prot_A-nodosum_M_contig8782.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8782.2.1
Unique Nameprot_A-nodosum_M_contig8782.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length64
Homology
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BLAST of mRNA_A-nodosum_M_contig8782.2.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 1.160e-9
Identity = 36/62 (58.06%), Postives = 43/62 (69.35%), Query Frame = 0 
Query:    2 AARWLALGRRFSRHKAASVIQATARGMAVRRTAGRRMADSRRRIAEAGERARQKPSLILGVK 63
            AARWL LGRRFSR KAA++IQA ARGMA R+  G  +A +R RI +A   A   PS ILG +
Sbjct: 2256 AARWLVLGRRFSRAKAATMIQAAARGMAARKKTGPGIASARARIEKANANALADPSQILGTR 2317
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BLAST of mRNA_A-nodosum_M_contig8782.2.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 4.950e-8
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 0 
Query:    2 AARWLALGRRFSRHKAASVIQATARGMAVRRTAGRRMADSRRRIAEAGERARQKPSLILGVK 63
            AARWL LGRRFSR KAA++IQA ARGMA R+     ++ +R RI  A   A   PS +LG +
Sbjct: 2137 AARWLVLGRRFSRTKAATMIQAAARGMAARKKTDPGISSARARIERANANALADPSQVLGTR 2198
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8782.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LLN9_ECTSI1.160e-958.06Similar to asp (Abnormal spindle)-like, microcepha... [more]
A0A6H5KRH5_9PHAE4.950e-853.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 14..43
score: 8.4802

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8782contigA-nodosum_M_contig8782:11556..13121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8782.2.1mRNA_A-nodosum_M_contig8782.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8782 11556..13121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8782.2.1 ID=prot_A-nodosum_M_contig8782.2.1|Name=mRNA_A-nodosum_M_contig8782.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=64bp
VAARWLALGRRFSRHKAASVIQATARGMAVRRTAGRRMADSRRRIAEAGE
RARQKPSLILGVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS