-nodosum_M_contig887:116287..117168Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig887 116288..117168 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870301.0013428-CDS-A-nodosum_M_contig887:105890..1059591680870301.0013428-CDS-A-nodosum_M_contig887:105890..105959Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 105891..105959 +
1680870301.019412-CDS-A-nodosum_M_contig887:106383..1064701680870301.019412-CDS-A-nodosum_M_contig887:106383..106470Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 106384..106470 +
1680870301.0301762-CDS-A-nodosum_M_contig887:107216..1073101680870301.0301762-CDS-A-nodosum_M_contig887:107216..107310Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 107217..107310 +
1680870301.0398571-CDS-A-nodosum_M_contig887:108287..1084331680870301.0398571-CDS-A-nodosum_M_contig887:108287..108433Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 108288..108433 +
1680870301.0501974-CDS-A-nodosum_M_contig887:109139..1093041680870301.0501974-CDS-A-nodosum_M_contig887:109139..109304Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 109140..109304 +
1680870301.061221-CDS-A-nodosum_M_contig887:112045..1121851680870301.061221-CDS-A-nodosum_M_contig887:112045..112185Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 112046..112185 +
1680870301.0728018-CDS-A-nodosum_M_contig887:112528..1126611680870301.0728018-CDS-A-nodosum_M_contig887:112528..112661Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 112529..112661 +
1680870301.0820544-CDS-A-nodosum_M_contig887:113558..1141851680870301.0820544-CDS-A-nodosum_M_contig887:113558..114185Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 113559..114185 +
1680870301.0929031-CDS-A-nodosum_M_contig887:114450..1145671680870301.0929031-CDS-A-nodosum_M_contig887:114450..114567Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 114451..114567 +
1680870301.1022089-CDS-A-nodosum_M_contig887:114868..1150511680870301.1022089-CDS-A-nodosum_M_contig887:114868..115051Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 114869..115051 +
1680870301.1114414-CDS-A-nodosum_M_contig887:115651..1157901680870301.1114414-CDS-A-nodosum_M_contig887:115651..115790Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 115652..115790 +
