prot_A-nodosum_M_contig874.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig874.6.1
Unique Nameprot_A-nodosum_M_contig874.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length623
Homology
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: D8LGX6_ECTSI (PseudoU_synth_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX6_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 2.090e-139
Identity = 255/532 (47.93%), Postives = 309/532 (58.08%), Query Frame = 0
Query:   92 AAETTYVNDRRIVHISTRYAQ---LRSEQQQRSGSSELPPTISDIIARQAAVSVRRAAELVRFGAVYIGEETVNGGGKTRTPGKGKTKRHPGGEGEEPVSVVKGTAISEAQRRKINSKSAGEPPFVGTSFAHMRLRRLDGSEALSPPPPNAYLRVHCDPRTFPAARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRLGLTTHCCRSRAFDGRSRPRLYANYDTELLEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATEISGARVVAASLEAELAVG-------------LEAARARSGDGAAAGGVPAPYGRNALGMTDSGVALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIGDTRYRGVVGRVHRGVPADDRMDIFGPEPDSIALQAARLEFEWEGERIVYSAKRPPWA 607
            +AETTY  + R+VHI+T  A    L  E+Q      E   TI+++++   AVS  R  ELV+FG+VYIGE                  RHP        S  K   I+ A+++ +  KSA + PF GTSF HMRLRRL   E+ + PP  AYLRVHCDPRTFPA++  DW +R+V   ED++VVDKP GVP+VPTIDN V+N + QA LA+A      RS             LPPP LHAVSRLDVCTSG+++FAR+  +A  LN LFR R + KRYLALL PGPAV  G   HCCRS+AFDG  RPR+YA++D ELL G KWGGAW EARST+LLCAP TG A                                                +EAA AR G+G                  D   A DAE      A  ++  H PHLC MEL TGRTHQLRLQLAAMG+AI+GDTRYRGVVGRVHRG+  DD    FG EP++IALQAAR+EFEW+G  +V+S  RP WA
Sbjct:   27 SAETTYQGEHRVVHIATPGAPPPWLEDEEQ----GEEQRATIAELVSHFGAVSRERGVELVKFGSVYIGEVVDT------------NWRHP-------PSKEKQMTIAAARKKAL--KSADQAPFRGTSFEHMRLRRLHPWESGNFPPHGAYLRVHCDPRTFPASQVMDWSKRIVHKNEDFVVVDKPAGVPTVPTIDNGVQNCVFQASLAVAGMPPGSRS-------------LPPP-LHAVSRLDVCTSGIVVFARHKEAAKQLNELFRARRVKKRYLALLTPGPAVPTGSMAHCCRSKAFDGSRRPRIYADFDEELLAGDKWGGAWQEARSTVLLCAPATGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEIEAA-ARGGEGREE--------------EDGSTAPDAEATTAAEAAREEGDHAPHLCAMELETGRTHQLRLQLAAMGSAIVGDTRYRGVVGRVHRGLRVDDDTSRFGQEPEAIALQAARIEFEWQGRTVVFSTDRPSWA 504          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: A0A835YKX4_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX4_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.500e-55
Identity = 140/387 (36.18%), Postives = 182/387 (47.03%), Query Frame = 0
Query:  225 RLDG-SEALSPPPPNA---YLRVHCDPRTFPAARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRLGLTTHCCRSRAFDGRSRPRLYANYDTELLEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATEISGARVVAASLEAELAVGLEAARARSGDGAAAGGVPAPYGRNALGMTDSGVALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIGDTRYRGVVGRVHRGVPADDRMDIFGPEPDSIALQAARLEFEWEGERIVYSAKRPPWA 607
            ++DG S   SP  P A   YLR+H  PR F  A A DWR R++    DY+V+DKP GVPSVPT DNA ++AL +A  AL                   D+  P   LHAVSRLDVCTSG+++FAR+  +AA L+     R + K Y  ++  G  V LG+  HCC +RA  G ++PR+YA +D     G   G  W  A               +E +  DR         SGA  ++                                                                      L TGRTHQ+RLQLAA+GA I+GD+RY  ++G+VH G  A DR D FGPEP+ I L AA LEF+W GER+ Y+A+ PPWA
Sbjct:  133 QVDGLSRLASPDAPIARGTYLRLHAAPRRFARAAAADWRARVLHACADYVVIDKPAGVPSVPTTDNAADSALWRARAALG-----------------GDAARP---LHAVSRLDVCTSGVLVFARSPAAAAALSGAISARAVRKVY-RVVTTGAEVPLGVLRHCCSTRARTGDAQPRIYAPFDAAKACGD--GSGWRLAE--------------LEVLSHDRG--------SGASTIS----------------------------------------------------------------------LMTGRTHQIRLQLAALGAGIVGDSRYADIIGKVHDGTAASDRTDWFGPEPEEIRLHAAALEFDWGGERVCYTAE-PPWA 403          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: A0A5J4Z0G8_PORPP (RNA pseudouridine synthase 6, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0G8_PORPP)

