prot_A-nodosum_M_contig8689.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8689.1.1
Unique Nameprot_A-nodosum_M_contig8689.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length124
Homology
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: D8LIA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA1_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 2.310e-23
Identity = 54/92 (58.70%), Postives = 67/92 (72.83%), Query Frame = 0
Query:    1 MSTLVDNVERFVGRMPPPSRH-W-------RKSHDSGGFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSVRIPCRKLEDFPRELVGRRVSL 84
            MS L+DNV+ FVGR+ P  RH W        K   SGGFVGLK+Q  TCYM+++LQQLFMVP LR+ IL  ++P R L+DFPRELVGRRV++
Sbjct: 1175 MSALLDNVDVFVGRVLPSLRHRWGYECSFDAKRPQSGGFVGLKNQGCTCYMNSLLQQLFMVPALRKGILEAKLPRRNLQDFPRELVGRRVAV 1266          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 3.810e-22
Identity = 53/92 (57.61%), Postives = 66/92 (71.74%), Query Frame = 0
Query:    1 MSTLVDNVERFVGRMPPPSRH-W-------RKSHDSGGFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSVRIPCRKLEDFPRELVGRRVSL 84
            MS L+DNV+ FVGR+ P  RH W        K   SGGFVGLK+Q  TCYM+++LQQLFMVP LR+ IL  ++P R L+DFP ELVGRRV++
Sbjct: 1979 MSALLDNVDVFVGRVIPSLRHRWGYECSFDAKRPQSGGFVGLKNQGCTCYMNSLLQQLFMVPALRKCILEAKLPRRNLQDFPLELVGRRVAV 2070          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: A0A6A7FXP4_9CRUS (Ubiquitin carboxyl-terminal hydrolase 24-like (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FXP4_9CRUS)

HSP 1 Score: 58.2 bits (139), Expect = 2.510e-7
Identity = 28/56 (50.00%), Postives = 40/56 (71.43%), Query Frame = 0
Query:   16 PPPSRHWR-----KSHDSGGFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSVRIP 66
            P   R W+     +S  + GFVGLK+   TCYM++VLQQLF+VPG+RE++L+V +P
Sbjct:   43 PQAIRDWQVNPTMESRAACGFVGLKNGGATCYMNSVLQQLFLVPGVREDLLAVSLP 98          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: K8Z0L3_NANGC (Ubiquitin carboxyl-terminal hydrolase 24 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z0L3_NANGC)

HSP 1 Score: 56.6 bits (135), Expect = 8.670e-7
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   21 HWRKSHDSGGFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSVRIPCRKL---EDF-PRELVGRRV 82
            H  KS+  G +VGL++Q  TCYM+++LQQLFMVP LR+ IL+ R+  R++   E F   EL+GR++
Sbjct:  466 HETKSYP-GQYVGLRNQGCTCYMNSLLQQLFMVPRLRDAILAARVKRRRMVSGEMFRDEELIGRQI 530          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: A0A4D9D1L0_9STRA (USP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1L0_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.910e-7
Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   21 HWRKSHDSGGFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSVRIPCRKL---EDF-PRELVGRRV 82
            H  KS+  G +VGL++Q  TCYM+++LQQLFMVP LR+ IL+ R+  R++   E F   EL+GR++
Sbjct: 2143 HETKSYP-GQYVGLRNQGCTCYMNSLLQQLFMVPRLRDAILAARVKRRRMVSGEMFRDEELIGRQI 2207          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: A0A8B7PGJ4_HYAAZ (Ubiquitinyl hydrolase 1 n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7PGJ4_HYAAZ)

HSP 1 Score: 55.8 bits (133), Expect = 1.650e-6
Identity = 25/42 (59.52%), Postives = 35/42 (83.33%), Query Frame = 0
Query:   24 KSHDSGGFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSVRI 65
            +S  + GFVGLK+   TCYM++VLQQLF+VPG+RE++LS+ I
Sbjct: 1788 ESRAACGFVGLKNGGATCYMNSVLQQLFLVPGVREDLLSITI 1829          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: A0A5N5SUG1_9CRUS (Ubiquitin carboxyl-terminal hydrolase 24 (Fragment) n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SUG1_9CRUS)