1680870301.1207461-CDS-A-nodosum_M_contig887:116162..1162871680870301.1207461-CDS-A-nodosum_M_contig887:116162..116287Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig887 116163..116287 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig887.4.4prot_A-nodosum_M_contig887.4.4Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig887 105891..116287 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig887.4.4

>prot_A-nodosum_M_contig887.4.4 ID=prot_A-nodosum_M_contig887.4.4|Name=mRNA_A-nodosum_M_contig887.4.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=675bp
MALSVAPAMSQGPTQGQQGQGNAIAPYHSASLYVGDLSKDVAEATLFEIF
SQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDTMNFTTIKDQA
CRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFGNILSCKVA
TDENGESKGYGYVHYETGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRA
GQADWTNLYVKGLPASWDDSKLREEFEKHGPITSCKVQVHEGEDAKEKGN
EGKSRGFGFVNFEEHESAVKAIEAFNGTEVPDGEGTTTLYCARAQKKSER
QRELQSKHEQVKMERMNKFQGVNVYVKNLDEGVTDDTMREAFSPYGTITS
ARVMVDNTSGQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQR
REVRRTQLEAQFAQRTGMPPRGLPMAGQGMYSMPYWMGAQPGMPQQPRQY
MVPHMMPRGPRGPMPAYGRGNYPMPAYATPGQASSRPMPGQPQQRRPAGP
RQPRGQPPPQAGRGVPHGRGMPQQPQGQGGPGRGNFKYTPAVRNQQQPAG
PNMQPQPQQPPQQQGPSGPQQPMPVPGPQANFRLHPNAAPATNESLTAAA
LAAAPPEKQKNMIGERLYPLIHDGQPQLAGKITGMLLEMDNGELLHLLES
PEALQAKINEALQVLSEHQAQDGR*
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mRNA from alignment at A-nodosum_M_contig887:105522..117168+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig887.4.4 ID=mRNA_A-nodosum_M_contig887.4.4|Name=mRNA_A-nodosum_M_contig887.4.4|organism=Ascophyllum nodosum dioecious|type=mRNA|length=11647bp|location=Sequence derived from alignment at A-nodosum_M_contig887:105522..117168+ (Ascophyllum nodosum dioecious)
CAGCTCAAAGGCGAAATAATCACAACGTTGACGTTCGGGTGTTTGAGCGT
CGATCCGTGGCTTCCGGTTGCGCCATTTTCTGGATGTATCTCGGGTGCTG
TTCGGGCGAGCACCGTGTGGTTGCGCTAGATGGCACTGGCTGTTGGAAAC
TTGATGCATAACCCAGCTGTCTACTGCTGAATTCCTCACGAATTATTTCG
CAGGCCAAGGCACGTTGCAATCCCACCACTCCGCTACCCCGCTGTCGCCG
TTTGCCGATGTGCCTCCACTCGTTGGCAGCCCAGAGCAGCTCCGCAACCC
ACACAACATAGCCCTCCTGCCCGTGTGGCATCCTCGATCCCTGATCCGGT
CATCCTTTTGGAATAGAGTATGGCTTTGAGCGTCGCTCCGGCTATGTCCC
AGGGCCCCACTCAGGGGCAGCAGGGGCAGGGCAATGCGGTGAGTGGTTCT
CAGGCCAGCATGCCGGCCCCACGTCGTAACCGCTCGCCGAGTCGGCTTTA
ATGCTTACCAGCTCGCACTCCTACTTACACCTAGTTTGCTACCGTCTTGA
CTATCTACAGACGGTGTCTAAGCCACTAAGCACCGGCCTTACCCGTCTCT
CTATCCGGCCTAGAGCATGGTCAGACGAACTCGGATCACTTGCGTGGTAC
TGTGTATTCGGTTCGTTCGGAACTTGAATCCTCACGGCCACGACTTCATA
AACATATCAGCTCAGTGCATCACCCCTGGTTCCCTAACCCCGCAGCTGTT
TTTTTGCCATTTTGACCCAGAGCCTCGGGCACCCAACTCAGGAGCATGTC
ACTGTTAACATTTCTCACTTCGTCTGTTGTTCTGTTGGGCGGGTACCCTT
GTTTGATCGCAGATTGCCCCGTACCACTCTGCCTCGCTTTACGTGGGCGA
CCTCTCTAAGGACGTGGCGGAGGCCACACTTTTCGAAATCTTCAGCCAGG
TGAGTAGCTTCTTAATTTTTTAGGAACGCTTTAACACTGATTTTTCTTTA
AACAGACCTTGACACTAGTAGTATCTCCTTTCCCTTGTACAGTACCAGTA
TATAGTGTTGACCGCGAGTACCGAGAATCGGACTGTGTCAACGCCGAGCA
GACTGCCGGCTGTCCTGCGAGATGTTAACCTCCCTCTCTTTGACGCGCTC
GCGATGATAGATTTATCGGCAAGATTCGTTTTGGTGTTGAGTCCTTGTAA
TGCTATAAAGCTATGCTGGGGCATTCTCCACATAAAAAATTTTGGAAGTT
TCTTCCCCCGGTTCTCCCTATTCTCATACTCCGAAGTACTATTATATCAT
CTGTAGAATATATTTGTAAGTGAAAATTATCCCTTGCTCAAAATCCAACC
TCAGGAACACGAGTTTTCTCTACTGATGACTGAGGAGCACCCGCTGGAAT
TTTCGTACCCAGACAAACAGAGGATTGCTCTCGTATGTCGACCAAAGTAA
ATGCCCGAACACTGATGGAAAACAACTCCCGAGCTATTGATCCCACCTAA
ACGTTTTGACATTTTTCCCCCCTGACTGGGGGATGCTCAGAAGGTCTAGG
TGCATTCAGATTTTTCTTTAAACTCCCGAGATAAAACCCCATGGGAAGGC
CTATTCAAACGACATATTCGAAAAATATATGCCCTTGACACAGCCTACTA
CTACTGTCTGTTGTACCATCCCATCTTCCGGGCATGAGGTGGCAGGTTGG
ACCGGTAGCTTCCATCCGCGTGTGCCGCGATACTGTCACCAGGCGTTCGC
TGGGATATGCCTACGTCAACTTCCACAATGTGGCAGACGGTAAGCTTTGC
ACTGTCTGTAATAATCTGGTCACTACTGTACCGTACCGTTCATACATATA
TACATACTTCGTACATAGCTTGCCTCTGAACAGCGTGTGACGAAGCTGTC
GAAGGAAATACTTTTGACAATTCGTACAAGTAAGGCTCTTGTAAATAAAT
GGCCGCCGCCGCAGAACTCGGGAGGAATCCCGTAAGTCCGCACCAGATTC
AGCCTGAGTATGGAGATGAGCAGGCTGACGTGGGACGGGACTGCCAAACC
CGTTTCGCGAGATCAAATACTCAGGCGCGAACGGGGACAGGGAAAAGTTC
ATTTTCCCTGTGCAGCTGACCACGAGCAGGATTGGCAACCTTCCCTGGTT
GACCCTTGCCCTTGATAGATGTGATGACCATACATGCATAAATGTTCGGC
CTCAGCCTTTTGATGATGCTTTCTCAATCCAATCATGTTCAAAATGCCAA
TACGACTGCTATCGCCTGTATACCGCATTTTGTTATTTCTACACTCCCAA
ATCACCTGCCCTCGAAATCAAATACAAACAGTACAGTATCAAGAAAGAGC
CAGGAATTGTAAACATAATTTTACATTTAGTATCCACAGGGGTACCTGTA
ATTCGTTTGGGGAAAGGAAACGAGTCCTCGCTTGCGGACCATTCCAGACA
GTAAAGTAGGGGTGTAGAAACAAGCGACGGAACGAAACGTTTGCCTGTAG
TTCTGAAGGAAATGCCAACACCCAGCGTCAAACTTTCATCTAATGGTAGA
AATAATGTATCTGGCCCGGACAACCTCCCGGTAAACTGTTGCCAGTTTTG
TGGATCCGACGGCTTTGACGGGCGGCTGGTTCCATTCATTCCCGCCCTGT
TTTGACATTTGATATACTTTTGTAAATACAGTAGTACTGTACCGTACTGC
TGTAGTCAACACTGTTCCCTTGTATTTTTGTCGTCTCGTCTCTCGTGTTA
CTTTTTACTTGTACAGCTGAACGCGCCCTTGATACGATGAACTTCACAAC
CATCAAGGACCAGGCTTGCCGCATCATGTGGTCCCAGCGTGACCCTTCCC