HSP 1 Score: 166 bits (420), Expect = 1.340e-41
Identity = 146/485 (30.10%), Postives = 206/485 (42.47%), Query Frame = 0
Query:  129 TISDIIARQAAVSVRRAAELVRFGAVYIGEETVNGG--GKTRTPGKGKTKRHPGGEGEEPVSVVKGTAISEAQRRKINSKSAGEPPFVGTSFAHMRLRRLDGSEALSPPPPNAYLRVHCDPRTFPAARATDWRERLVAVTE-DYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRL-----GLTTHCCRSRAFDGRSRPRLYANYDTEL---------------LEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATEISGARVVAASLEAELAVGLEAARARSGDGAAAGGVPAPYGRNALGMTDSGVALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIGDTRYRGVVGRVHRGVPADDRMDIFGPEPDSIALQAARLEF 590
            ++  ++AR+  ++     +L+R GAVY+    ++GG  G +R+P      R       + +     +++ +AQ +K                                     Y R+H +P  +P A A  W++R+V   + D++ VDKPP +PSVPT+ N VE A  Q   AL                   + P P   LHAVSRLDVCTSG+++FAR+  +AA LN   R R + KRY  LL PGP  R      G   H  R+   D   +PR+Y   D E                LE  K GGAW  A   IL     T R      E +RAE    +E+                                                 V + A+ A +     +          +EL TGRTHQLRLQ A++G  + GD+RYR V GRVHRGVP DD +D+FGPEP+ ++L A+   F
Sbjct:   72 SVQHVLARETKLAPELVEDLIRIGAVYMAS-VISGGKRGSSRSPSTPNLSR------VQRILPADVSSMLDAQSKK-----------------------------------GMYFRLHANPARYPDAHAYVWKDRIVYNGDNDFVAVDKPPNLPSVPTLVNVVECARTQVECAL-------------------ECPAP---LHAVSRLDVCTSGVLVFARHKRAAAHLNEQIRNRSVKKRY-TLLVPGPIPREIIQKDGRVLHAARTNLPDNIPKPRIYRLLDLEKDLDAALLQDESYSTPLEAPKIGGAWHVAAMRIL-----TER------EMNRAEL---SEV-------------------------------------------------VTMQADHAGIDVRYTEYE--------VELLTGRTHQLRLQFASLGLPLFGDSRYRPVSGRVHRGVPEDDNLDMFGPEPNRVSLCASVFHF 420          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: A0A7S0H4S4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H4S4_9CRYP)

HSP 1 Score: 96.7 bits (239), Expect = 1.230e-18
Identity = 64/193 (33.16%), Postives = 88/193 (45.60%), Query Frame = 0
Query:  237 PNAYLRVHCDPRTFPAARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRLGLTTHC-CRSRAFDGRSRPRLYANYDTELLEGGKWGGAWIEARSTILLCAP 428
            P +Y+RVH  P+ F      DW  R++  +ED++V++KPPGVPS+ TIDNA+E  + Q                           +   SL   SRLDVCT+G++IFA+      + N+   ER   K Y  LL+ G  V+ G   H  CR R     SRP L   +             W +A   IL C P
Sbjct:   89 PGSYVRVHAQPKRFLTVYKMDWNARVICESEDFIVINKPPGVPSLTTIDNAIECVMSQV------------------------EKIKNISLMPTSRLDVCTAGVLIFAKTREFCMSTNKAMSERRSEKIY-KLLSEGE-VQTGTVRHLFCRKRKGHKNSRPTLLRAWQDLTSRKDLQEEGWQDAVLEILDCRP 255          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: L1JPX0_GUITC (PseudoU_synth_2 domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPX0_GUITC)

HSP 1 Score: 97.1 bits (240), Expect = 1.570e-18
Identity = 97/353 (27.48%), Postives = 131/353 (37.11%), Query Frame = 0
Query:  237 PNAYLRVHCDPRTFPAARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRLGLTTHCCRSRAFDGRSRPRLYANYDTELLEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATEISGARVVAASLEAELAVGLEAARARSGDGAAAGGVPAPYGRNALGMTDSGVALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIGDTRYRGVVGRVHRGVP--ADDRMDIFGPEPDSIALQAAR 587
