prot_A-nodosum_M_contig8555.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8555.1.1
Unique Nameprot_A-nodosum_M_contig8555.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length121
Homology
BLAST of mRNA_A-nodosum_M_contig8555.1.1 vs. uniprot
Match: D7FLA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLA8_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 4.730e-18
Identity = 47/105 (44.76%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    2 TDWPATVAPRWAIARNHAATVEEDVIREAPVVPTG-------------GQAGRWQAITDTTTIGSSLIDLKEKGATPQDRRFLYVDSIKRTTAALGVGVETIEPD 93
            T+WP    P+WA+ +NH A  E +  ++AP+V TG             G  G  Q      TI SSL+ LKE G TPQDRRFLYVD +K  TAA+ +GVET+ P+
Sbjct:  260 TEWPEGAKPKWAVTKNHEALSEGE--QQAPLVATGRLQCATDGDKGGGGAGGGVQWDAGNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPE 362          
BLAST of mRNA_A-nodosum_M_contig8555.1.1 vs. uniprot
Match: A0A6H5JJG6_9PHAE (SWIM-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJG6_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 5.870e-17
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    2 TDWPATVAPRWAIARNHAATVEEDVIREAPVVPTG------------GQAG---RWQAITDTTTIGSSLIDLKEKGATPQDRRFLYVDSIKRTTAALGVGVETIEPD 93
            ++WP    P WA+A NH A  E +  ++AP+V TG            G AG   +W A     TI SSL+ LKE G TPQDRRFLYVD +K  TAA+ +GVET+ P+
Sbjct:  705 SEWPEGAKPTWAVALNHKALSEGE--KQAPLVATGRLQCATEGDEGGGGAGAGVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPE 807          
BLAST of mRNA_A-nodosum_M_contig8555.1.1 vs. uniprot
Match: A0A6H5JCK5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK5_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 6.300e-12
Identity = 35/61 (57.38%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   36 GGQAG---RWQAITDTTTIGSSLIDLKEKGATPQDRRFLYVDSIKRTTAALGVGVETIEPD 93
            GG AG   +W A     TI SSL+ LKE G TPQDRRFLYVD +K  TAA+ +GVET+ P+
Sbjct:    4 GGGAGAGVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPE 62          
BLAST of mRNA_A-nodosum_M_contig8555.1.1 vs. uniprot
Match: A0A6H5JMX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMX3_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.790e-11
Identity = 40/83 (48.19%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   36 GGQAG---RWQAITDTTTIGSSLIDLKEKGATPQDRRFLYVDSIKRTTAALGVGVETIEPD--HHLLNHLVTSLVAQVGRVAS 113
            GG AG   +W A     TI SSL+ LKE G TPQDRRFLYVD +K  TAA+ +GVET+ P+    L+       V Q  R+ S
Sbjct:  103 GGGAGAGVQWDA--GNVTIESSLVQLKETGPTPQDRRFLYVDCLKEATAAVSLGVETVPPEALRALVRQFKQXGVHQASRIGS 183          
BLAST of mRNA_A-nodosum_M_contig8555.1.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 4.590e-10
Identity = 33/90 (36.67%), Postives = 50/90 (55.56%), Query Frame = 0
Query:    4 WPATVAPRWAIARNHAATVEEDVIREAPVVPTGGQAGRWQAITDTTTIGSSLIDLKEKGATPQDRRFLYVDSIKRTTAALGVGVETIEPD 93
            WP    P+W +A  H+   ++D +R   VV        WQAI +  TI + L  + + G + QDRR LYV+ +K+ TAA+  GV+ + PD
Sbjct:  430 WPPECKPQWMVALVHSDASKDDQVRPPTVVV----GDTWQAIPEDATIETRLQRVAQTGQSCQDRRLLYVEMLKKATAAVSSGVQLVPPD 515          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8555.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FLA8_ECTSI4.730e-1844.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJG6_9PHAE5.870e-1745.79SWIM-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5JCK5_9PHAE6.300e-1257.38Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMX3_9PHAE2.790e-1148.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWW3_9PHAE4.590e-1036.67MULE domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8555contigA-nodosum_M_contig8555:16068..16430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8555.1.1mRNA_A-nodosum_M_contig8555.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8555 16041..16430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8555.1.1 ID=prot_A-nodosum_M_contig8555.1.1|Name=mRNA_A-nodosum_M_contig8555.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=121bp
MTDWPATVAPRWAIARNHAATVEEDVIREAPVVPTGGQAGRWQAITDTTT
IGSSLIDLKEKGATPQDRRFLYVDSIKRTTAALGVGVETIEPDHHLLNHL
VTSLVAQVGRVASVEVRGRG*
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