TTCGCCGGTCGGGCGTGGGCAACATTTTCGTGAAGAACCTCGACGAGACG
GTCGACAACAAGGTGAAAGCGAGCCCTCGTACAGTAAATTGTGTAGTACC
TGTTATTACATATGGTAGGAGGCAGCACGTGTGTCTCGTGGTGAAAGGGT
CGGCGCAGTCACGCCATCATCCAAAATATTTACAAAGCACACCTGCTAGT
GCGGAAGTCGAGAGTTCGATTCTTACCAAAGTAGGATTCGTGTTCTTTCT
TTCGTGACGGAAAACGTGGGAACGGGAGTATGTAAAATTTAACCATTGGT
TGACGAGTTGAGTTGTAAGAGTGCTGAACTTACATCGCGATAAAAAATCG
TAAGGCGTGAACCGGGGAGAGATGGGAAGATTCAGATTCTTCGTGATAGT
GGTAATGACCACAGGCAGAATGGAAATGATGTCTATCGGCTATAAGTGAG
TTAGCCTGAGGGCGGGCTCAAATCAAGATACAGTATACTAGGTTACCTAC
TAGACCACTCGGGCGACGAGCTTATACCCTATGATAGGAGAACATTAATT
CACGATCCGATTCCCGCAATGGACCACCCGAGATTTTGCACATCTTCCCT
CTTGTACCTCCGGCGACCCGAATAAACAATAAACTTTGCATGGACTGTAT
TTTCTCCCCCCGTAGATGTCTGCTCCTTTTACTCTTTCAACTGTATTATA
CTTTTTTTTAACTGTGTTGTACCTCTTTCCGGTCACAATTCCACGTCATG
CACCGCACGCAACCCCAGGCTCTGTACGACACGTTTTCCCTGTTCGGGAA
CATTTTGTCGTGCAAAGTGGCAACAGACGAAAACGGCGAAAGCAAGGGAT
ATGGTTATGTTCACTACGAAACGGGCGTGTCGGCTAACATGGCCATCGCG
AAGATTAACGGCATGCTCATTGCCGGGAAGCAGGTGCAGTCACGGTCATT
GCGCAGGAAGCTGGCGCAGGCATTGATGAAGTGACTTTGGTTTTGTCTTT
AAAAAATATATAAACTTTTTAATTTTAGGCACGTAATCCTGAAGAAAGGC
GCCAGCAAATCAAAATTGCTGCTCCACAAAACGCCAATATGTTGCGAAGG
AGCGATGGTCTCGCGTGTTGGCACAGCAGTATCGAATATATAAAACATGT
ATGTATGGTCATCACATATAGCAAGGGTAAGGATCAATCCGGTAAGGTTG
CCAATCCTGCTTATGGTCAGCTGAACAGGGAAAAGGTCCCCCATTCGCGC
CTAAGAATTTTGTCTCGCGAGATGGGTTCGGCAGTTATGTCTCGCGTTAG
GCTGCCCATCTCCATGAATCTGTTGCTTACTAACGGGATTCCTCCCGATT
TCCGCGGCGGTGTCCATTTATTTGTTTAAACCGCCATACGCCATCGGGTC
AGTCCCGAGTTTATCGGGTCACGCAATTGTGGACCGATGGCGTTCACTGC
CGAGAGTTCGCCGGTACGGGGCCAGTTCCGAACGGGTGCTGCCCGGGCAG
GTCACCATGGACCAATTAATATTCGCCTCCCCTCTCTTTCCCACACCCAG
TATACTATTATTGGTATGAAATGGGCATGGTGAAAGGACCGGCGGGTGTA
GCTCTACGATGGTCCATCACTTAATTTTTGACTGTTTTTGTCCCAAAAGA
AATACGAATGAGATTACAGATTACTTATGATTACCATTCCCATCAGAAAT
ATAAAAAGAGAGAGAGGGCTTCGCAAGCAAAATACAGTATTTGCAAATAT
CTTGTACAGTCAATGTTAAAAACACCAGGCAAATAGATGTTGACGCGTTC
AGAGTTGAAGAAAAGCATCATCTTTAAACATGTTGAGTCGTGTAATTTGA
ACGGTCAATTCCAATGATGTCCAGACATTTTGGCGATATCATAAACATGG
TACTCCGAAACCTCTTGAGTCGTATAACGGATCAGAAAGTTTGAGGATGT
ATGCATGTGTGTGTGTGTGTGTGTTTTCTTCCCATTAATTCTGGACATCA
AGTTCGTTGGACGTACCAGCCAGGATTTTTCATCCACCTTCCTTCTGCGG
TGCGTGCCTTAATGTTTCTCGCGAAAGGGATTCACCATTCCTTTCCCTCG
TCGACCGTGAAGTCGAATTTTGTGTATCAACAATTTAATCGTTCTCCACT
CGTTGGGCATTTTATTTTTATTTTATTTTATTTTAGTCAGAAAAATCCCG