HSP 1 Score: 54.3 bits (129), Expect = 5.520e-6
Identity = 24/34 (70.59%), Postives = 31/34 (91.18%), Query Frame = 0
Query:   30 GFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSV 63
            GFVGLK+   TCYM++VLQQLF+VPG++E+ILSV
Sbjct: 1043 GFVGLKNGGATCYMNSVLQQLFLVPGIQEDILSV 1076          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: A0A553NTA7_TIGCA (Ubiquitinyl hydrolase 1 n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NTA7_TIGCA)

HSP 1 Score: 54.3 bits (129), Expect = 5.680e-6
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   28 SGGFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSVRIPCRKLED 72
            + GFVGLK+   TCYM++VLQQLFM+ G+RE ILS    C   E+
Sbjct: 1569 NNGFVGLKNAGATCYMNSVLQQLFMIDGIREGILSAEGACNDPEE 1613          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: A0A7S3Q2Z7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2Z7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 5.700e-6
Identity = 32/103 (31.07%), Postives = 51/103 (49.51%), Query Frame = 0
Query:    2 STLVDNVERFVGRMPPPSRHWRKSHDSG--------------GFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSVRIPCRKLEDFP------RELVGRRVSL 84
            S L   ++  +    P  +H    H  G               + GL++Q  TCYM++VLQQLFM+P LRE++ S  IP +   +        ++LVG+++SL
Sbjct: 1646 SALASRIQNIISAASPSLQHKWGQHSIGLEENCTLGNTAITPKYSGLRNQGCTCYMNSVLQQLFMMPALREKLSSATIPSQLRSEGGTAKAQGKDLVGKQISL 1748          
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Match: T1IKX5_STRMM (Ubiquitinyl hydrolase 1 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IKX5_STRMM)

HSP 1 Score: 53.9 bits (128), Expect = 7.730e-6
Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   25 SHDSGGFVGLKSQVKTCYMHAVLQQLFMVPGLREEILSV 63
            S  S G+VGLK+   TCYM++V+QQLF+VPG+RE ILSV
Sbjct: 1591 SRASCGYVGLKNAGATCYMNSVIQQLFLVPGVREAILSV 1629          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8689.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIA1_ECTSI2.310e-2358.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKZ1_9PHAE3.810e-2257.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6A7FXP4_9CRUS2.510e-750.00Ubiquitin carboxyl-terminal hydrolase 24-like (Fra... [more]
K8Z0L3_NANGC8.670e-748.48Ubiquitin carboxyl-terminal hydrolase 24 (Fragment... [more]
A0A4D9D1L0_9STRA8.910e-748.48USP domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A8B7PGJ4_HYAAZ1.650e-659.52Ubiquitinyl hydrolase 1 n=1 Tax=Hyalella azteca Ta... [more]
A0A5N5SUG1_9CRUS5.520e-670.59Ubiquitin carboxyl-terminal hydrolase 24 (Fragment... [more]
A0A553NTA7_TIGCA5.680e-655.56Ubiquitinyl hydrolase 1 n=1 Tax=Tigriopus californ... [more]
A0A7S3Q2Z7_9STRA5.700e-631.07Hypothetical protein (Fragment) n=2 Tax=Chaetocero... [more]
T1IKX5_STRMM7.730e-664.10Ubiquitinyl hydrolase 1 n=1 Tax=Strigamia maritima... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 19..104
e-value: 8.2E-10
score: 39.9
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 28..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8689contigA-nodosum_M_contig8689:2009..3100 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8689.1.1mRNA_A-nodosum_M_contig8689.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8689 1998..3287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8689.1.1 ID=prot_A-nodosum_M_contig8689.1.1|Name=mRNA_A-nodosum_M_contig8689.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=124bp
MSTLVDNVERFVGRMPPPSRHWRKSHDSGGFVGLKSQVKTCYMHAVLQQL
FMVPGLREEILSVRIPCRKLEDFPRELVGRRVSLPQDEAAVQVCCRCRER
FFTCGTESFAPSTPFAWWTPAHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain-like_cys_pep_sf