            P +Y+RVH  P+   +    DW  R++  ++D++V+DKPPGVPS+ TIDN VE  + Q                           +   SL   SRLDVCT+G++IFA+        N+   ER   K YL L            +     R  D RSR         +L E G     W +A   IL C                            R +   L+                         P+             L  +G          R          L TGRTHQ+RLQ AA+GA ++GDTRY    G + + V     D   +FGP+PD I LQA R
Sbjct:   60 PGSYVRVHAQPKRCLSVYKIDWSARVIRESQDFIVIDKPPGVPSLTTIDNGVECVMSQV------------------------EKMRNISLMPTSRLDVCTAGVLIFAKTRDFCLKTNKAMSERRCDKVYLLL------------SERELPRGEDLRSRQ--------DLQEEG-----WQDAVLEILDC----------------------------RCLLTFLQ-------------------------PFD------------LKQQGGRRKVFEYSVR----------LITGRTHQIRLQFAALGAPVLGDTRYTPAAGLLFQSVDDAIGDGSRVFGPDPDVIFLQARR 288          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: A0A812V5M1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812V5M1_9DINO)

HSP 1 Score: 100 bits (248), Expect = 4.710e-18
Identity = 100/360 (27.78%), Postives = 136/360 (37.78%), Query Frame = 0
Query:  241 LRVHCDPRTFP--AARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRL-GLTTHCCRSRAFDGRSRPRLYANYDTELLEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATEISGARVVAASLEAELAVGLEAARARSGDGAAAGGVPAPYGRNALGMTDSGVALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIGDTRYRGVVGRVHRGVPADDRM------DIFGPEPDSIALQAARLEFE 591
            LRVH +P+ +   +A   DW +RL+ V+ +Y+VVDKP GVP  P + N  E  +     AL+ AS   R  S G  G D         L A  RLDV TSGL + AR+  +AA   +L  +  ++KRYLA++  G   +  GL  H      F GR  PRL A     + +       W  AR+TIL    V                                                                          D    M+                ++L TGRTHQ+R QLA+MGA ++ D  Y  +   + RG P DD +           E   I LQ  +L FE
Sbjct:  110 LRVHTEPKRYRRCSAEGRDWADRLLYVSPEYVVVDKPAGVPCAPHVSNGREWLVPLVAAALSIASRESRGKSSG--GED---------LVACQRLDVATSGLTLLARSREAAARFRKLLCDGQVTKRYLAVVKTGVKAKTDGLLEHWLSDAVF-GRPAPRLVAPLSAPVQDSRH---KWRNARTTILSTTSVE-------------------------------------------------------------------------DGSQEML----------------LDLDTGRTHQIRAQLASMGAPVVNDGLYSHMANFLWRG-PCDDEVAENLVQSATSSEDGDIGLQCTQLSFE 364          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: A0A812T6T9_9DINO (Hypothetical protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812T6T9_9DINO)

HSP 1 Score: 97.4 bits (241), Expect = 1.140e-17
Identity = 99/360 (27.50%), Postives = 135/360 (37.50%), Query Frame = 0
Query:  241 LRVHCDPRTFP--AARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRL-GLTTHCCRSRAFDGRSRPRLYANYDTELLEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATEISGARVVAASLEAELAVGLEAARARSGDGAAAGGVPAPYGRNALGMTDSGVALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIGDTRYRGVVGRVHRGVPADDRM------DIFGPEPDSIALQAARLEFE 591
            LRVH +P+ +   +A   DW +RL+ V+ +Y+VVDKP GVP  P + N  E  +     AL+ AS   R  S G  G D         L A  RLDV TSGL + AR+  +A    +L  +  ++KRYLA++  G   +  GL  H      F GR  PRL A     + +       W  AR+TIL    V                                                                          D    M+                ++L TGRTHQ+R QLA+MGA ++ D  Y  +   + RG P DD +           E   I LQ  +L FE
Sbjct:  121 LRVHTEPKRYRRCSAEGRDWADRLLYVSPEYVVVDKPAGVPCAPHVSNGREWLVPLVAAALSIASRESRGKSSG--GED---------LVACQRLDVATSGLTLLARSREAAERFRKLLCDGQVTKRYLAVVKTGVKAKTDGLLEHWLSDAVF-GRPAPRLVAPLSAPVQDSRH---KWRNARTTILSTTSVE-------------------------------------------------------------------------DGSQEML----------------LDLDTGRTHQIRAQLASMGAPVVNDGLYSHMANFLWRG-PCDDEVAENLVQSATSSEDVDIGLQCTQLSFE 375          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: C1DZS3_MICCC (PseudoU_synth_2 domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DZS3_MICCC)