TTTACCGGGATCGAACCCACATCCCAACGTGTCAGAAGGTTACGAGGTTA
CCTCTGAGCTACCGGGGCGACCGGCTTTGCTCGTGGTCAGCTGGTTTAAA
ATGTAAATATATAAAACAAAAATTTAAATGTCCCCGTTCGCGCCTGAGAG
TGGTGTCTCGCGAGAGGAGACAGGTTATGTTAGTCCGTCTCTCCCGCGTC
AGCCAACTCATTTTACACGCTCGGCCTTAATGCAATGCTTACCCACGGGA
TTCCTCTCGCTTTCCCCGAAGGCGGTCCGTAAATACCGTCAACCGCCATC
GGGTCAGTCCCGAGTTGATCGGGTAACGCAATTGCTTACCAGTGGCGTTC
CGCAACGGCGTCCATATATACCGCCAACCGCGTTCACCGCTGAGAGTCCG
ACGGCACAAGGCCAATATTTCTCAAGGCAGTTCCAGTAACGGTCTGCTTT
TTCAGTTTGTACCGTGGCCCAATTTTTATGCGTCTCTCTTTTCCCAAACC
CACTTATGAAATAAAGTATGTATGTATGTATGGTAATGTCATCACACGTA
GCAGAGTAAAGATCAAGCGGGTTAGGTTGCTAATCCTGCTCGTGGTCAGC
TAAACAGGGAAAATAACATTTCCCTGTCCCCGTTCGCGCCTGAGAATGTG
GTCTCGCGAGACAAGTTCGGCCGTCCTGTCCCCGCGTCAGTCTGCTCATC
TCCATAGTCAGGCTGAATCTGGTGCTTAGTCAAGGGACTCCTTCCGATTC
CGCGATGGCGTCCATATGTACCGTAAACCACAATCGGGTCAGTCTTGAAT
TTATCGGGTCACAGCGCACCGATGGGGTTCACTGCCGAGAGTCCGCCGGC
ACAGGGCCAGAAGTCCTCAGGGTAATTCCAGTAAGAGGTGTAATGGTTGA
TGTGGCCTTGACAGGTATTAGTATATGACATCACTATGGACCATTTTTAT
GTCTCTCTTTTCCCACACCCACTATTTTTATGTGGTTTGTATGTGTGATA
AAGAAAGTATGGATGGATGGATGGACACGTCTATAACAGCAAGTCAGGTG
TCGGATAACAAAATTTAGTATCCGGACAACTGGGCAATCATGCAATATCA
ATATCATATATAGCTCTCGCAAAGAGGGGATCACGAACATGTATGGGTTG
GACAAAAGTTGTCGATATACCCCTTAACCATTATGCATTTGGCATTATGT
CGAAGAATATCCCATAATGGCATAAGCTAATGCATATCCTTTCATATCCC
TGCCGAAATATGCCTCGATAGGCTCCGACCACCTTATGTTTGCAAAACGT
GCATGAATATCTCGTCGTATTTTCGGATCCCTTCATAGAGACTCACGATG
TACGTGGGTTTCTGGAAGCGTTAAATCTTCGCGCCAATTTGTTACCTTTC
ATGAGCCCCCCAATACGGTAAGTGTCCGTTTCACGTTTCGTCTCCGGGAA
TTGTATATTATCCCATGACTTCAGGTGCACGTGGGCCATTTCGTCCGCCG
GGACAATCGCGCCGGGCAGGCGGACTGGACCAACCTGTACGTGAAGGGGC
TGCCGGCGTCTTGGGACGACTCGAAGCTCCGTGAGGAATTTGAAAAGCAT
GGCCCGATCACTAGGTAAAGGGTGCAGAGTTTGTTGACAGCGTGTGCTCT
TGTGTGAGTGAACGATTTTTCCTGGGGTCAGCGCGATCGAGTATTTGATA
CTGTAAGCATGTTGGTATCACGAGGAGGCCGTAAAAGATGTTGACTACTT
TTCTTCCGTTCGAGAGTTTTTGGAGCGACTTCCATGAGCCATGCGATCGA
AGATTCTAGTGATGAACTGCCAACGGCCCCCGCTTTCGAGTATTTTGGAT
GGATTGTACGATGTTTAGGGGAATGCTGCTCACCTCACACGTCTGTTTGT
GTCTTTGGTCCTCCGTCATTTCTGGGGGGCGATGTATCTATATCTGTTAC
TGAATAGCTGCAAGGTACAGGTGCACGAAGGTGAAGATGCAAAGGAGAAG
GGCAACGAGGGTAAAAGTCGCGGCTTTGGCTTCGTGAACTTCGAAGAGCA
TGAGTCCGCGGTCAAGGCCATCGAGGCCTTCAACGGCACCGTGAGTTCGT
CGGGGGTTTATTGCGTTTGCGTCCTTGTGATGCTGAGCATTGTTTTCTCT
GCAAAATATAGATTGAAAATCCTTGAAGGTATAATGGTGTTCTTGGCCAA
GGCTCTCGCCCAAGCGTGGGTCTGCCGCCTAGCGTGTTTTGTTAACGTGC
