prot_A-nodosum_M_contig847.8.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig847.8.3
Unique Nameprot_A-nodosum_M_contig847.8.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1480
Homology
BLAST of mRNA_A-nodosum_M_contig847.8.3 vs. uniprot
Match: D7FYS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYS2_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 2.600e-104
Identity = 207/435 (47.59%), Postives = 267/435 (61.38%), Query Frame = 0
Query:  620 VKAELRDFPGTRHCRSRLKKIFCHEWVQQEYYNGVSTGQVDPTMPQMEFLRRRMGSGRLYALLLEDSKDYLRPGVYTDTDVELVGIHFAHALIAQEAEKVHAMQMPRVDADGAAGGSNKWKPDVGVSDSRAATAAALGQDLPSGVMRAAGGNGGSSCSKAGSHGV-SWAERLRNFQIDVPTT-TYDLTSSDETEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEWDGQGVDASVVIQHRRRFDARCCAYEALINASRNDKTSIFMERAQRLHQDHAAIITAKRATLEGTLENVRSQLLGREDQLHQLRMEQSHINPMDGASIAAFADNEAAILSRITEKKLQMSMILEEASKVVDWDRTAELARREAMQRAADVHGHGHGGAFTAESAREKNDLVQAMMSQKATILLLTTLCKIPGPWLAPNGHVR 1052
            +K  L +F GTR+ RSRLK+   HEW +QEY  G++ GQVD  M +MEF+RRR+  G LYALL ++S+DYLR G +TD DVEL+G+ FA A  ++E     A   P+ D                                 SG   AA     +    A   GV SWA+RLR+FQID+P + TYD  +SD + G                                      WDG GVDA+ VI+HRR+FD RC AYEAL  ASRNDKT+  +E+  RL QDHAAI+ AKR TLEGTL+NVR QL GREDQL  + MEQ  +NP+D   +A   ++EAAI++R+ EKK+QM+MI++EA+KVV W++TAELARREAM  AAD+HGHG  G F   SA+E+N+LVQ+MMSQK  I+LL+T CK+ GPWLAP+G+VR
Sbjct:    1 MKTVLPEFQGTRYARSRLKQTLAHEWARQEYRTGIALGQVDRGMTEMEFVRRRVEGGSLYALLEQESRDYLRVGPFTDADVELLGMSFAQAQASKELPPPAAA--PKPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGKDAAA-----AKAGAAAEGGVASWADRLRDFQIDIPASATYDGLASDSSRG---------GGAADRTDGQVVAEAAQKGGSQQEDDASAWDGIGVDAATVIRHRRQFDLRCRAYEALNTASRNDKTNGLLEKTHRLRQDHAAIVAAKRVTLEGTLQNVRQQLNGREDQLRHVHMEQRGVNPLDTTVVAGLNESEAAIMTRVAEKKVQMAMIIDEANKVVQWEQTAELARREAMHHAADMHGHG--GGFAPGSAKERNELVQSMMSQKVNIMLLSTFCKLRGPWLAPSGYVR 417          
BLAST of mRNA_A-nodosum_M_contig847.8.3 vs. uniprot
Match: D7FYS1_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS1_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.300e-34
Identity = 68/80 (85.00%), Postives = 75/80 (93.75%), Query Frame = 0
Query:   45 MVLKHAQVVGEKKTKRGAYLAGLAEGPSVAQDLGLTPKDRLISVEGLDVKTLPFDRIVALIRKASFPLTLIWSRQRKDGV 124
            MVLKHAQV GE++ KRGAYLAGLAEGPS+AQDLGL+PKDRLI VEGLDVKTLPFDRIV LIRKA+FPLTL+WSRQRK G+
Sbjct:    1 MVLKHAQVFGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRIVGLIRKATFPLTLVWSRQRKAGI 80          
BLAST of mRNA_A-nodosum_M_contig847.8.3 vs. uniprot
Match: A0A6H5KV99_9PHAE (PDZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV99_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 7.850e-34
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0
Query:   25 QQWDVFEVVLSKPSGRQKLGMVLKHAQVVGEKKTKRGAYLAGLAEGPSVAQDLGLTPKDRLISVEGLDVKTLPFDRI 101
            QQWD FEVVLSKPSG QKLGMVLKHAQV GE++ KRGAYLAGLAEGPS+AQDLGL+PKDRLI VEGLDVKTLPFDRI
Sbjct:   22 QQWDRFEVVLSKPSGSQKLGMVLKHAQVCGEERLKRGAYLAGLAEGPSLAQDLGLSPKDRLILVEGLDVKTLPFDRI 98          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig847.8.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYS2_ECTSI2.600e-10447.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FYS1_ECTSI1.300e-3485.00PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KV99_9PHAE7.850e-3488.31PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 15..124
