prot_A-nodosum_M_contig8484.1.4 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: D7FPF8_ECTSI (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF8_ECTSI) HSP 1 Score: 123 bits (309), Expect = 5.080e-32 Identity = 65/90 (72.22%), Postives = 71/90 (78.89%), Query Frame = 0
Query: 2 KRAKVGGKLWRDHGLHHVQECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEVEAFESGADLERAM 91
KRAKV R +ECIREPGWS+KVSLSR+ADHFIFGIESV MLPP KELLKDSIQVLRQKCDS++AEVEAFESG D + AM
Sbjct: 278 KRAKVA----RPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPP---KELLKDSIQVLRQKCDSMIAEVEAFESGVDFDEAM 360
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: A0A6H5JLW5_9PHAE (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW5_9PHAE) HSP 1 Score: 123 bits (308), Expect = 7.370e-32 Identity = 65/90 (72.22%), Postives = 71/90 (78.89%), Query Frame = 0
Query: 2 KRAKVGGKLWRDHGLHHVQECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEVEAFESGADLERAM 91
KRAKV R +ECIREPGWS+KVSLSR+ADHFIFGIESV MLPP KELLKDSIQVLRQKCDS++AEVEAFESG D + AM
Sbjct: 280 KRAKVA----RPRDCTMCRECIREPGWSDKVSLSRVADHFIFGIESVGMLPP---KELLKDSIQVLRQKCDSMIAEVEAFESGIDFDEAM 362
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: A0A6G0XIR3_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIR3_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.390e-12 Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 0
Query: 20 QECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEVEAFE 82
+ECIR PGWS+KV L R++DHFIF +E+V MLPP ++LL ++++VL KCD + + A +
Sbjct: 261 RECIRAPGWSDKVELGRVSDHFIFSVETVGMLPP---EDLLPEALKVLMTKCDVAVESLNAMD 320
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: A0A024TZC9_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZC9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.800e-12 Identity = 31/63 (49.21%), Postives = 46/63 (73.02%), Query Frame = 0
Query: 20 QECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEVEAFE 82
+ECIR PGWS+KV + R++DHFIF +E+V MLPP ++LL ++I+VL KCD + + A +
Sbjct: 261 RECIRAPGWSDKVKMGRVSDHFIFSVETVGMLPP---EDLLPEAIKVLVAKCDVAVESLNAVD 320
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: A0A2U1M4I5_ARTAN (DNA-directed RNA polymerase, dimerization n=2 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1M4I5_ARTAN) HSP 1 Score: 70.1 bits (170), Expect = 4.330e-12 Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 6 VGGK----LWRDHGLHHVQECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEV 78
+GGK + R +ECIREPGW EKV+L R+ DHFIF IES LPP + L +++++L KC+S++ E+
Sbjct: 296 IGGKQRATVARPRACTLCRECIREPGWEEKVALRRVKDHFIFTIESTGALPP---EVLFTEAVKILEDKCESVITEL 369
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: A0A1V9ZSM6_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZSM6_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 7.240e-12 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 0
Query: 20 QECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEVEAFE 82
+ECIR PGW EKV L R++DHFIF +E+V ML P +ELL ++++VL KCD L + + +
Sbjct: 261 RECIRAPGWDEKVKLGRVSDHFIFSVETVGMLKP---EELLPEALKVLMSKCDVALESLNSID 320
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: A0A7S2RJI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJI0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.080e-11 Identity = 30/65 (46.15%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 20 QECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEVEAFESG 84
+ECIR+ GW E+V L R ADH+IF +E+V ML PR +++K++I++LR+KC L E++ +G
Sbjct: 277 RECIRQEGWDERVKLYRAADHYIFKVEAVGMLAPR---DIVKEAIRILREKCTDFLGELQGDPAG 338
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: A0A2J6LN13_LACSA (RPOLD domain-containing protein n=4 Tax=Asteraceae TaxID=4210 RepID=A0A2J6LN13_LACSA) HSP 1 Score: 68.9 bits (167), Expect = 1.190e-11 Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0
Query: 2 KRAKVGGKLWRDHGLHHVQECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEV 78
KRA V R +ECIREPGW EKV+L R+ DHFIF IES LPP + L +++Q+L KC+ ++ E+
Sbjct: 327 KRATVA----RPRACTLCRECIREPGWEEKVALRRVKDHFIFTIESTGALPP---EVLFTEAVQILEDKCERVITEM 396
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: A0A5D6XHD4_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHD4_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.440e-11 Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 0
Query: 20 QECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEVEAFESGAD 86
+ECIREPGW EK+ L R++DHFIF +ESV M+ P +ELL +++ VL KC+ L E+F D
Sbjct: 270 RECIREPGWDEKIKLGRVSDHFIFSVESVGMIKP---EELLPEALNVLVDKCNLAL---ESFNQADD 330
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Match: W4GC85_9STRA (DNA-directed RNA polymerases I and III subunit RPAC1 n=13 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GC85_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.620e-11 Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = 0
Query: 20 QECIREPGWSEKVSLSRIADHFIFGIESVRMLPPRWRKELLKDSIQVLRQKCDSLLAEVEAFE 82
+ECIR PGWS+KV L R++DHFIF +E+V ML P ++LL ++I+VL KCD + + A +
Sbjct: 261 RECIRAPGWSDKVKLGRVSDHFIFSVETVGMLRP---EDLLPEAIKVLVAKCDVAVESLNAVD 320 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8484.1.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig8484.1.4 ID=prot_A-nodosum_M_contig8484.1.4|Name=mRNA_A-nodosum_M_contig8484.1.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=93bpback to top |