ACGATATCTAATGACGTGTCAGTGTTTGCCGTATTTGTGCCGAAAATCCG
CCGATTCGGTGTTGCTTGTTTTTTTTGTTGTGACGAAGTTATATAATGAT
GTTAGAATAGCGTTTCGCTGTCTCACGACGCATCCAACCGGTCCCCATTG
GAGGCGGGCCGCCATCTGACCCCAGGGCTCGCCCCCAAGTGTGACACGGA
AGAGTAAACATCGCTGAAATTCATGGCCAGGGCCTTTACAACGCATCACT
TATTCTGGTAGTGCCCTCTTACACCGGCGAAACATGCAATCAGTCCTAAA
AACCTGGGAGCAAAAAAACACCGAAACCTCGGTGGATGTACGTTCTTTTC
CTTCTTGATGGTATTGAAACTGAAAAAAAATATCCATGGGCAGCGTCGTT
GAGACAACTTCTGTCAGTTGCACAAACAAAATTCATCAATGATCATCAAC
AAACTTAGATCGGGAATAAGATTTCTAACAAGCTCTTTATTCAGATTACC
GTACGTATTTCCGTGCTCTGGCGTTCCAAAATGCCGAACGGCGGTCTCTC
GAACTGGGTGCATTTCTTAACCAATGGCGCACAGGCGATACCTCTCTAAA
AACCAGTTTTTTGTTTGCGAGCTTCAGGTGTCCTGTTTTTAGGTTTTCCC
GCTTTGTTCACATACTGCCTGCACAAGATTCTACTATTATAATATTAATA
CCTCACTTCCCGTGGCCCTCGCGGGCGACAACCTCAGGAAGTGCCGGACG
GCGAAGGCACCACGACGCTGTATTGCGCGCGCGCCCAGAAGAAGAGTGAG
CGTCAGCGCGAGCTGCAGTCAAAGCACGAGCAAGTGAAGATGGAGCGCAT
GAACAAGTTCCAAGGGGTTAACGTATACGTGAAGAACCTGGACGAGGGCG
TGACGGATGACACAATGCGCGAGGCGTTCTCCCCTTACGGCACCATCACC
AGCGCTCGCGTGATGGTGGACAACACCTCCGGCCAGAGCAAGGGTTTCGG
GTTCGTGTGTTTCTCTGCCCCCGAGGAGGCGACGAAGGCCATAACGGAGA
TGAACGGGAAGATGCTTCTGAACAAGCCTATCTATGTTGCCCTAGCCCAG
CGCCGGGAGGTGCGCCGCACCCAGCTGGAGGCGCAGTTCGCCCAACGCAC
AGGCATGCCTCCTCGCGGCCTGCCCATGGCCGGCCAGGGCATGTACAGCA
TGCCGTATTGGATGGGCGCGCAACCCGGTATGCCGCAGCAGCCCAGGCAA
TACATGGTGCCGCACATGATGCCTAGGGGGCCTCGTGGGCCCATGCCTGC
GTACGGACGCGGAAACTACCCGATGCCTGCGTACGCCACTCCCGGACAGG
CAAGCTCAAGGCCTGTTCCATTTTTTTTCTTTCGGTGTGGTATAGCGGTT
GGAGGAGTTGCAATCTTGCGATGCTGTCTAAAGTTATCACTCCGCGCGAT
CCTCTTGCTTTTTCATTTTTGACTAAAGGTTGAACTTTGGCGTTTCCATG
CGCATCTTTTAGCCTAGACGTACAATGTACGGAAAATGATAACCTCGCGC
TTAAAGCGTGCCCACTGAAGATTCGTTATCAAATTTGTCTCGTCGTTCGC
GCGCGCTCTTATTTTGCCCTTGGTACCAGATGCCCGGCCAGCCCCAGCAG
CGCCGCCCTGCCGGCCCTCGCCAGCCGCGCGGCCAGCCCCCCCCCCAGGC
TGGGCGTGGTGTGCCTCACGGCAGGGGTATGCCCCAGCAGCCTCAGGTCA
GCATTAGTAGACTCGTCGTAGCCGTATGTATACGTCGGTGTTCCAAACCA
CACAAATGATAAAATAGTGATTTTATTTTCTACAAACGATTCATGGCTCA
TGTATGCATACTCATGGATCAGTATTAGTAGACTCGTCGTAGCCATATAT
ATACGTCGGTGTTCCAAACCACACAAATGATAAAAGGTGATTTTGTTTTC
TACAAACGATTCATGGCTCATGTATGCGTACTCATGGAAAGTAGTCTTAA
TCGCACGTGCCCGGTGTCTCCTTGCTGCTGTCTTGTTGCTGCTGTAGGGC
CAAGGTGGTCCTGGCCGCGGAAACTTCAAGTACACTCCAGCGGTCCGCAA
CCAGCAGCAGCCCGCCGGTCCAAACATGCAGCCTCAGCCGCAGCAGCCGC
CCCAACAGCAGGGTCCCTCCGGCCCCCAGCAGCCGATGCCGGTCCCAGGC
CCTCAGGCAAATTTTCGGTTGCATCCAAATGTTCCACCCTGATTGTTGAG
TTTTGATTACCTTCTGTAAAAGGGCAATTGACTTAGCTGTTCCCCATCGC
TGAGCGTGAGCTTTTTCCTCGCGCGCGAGGTCTTTCAATCGCACTGACAG
TTTTGTCTGGATGAAGTGCCTTCGTTGCTCGTTCTTTTGACGTGCAGCAT
TCACAGTTGCCTCGGCATGTTTGTCTTTAGCATAAATTGCTAAAGCAAGT
CCTGCAGTTGAAATTGAACTTGTGCATTAAGAAGTCGAAAACAGGAGCGG
CGCTTGATTAACAAACACTGTTTTGGAAACTGAACATAGTGAAACGTATA
GAGCTATGTCTTCAAAACATGCCGGCTTGATTTATCCACGGCATCTCTGG
TTTTCGTCATCATTGGCATGGCATTTGACCAATCTTCTATTAGTAGTTTC
ACGTTTATACTATACTGTACTGTAGTCATTTGATGGTTTTGACCCTTTGC
CAACATTACTGTAGCCAGTACTGTACAGTAGAAGGAAGGTTGATGCCCCT
TAGGCGTAAACTTGTTTTCCCATGCCTTTGTTGCTCTAGACATCCGACCT
CAGCGCGCTTTGTCTGTCTTTTGTTCGCAGGCGGCGCCGGCAACCAATGA
ATCGTTGACGGCCGCAGCCCTCGCCGCGGCGCCCCCGGAAAAGCAAAAGA
ACATGATCGGGGAGCGTCTGTACCCTCTCATCCACGACGGACAGCCGCAG
CTGGCTGGCAAAATCACCGGTGATGAATCCAGATATTCATTAGTATCGTA
ACAAATATTTAATAGTTGGTTCACTCTGGCATCCGTATCAAAAGTAGGTA
GTTTTGTGTAGTCGCTCTTCACTGGTGCAAGAAATATGGGAGTTTCGTGC
CACAGATAAAAAGTACTGTCCTAACACCTATTATATAGTACGATTATACA
TTGTTCTCTTGAGTCGAATTTGTCTTCATGACGGCGTCGAGGATATTTTA
TCTCGTGAGCCGCATGCGCCACCGCGTCGGAGGAATCTGGTGACGTCTTT
GCCCGGTTTTATGCCACATGCTTTTTTCAGTCTCTCGGCATGGCCCATAA
ATACAAACGAAAAATACCGCCTTTGTTCGTTACCGCTTCAGGTATGCTTC
TGGAGATGGACAACGGCGAACTCCTCCATCTCCTTGAGTCGCCGGAGGCT
CTGCAAGCGAAGATCAACGAGGCTCTGCAGGTCCTGAGCGAGCACCAGGC
CCAGGATGGCCGCTGAGCAACCGATTCGAGGCAACAAGTCCCTTTCAGCC
AGCCTTTGATCTGCACAAGACTTCCTCCGCTTAGCAAGGGCACGGAGAGT
GGGTGCATTTCATGGCGTGGCAGACCTGTTTGCCTGTTTTCCTCGCACGT
GTGTTGTTCTCCAAGACGGACCGCCATTGCTTCGCCCACGATCTCGTTGT
CGGTGCAAAGGATGATCCTGCGAACTGCAGTCTCTTGCAAGTATAGCGTT
TGCTGCCTTTCCAGTAGCGGTAGCGATCTGTACATGCGTGTGTCGATGTT
GGCGCGAGTTGATGGTGATACCAACGCCAGTTCGAAGTATGCTACAGTTT
TTTCAAATGCTGTGTTACGTCAGTAGCTAGTGACCAAGAATCCTCGAAGT
GTGGCTCCGCTCGTAGCTGGTCTAGGGGTAGGGCTGGTGGCATTCGGCAG
GCTGTCGTTGTTGATGACGATTTGTTTGCGTGACTCTTGGCAGATGGATG
TCGGGGTTGGCGGGAAGAGAGGAGCAGTGTGGGGGGCGCCAGGCTCGACT
CTCTGGGTCATGGCGTCTTTTTTTGAATCTCAACTCTTCGCGGGGTACCA
AATCAGTGCTAATATTCTCAAAGTTAGTATTGGCTCGGAGCATAAGCGGC
ATAGTCTTTGCGGCAAAGTTACCCGTTGCCGCAACTGCTATTACGCTCAA
CCTAAGCCTTCTCTTTCACAAGACAAGACTAACCTTTCCTTTCACAAGAC
AAGACTAACCCCTAGTTCTCGAGTCCAAATCTGGGGGGTCCAAAAAGGAT
CGTTTGGTTCAAAATATCGTATTGTCCAAGTTGTTTGGAACAGGAAAACA
TAAACATTACTTACAAAGTCTACTGTACTGATTGTACACTATTAAAT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig887:105522..117168+

>mRNA_A-nodosum_M_contig887.4.4 ID=mRNA_A-nodosum_M_contig887.4.4|Name=mRNA_A-nodosum_M_contig887.4.4|organism=Ascophyllum nodosum dioecious|type=CDS|length=2025bp|location=Sequence derived from alignment at A-nodosum_M_contig887:105522..117168+ (Ascophyllum nodosum dioecious)
ATGGCTTTGAGCGTCGCTCCGGCTATGTCCCAGGGCCCCACTCAGGGGCA
GCAGGGGCAGGGCAATGCGATTGCCCCGTACCACTCTGCCTCGCTTTACG
TGGGCGACCTCTCTAAGGACGTGGCGGAGGCCACACTTTTCGAAATCTTC
AGCCAGGTTGGACCGGTAGCTTCCATCCGCGTGTGCCGCGATACTGTCAC
CAGGCGTTCGCTGGGATATGCCTACGTCAACTTCCACAATGTGGCAGACG
CTGAACGCGCCCTTGATACGATGAACTTCACAACCATCAAGGACCAGGCT
TGCCGCATCATGTGGTCCCAGCGTGACCCTTCCCTTCGCCGGTCGGGCGT
GGGCAACATTTTCGTGAAGAACCTCGACGAGACGGTCGACAACAAGGCTC
TGTACGACACGTTTTCCCTGTTCGGGAACATTTTGTCGTGCAAAGTGGCA
ACAGACGAAAACGGCGAAAGCAAGGGATATGGTTATGTTCACTACGAAAC
GGGCGTGTCGGCTAACATGGCCATCGCGAAGATTAACGGCATGCTCATTG
CCGGGAAGCAGGTGCACGTGGGCCATTTCGTCCGCCGGGACAATCGCGCC
GGGCAGGCGGACTGGACCAACCTGTACGTGAAGGGGCTGCCGGCGTCTTG
GGACGACTCGAAGCTCCGTGAGGAATTTGAAAAGCATGGCCCGATCACTA
GCTGCAAGGTACAGGTGCACGAAGGTGAAGATGCAAAGGAGAAGGGCAAC
GAGGGTAAAAGTCGCGGCTTTGGCTTCGTGAACTTCGAAGAGCATGAGTC
CGCGGTCAAGGCCATCGAGGCCTTCAACGGCACCGAAGTGCCGGACGGCG
AAGGCACCACGACGCTGTATTGCGCGCGCGCCCAGAAGAAGAGTGAGCGT
CAGCGCGAGCTGCAGTCAAAGCACGAGCAAGTGAAGATGGAGCGCATGAA
CAAGTTCCAAGGGGTTAACGTATACGTGAAGAACCTGGACGAGGGCGTGA
CGGATGACACAATGCGCGAGGCGTTCTCCCCTTACGGCACCATCACCAGC
GCTCGCGTGATGGTGGACAACACCTCCGGCCAGAGCAAGGGTTTCGGGTT
CGTGTGTTTCTCTGCCCCCGAGGAGGCGACGAAGGCCATAACGGAGATGA
ACGGGAAGATGCTTCTGAACAAGCCTATCTATGTTGCCCTAGCCCAGCGC
CGGGAGGTGCGCCGCACCCAGCTGGAGGCGCAGTTCGCCCAACGCACAGG
CATGCCTCCTCGCGGCCTGCCCATGGCCGGCCAGGGCATGTACAGCATGC
CGTATTGGATGGGCGCGCAACCCGGTATGCCGCAGCAGCCCAGGCAATAC
ATGGTGCCGCACATGATGCCTAGGGGGCCTCGTGGGCCCATGCCTGCGTA
CGGACGCGGAAACTACCCGATGCCTGCGTACGCCACTCCCGGACAGGCAA
GCTCAAGGCCTATGCCCGGCCAGCCCCAGCAGCGCCGCCCTGCCGGCCCT
CGCCAGCCGCGCGGCCAGCCCCCCCCCCAGGCTGGGCGTGGTGTGCCTCA
CGGCAGGGGTATGCCCCAGCAGCCTCAGGGCCAAGGTGGTCCTGGCCGCG
GAAACTTCAAGTACACTCCAGCGGTCCGCAACCAGCAGCAGCCCGCCGGT
CCAAACATGCAGCCTCAGCCGCAGCAGCCGCCCCAACAGCAGGGTCCCTC
CGGCCCCCAGCAGCCGATGCCGGTCCCAGGCCCTCAGGCAAATTTTCGGT
TGCATCCAAATGCGGCGCCGGCAACCAATGAATCGTTGACGGCCGCAGCC
CTCGCCGCGGCGCCCCCGGAAAAGCAAAAGAACATGATCGGGGAGCGTCT
GTACCCTCTCATCCACGACGGACAGCCGCAGCTGGCTGGCAAAATCACCG
GTATGCTTCTGGAGATGGACAACGGCGAACTCCTCCATCTCCTTGAGTCG
CCGGAGGCTCTGCAAGCGAAGATCAACGAGGCTCTGCAGGTCCTGAGCGA
GCACCAGGCCCAGGATGGCCGCTGA
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