prot_A-nodosum_M_contig864.26.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig864.26.1
Unique Nameprot_A-nodosum_M_contig864.26.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length169
Homology
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: D7FXW6_ECTSI (ABC transporter ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW6_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 3.140e-34
Identity = 79/140 (56.43%), Postives = 96/140 (68.57%), Query Frame = 0
Query:   12 YALLATVEE-LVFHFGGDRIMLAAAQTWLAHASLHKALRCLGQLAILRPSAARMNALILQGTDGPYPETGFARKGRDSGPATKGGWTNDGPEVSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVL 150
            YAL++ VEE L F FG  R+ L   Q WLA+ASL  AL  LGQ+A LR +AARM A+ L       PE G    G+++G  T+GGW+NDGPE +DGLRL+G+SFTP G    ALS +DLHAPAGSVV V+G AGAGK  L
Sbjct:  855 YALVSVVEEELAFQFGTARVTLLITQVWLAYASLQGALSGLGQVARLRSTAARMQAIALA-----RPENGGG--GKETGLGTEGGWSNDGPEAADGLRLQGVSFTPSGRTRQALSSVDLHAPAGSVVAVLGGAGAGKTAL 987          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: A0A6H5KVL8_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL8_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 7.630e-34
Identity = 79/140 (56.43%), Postives = 93/140 (66.43%), Query Frame = 0
Query:   12 YALLATVEE-LVFHFGGDRIMLAAAQTWLAHASLHKALRCLGQLAILRPSAARMNALILQGTDGPYPETGFARKGRDSGPATKGGWTNDGPEVSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVL 150
            YAL++ VEE L F FG  R+ L   Q WLA+ASL  AL  LGQ+A LRP+AARM A+ L      +PE     K  D+G  T+GGW+NDGPE  DGLRL G+SF P G    ALS +DLHAPAGSVV V+G AGAGK  L
Sbjct:  692 YALVSVVEEELAFQFGTARVTLVITQVWLAYASLQGALSGLGQVARLRPTAARMQAIALA-----WPENSGGEK--DTGLGTEGGWSNDGPEADDGLRLLGVSFRPSGRTRQALSSVDLHAPAGSVVAVLGGAGAGKTAL 824          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: A0A538QRJ4_9DELT (ABC transporter ATP-binding protein n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A538QRJ4_9DELT)

HSP 1 Score: 70.9 bits (172), Expect = 3.360e-11
Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
Query:   94 GGWTNDGPEVSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVLV 151
            GG  + GP   DG+R EG+SFT PGS+ PALSGIDLH P GS + +VGE G+GK  L+
Sbjct:  331 GGTASAGPRPGDGVRFEGVSFTYPGSRQPALSGIDLHIPPGSKLAIVGENGSGKTTLI 388          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: A0A7V9L966_9DELT (ABC transporter ATP-binding protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V9L966_9DELT)

HSP 1 Score: 62.8 bits (151), Expect = 2.160e-8
Identity = 29/52 (55.77%), Postives = 38/52 (73.08%), Query Frame = 0
Query:  100 GPEVSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVLV 151
            GP+  DG+R +G+SF  PGS+ PAL GIDLH P GS + +VGE G+GK  L+
Sbjct:  402 GPKPGDGIRFQGVSFHYPGSREPALDGIDLHIPPGSKLAIVGENGSGKTTLI 453          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: UPI00034D0FD2 (ABC transporter ATP-binding protein/permease n=1 Tax=Nocardiopsis kunsanensis TaxID=141693 RepID=UPI00034D0FD2)

HSP 1 Score: 60.8 bits (146), Expect = 9.860e-8
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0
Query:   84 KGRDSGPATKGGWTNDGPE-VSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVLV 151
            +G  +G   + G T + P  +++GL L+ +SFT PG++ PAL GI  H PAGSV+ VVGE G+GK  LV
Sbjct:  328 RGHVAGELAREGCTEEPPRSLTEGLALDRVSFTYPGTERPALDGISAHLPAGSVIAVVGEYGSGKTTLV 396          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: A0A1R3UYK5_9ACTN (Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Nocardiopsis sp. JB363 TaxID=1434837 RepID=A0A1R3UYK5_9ACTN)

HSP 1 Score: 60.5 bits (145), Expect = 1.340e-7
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
Query:  101 PEV-SDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVLV 151
            PE+ S+G+ L+G+SFT PG++  AL G+D H PAGSVV VVGE G+GK  LV
Sbjct:  336 PEILSEGISLDGVSFTYPGAESAALDGVDAHLPAGSVVAVVGEYGSGKSTLV 387          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: A0A2W4QAI5_9PROT (ABC transporter permease n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4QAI5_9PROT)