HSP 1 Score: 96.3 bits (238), Expect = 2.210e-17
Identity = 108/404 (26.73%), Postives = 150/404 (37.13%), Query Frame = 0
Query:  236 PPNAYLRVHCDPRTFPAARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGV-----------------------GGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRLGLTTHCCRSRAFDGRSRPRLYANYDTELLEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATEISGARVVAASLEAELAVGLEAARARSGDGAAAGGVPAPYGRN-----ALGMTDS-GVALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIGDTRYRGV-VGRVHRGVPADDRMDIFGPEPDSIALQAARLEFEWE---GERIVYSAKRPPW 606
            P  AY+RVH  P+ FPAA A DW  R++A   D++ VDKPPGVP+ P++DNA E A ++   AL      D                              GG          +L    RLDV TSG+++ AR +  AA  N   R R ++K Y  + A   AV +G+  H                    TE   G + G A  E R       P   R    A +G  ++    T                                      P GR       LG  ++ G+       +   A         ++  +EL TGRTHQ+R QL+A+G  I+GD  Y GV + R     P   R D      D + L AA +  + +   G +       PPW
Sbjct:  131 PNGAYVRVHVHPKRFPAAVACDWGGRIIARGRDWVAVDKPPGVPAGPSLDNATECATYRVARALRRLETTDXXXXXXXXXXXXXXXXXXXXXXXXXXXSWWGGDGXXXXXXGTTLTTTHRLDVATSGVLVLARRSSFAAEFNDALRRRRVTKTYECVTAR--AVPVGVLEHW-------------------TEESSGAREGPARFEMREL----EPGDPRWRDVAADGKYSDDAFVT--------------------------------------PDGRKLCVLRVLGCEETEGLTKRLTKRLAGEAXXXXXXSRAYVSTIELVTGRTHQIRAQLSAIGCPILGDVLYGGVDLSREGGATPRVLRDD------DRLCLHAAEMRMDADSALGPKGTTLRAGPPW 465          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: K7PEZ7_9BACT (Pseudouridine synthase n=1 Tax=uncultured bacterium TaxID=77133 RepID=K7PEZ7_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 6.570e-16
Identity = 56/164 (34.15%), Postives = 75/164 (45.73%), Query Frame = 0
Query:  213 FVGTSFAHMRLRRLDGSEALSPPPPNAYLRVHCDPRTFPAARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAV 376
             V     +   +R+D   ALSP     Y+RVH +P+ FP     DW   +V   + ++VV+KP G+P   T+DN VEN LHQ  +AL  A                        L+   RLD   SGLI+ AR        NRL  +R + KRY AL+   P V
Sbjct:   40 LVSFGSVYQDRQRVDSDRALSP---GQYIRVHLNPKRFPV-EGIDWATTIVHRDKAFVVVNKPAGIPVHATLDNQVENLLHQLRVALGGA------------------------LYVTQRLDTDVSGLIVVARTQEFQRQFNRLLADRKLKKRYRALVTTAPEV 175          
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Match: A0A3M7KTQ2_AUXPR (PseudoU_synth_2 domain-containing protein (Fragment) n=3 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KTQ2_AUXPR)

HSP 1 Score: 89.7 bits (221), Expect = 1.340e-15
Identity = 100/385 (25.97%), Postives = 140/385 (36.36%), Query Frame = 0
Query:  236 PPNAYLRVHCDPRTFPAARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALASASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSAATLNRLFRERGISKRYLALLAPGPAVRLGLTTHCCRSRAFDGRSRPRLYANYDTELLEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATEISGARVVAASLEAELAVGLEAARARSGDGAAAGGVPAPYGRNALGMTDSGVALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIGDTRYRGVVGRVHRGVPADDRM-DIFGPEPDSIALQAARLEFEWE-GERIVYSAKRP-PWASENSAQYLEH 617
            P  AYLRVH   + FPAA   DW  RL+AVT+++++V+KP GVP   T+DNA E+ + QA   L                            H + RLD CT G+++  R   +    +       + K Y  L        LGL TH                      L  G +  G             P+   A  E   G  A                                                          +L  E A    A E     P   CV+ L TGRTHQ+R Q+AA+G  ++GDT Y G + R     P +  M D+  PE  +I LQAAR+    E G  +++  + P PW ++ S+   +H
Sbjct:  104 PAGAYLRVHAHVKRFPAADCADWAARLLAVTDEHVIVNKPCGVPVPITVDNARESVVTQASQPL----------------------------HIIHRLDRCTEGVVVLGRGVQAVRAFHDAQHSGRVQKTYRLLCHGSQPPPLGLLTH---------------------HLAVGTRIPGC------------PIHSVAHDEPRPGTAA---------------------------------------------------------CSLMIESAESAPALESVHGGPVIDCVVRLVTGRTHQIRAQMAAVGHPLVGDTLY-GPLARRPGQAPVEVAMGDLQEPEL-AIGLQAARMVVMAEDGATVLHDWRAPEPWWTQASSCGPQH 368          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig874.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGX6_ECTSI2.090e-13947.93PseudoU_synth_2 domain-containing protein n=2 Tax=... [more]
A0A835YKX4_9STRA1.500e-5536.18Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A5J4Z0G8_PORPP1.340e-4130.10RNA pseudouridine synthase 6, chloroplastic n=1 Ta... [more]
A0A7S0H4S4_9CRYP1.230e-1833.16Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
L1JPX0_GUITC1.570e-1827.48PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A812V5M1_9DINO4.710e-1827.78Hypothetical protein n=1 Tax=Symbiodinium necroapp... [more]
A0A812T6T9_9DINO1.140e-1727.50Hypothetical protein n=2 Tax=Symbiodinium TaxID=29... [more]
C1DZS3_MICCC2.210e-1726.73PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
K7PEZ7_9BACT6.570e-1634.15Pseudouridine synthase n=1 Tax=uncultured bacteriu... [more]
A0A3M7KTQ2_AUXPR1.340e-1525.97PseudoU_synth_2 domain-containing protein (Fragmen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 476..615
e-value: 1.5E-11
score: 46.2
NoneNo IPR availableGENE3D3.30.2350.10Pseudouridine synthasecoord: 253..434
e-value: 5.4E-18
score: 67.3
NoneNo IPR availablePIRSRPIRSR606225-1PIRSR606225-1coord: 268..432
e-value: 1.2E-9
score: 35.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..185
NoneNo IPR availablePANTHERPTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEcoord: 125..612
IPR006145Pseudouridine synthase, RsuA/RluA-likePFAMPF00849PseudoU_synth_2coord: 268..543
e-value: 5.7E-20
score: 72.0
IPR006145Pseudouridine synthase, RsuA/RluA-likeCDDcd02869PseudoU_synth_RluA_likecoord: 269..590
e-value: 1.43574E-23
score: 96.2524
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 509..607
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 256..432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig874contigA-nodosum_M_contig874:35891..37759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig874.6.1mRNA_A-nodosum_M_contig874.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig874 35524..37783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig874.6.1 ID=prot_A-nodosum_M_contig874.6.1|Name=mRNA_A-nodosum_M_contig874.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=623bp
MVLFKLGAPSTCLGLRYLAHDLKMQGAGVGVGVGWSSGRTAAAASTSGTS
VLPILPLGASNTAIRGHPYTTTCPSPTTSLQMATSRPGSTVAAETTYVND
RRIVHISTRYAQLRSEQQQRSGSSELPPTISDIIARQAAVSVRRAAELVR
FGAVYIGEETVNGGGKTRTPGKGKTKRHPGGEGEEPVSVVKGTAISEAQR
RKINSKSAGEPPFVGTSFAHMRLRRLDGSEALSPPPPNAYLRVHCDPRTF
PAARATDWRERLVAVTEDYLVVDKPPGVPSVPTIDNAVENALHQAGLALA
SASIFDRSNSGGVGGTDNDSPLPPPSLHAVSRLDVCTSGLIIFARNAPSA
ATLNRLFRERGISKRYLALLAPGPAVRLGLTTHCCRSRAFDGRSRPRLYA
NYDTELLEGGKWGGAWIEARSTILLCAPVTGRAVVEAVEGDRAEAEAATE
ISGARVVAASLEAELAVGLEAARARSGDGAAAGGVPAPYGRNALGMTDSG
VALDAEGAMMTAAREQQRYHPPHLCVMELGTGRTHQLRLQLAAMGAAIIG
DTRYRGVVGRVHRGVPADDRMDIFGPEPDSIALQAARLEFEWEGERIVYS
AKRPPWASENSAQYLEHSENYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR020103PsdUridine_synth_cat_dom_sf