e-value: 1.7E-10
score: 42.7
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 24..120
IPR001478PDZ domainPFAMPF00595PDZcoord: 32..114
e-value: 2.8E-6
score: 27.6
IPR001478PDZ domainPROSITEPS50106PDZcoord: 31..120
score: 12.5061
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1354..1370
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1407..1423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1371..1388
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1112..1159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 543..565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1462..1479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1192..1243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..425
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1112..1296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1169..1183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 311..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1338..1479
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 29..115
e-value: 1.09169E-8
score: 51.4135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig847contigA-nodosum_M_contig847:105296..152358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig847.8.3mRNA_A-nodosum_M_contig847.8.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig847 103476..161577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig847.8.3 ID=prot_A-nodosum_M_contig847.8.3|Name=mRNA_A-nodosum_M_contig847.8.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1480bp
MEAPATATPSPRPVAAEGSPRASSQQWDVFEVVLSKPSGRQKLGMVLKHA
QVVGEKKTKRGAYLAGLAEGPSVAQDLGLTPKDRLISVEGLDVKTLPFDR
IVALIRKASFPLTLIWSRQRKDGVRVPENLPGTAVVAGARRAVESRVLEV
PPASTSSDIEPCPDAAAGGAGRKPASEAVNGSTASVGPPLGSLGSQFRPS
SSSSSGGATWHSEEKKRQQHQQQQQQHSLTAGSSCGVASSSTAGDGGAHK
GGVFPDGGTCVVDSSFSDGNNAASSLNQHRNLNHNVDDNLNLAYVAEEWI
RTTTRGRATARATREAEVLGDGGTGSEARRASTGMPQVQQRNPHQDHLER
LEQQYRHQQPPGTSMRQPVHHSRQRQPWPHSMMPPTQRMPHWQQQSQQER
QLQRGGGGGSMSIGSGNSSSGSGLPLSEPAAGAVSGVIRHQEVGTNVVPL
PPPPANPSWVQGSAAATTTAGGADGGDEGGVSEAGVGCREKKVEAVVLKE
REAEALAMREAMRARRRERDKARREKVRREIAAGGTMRMLHDRRQQAEGQ
GGAIPGVIGGGGGQQPLNRPHRGAFGKGKLGGGIGAGVVGARALEIEEGG
GLLASAASAAGAPEWLNPLVKAELRDFPGTRHCRSRLKKIFCHEWVQQEY
YNGVSTGQVDPTMPQMEFLRRRMGSGRLYALLLEDSKDYLRPGVYTDTDV
ELVGIHFAHALIAQEAEKVHAMQMPRVDADGAAGGSNKWKPDVGVSDSRA
ATAAALGQDLPSGVMRAAGGNGGSSCSKAGSHGVSWAERLRNFQIDVPTT
TYDLTSSDETEGVGVGVDSAGARGTGETDRGVGVVGGKGGDVDVDVDVVE
WDGQGVDASVVIQHRRRFDARCCAYEALINASRNDKTSIFMERAQRLHQD
HAAIITAKRATLEGTLENVRSQLLGREDQLHQLRMEQSHINPMDGASIAA
FADNEAAILSRITEKKLQMSMILEEASKVVDWDRTAELARREAMQRAADV
HGHGHGGAFTAESAREKNDLVQAMMSQKATILLLTTLCKIPGPWLAPNGH
VRRHPSAGGGGGVGAGIMGGMKSAAASSVRKVPLGNPLGYSDEKSSEALN
STATIANNSSSSSRSILIGSPNPNPSSATGGMQICSSGVGGSGISSSDDR
INKSCGSSYPYPGSGKRGNGYEGQQQQRSDARHPLTPQGKPEPKPSEQQR
PTANNSPPEQKIKSIKLRLRTPSSSSLLSPRSSSWSSSKDDRPVTVTDPA
ALLSAPDSTTEADVTAAAATADEGGGRGGSDGGASTSAITRRRSHKINFA
TASTTTPSPRALWDSVAGMGAVMARGGKEAAMARMAAENRAVEEAAVAEA
AAGEEGGVDDDDDDGNDDGNYSGEDSDRAMKALGADDDGARGRGGTSGSG
SESEAVEDGYDEYHGHDEDNEAGEGGGSTIDGMAMEEGYQGEDGIGPLSF
QLAGSSCGSDAADAGEEEEEEGSGAEIND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