HSP 1 Score: 59.3 bits (142), Expect = 3.330e-7
Identity = 31/65 (47.69%), Postives = 39/65 (60.00%), Query Frame = 0
Query:   87 DSGPATKGGWTNDGPEVSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVLV 151
            D+ P   GG    GP+  DGLRLE +SFT PGS  PALS + LH   G  + +VG  G+GK  L+
Sbjct:  322 DTPPRAPGGTATRGPDPGDGLRLENVSFTYPGSAQPALSDVTLHLRPGRSLALVGANGSGKTTLI 386          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: W6K494_9MICO (ABC transporter related n=1 Tax=Tetrasphaera australiensis Ben110 TaxID=1193182 RepID=W6K494_9MICO)

HSP 1 Score: 58.9 bits (141), Expect = 4.550e-7
Identity = 33/66 (50.00%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   87 DSGPATKGGWTNDGPE-VSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVLV 151
            D   +T G  T   P+ ++DG+R +G+ F  PG+    L G+DLH PAGSVV VVGE GAGK  LV
Sbjct:  334 DFAQSTAGTGTQAPPDRLTDGIRFDGVGFAYPGTTRRVLDGVDLHLPAGSVVAVVGENGAGKSTLV 399          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: UPI00178A34CB (ABC transporter ATP-binding protein/permease n=1 Tax=Actinopolymorpha pittospori TaxID=648752 RepID=UPI00178A34CB)

HSP 1 Score: 58.5 bits (140), Expect = 6.160e-7
Identity = 52/151 (34.44%), Postives = 76/151 (50.33%), Query Frame = 0
Query:   13 ALLATVEELVFHFG-GDRIMLAAAQTWLAHASLHKAL----RCLG-QLAILRP-SAARMNALILQGTDG-----PYPETGFARKGRDSGPATKGGWTNDGPEVSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVLV 151
            A+LA V +L+F  G G  I+LA  +    H ++ + +    RC   Q A++ P  A      +L+  D       Y  +  A +G  SGPA +         + DG+  E +SF  PG++  AL  + LH PAG+VV +VGE GAGK  LV
Sbjct:  244 AVLANVRDLIFAVGFGGAILLALWRAAAGHGTIGEVVITVYRCQRMQAAVMSPIQAVAALGSVLRAADRMLWLREYAGS-VAARGSGSGPAPE--------RIRDGIAFERVSFRYPGTEAWALRDVSLHIPAGTVVALVGENGAGKTTLV 385          
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Match: A0A510US64_9CELL (ABC transporter permease n=3 Tax=Cellulomonas TaxID=1707 RepID=A0A510US64_9CELL)

HSP 1 Score: 58.2 bits (139), Expect = 8.400e-7
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 0
Query:  102 EVSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVL 150
            ++SDG+RLEG++F  PG++   L GIDLH PAG+ V +VGE GAGK  L
Sbjct:  350 DLSDGIRLEGVTFRYPGTEATVLDGIDLHLPAGTSVALVGENGAGKSTL 398          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig864.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW6_ECTSI3.140e-3456.43ABC transporter ATP-binding protein n=1 Tax=Ectoca... [more]
A0A6H5KVL8_9PHAE7.630e-3456.43ABC transporter domain-containing protein n=1 Tax=... [more]
A0A538QRJ4_9DELT3.360e-1158.62ABC transporter ATP-binding protein n=2 Tax=Deltap... [more]
A0A7V9L966_9DELT2.160e-855.77ABC transporter ATP-binding protein n=1 Tax=Deltap... [more]
UPI00034D0FD29.860e-847.83ABC transporter ATP-binding protein/permease n=1 T... [more]
A0A1R3UYK5_9ACTN1.340e-759.62Lipid A export ATP-binding/permease protein MsbA n... [more]
A0A2W4QAI5_9PROT3.330e-747.69ABC transporter permease n=1 Tax=Proteobacteria ba... [more]
W6K494_9MICO4.550e-750.00ABC transporter related n=1 Tax=Tetrasphaera austr... [more]
UPI00178A34CB6.160e-734.44ABC transporter ATP-binding protein/permease n=1 T... [more]
A0A510US64_9CELL8.400e-757.14ABC transporter permease n=3 Tax=Cellulomonas TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 93..153
e-value: 1.7E-6
score: 29.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 103..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig864contigA-nodosum_M_contig864:309168..313167 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig864.26.1mRNA_A-nodosum_M_contig864.26.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig864 309144..313500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig864.26.1 ID=prot_A-nodosum_M_contig864.26.1|Name=mRNA_A-nodosum_M_contig864.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=169bp
MACAAGGLGVAYALLATVEELVFHFGGDRIMLAAAQTWLAHASLHKALRC
LGQLAILRPSAARMNALILQGTDGPYPETGFARKGRDSGPATKGGWTNDG
PEVSDGLRLEGISFTPPGSKMPALSGIDLHAPAGSVVTVVGEAGAGKVVL
VASQDFSVSGWADVTMLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase