prot_A-nodosum_M_contig8462.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8462.6.1
Unique Nameprot_A-nodosum_M_contig8462.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length42
Homology
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BLAST of mRNA_A-nodosum_M_contig8462.6.1 vs. uniprot
Match: A0A6H5JNI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI3_9PHAE)

HSP 1 Score: 47.8 bits (112), Expect = 4.680e-5
Identity = 19/27 (70.37%), Postives = 25/27 (92.59%), Query Frame = 0 
Query:    3 LPRPLWVLGNEGGKTVIELVLLNLVKA 29
            +PRPLW+LG  GGKT++ELVLLNLV++
Sbjct:  116 VPRPLWLLGGSGGKTIVELVLLNLVRS 142
[Close]
BLAST of mRNA_A-nodosum_M_contig8462.6.1 vs. uniprot
Match: D7FND7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND7_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 4.680e-5
Identity = 19/27 (70.37%), Postives = 25/27 (92.59%), Query Frame = 0 
Query:    3 LPRPLWVLGNEGGKTVIELVLLNLVKA 29
            +PRPLW+LG  GGKT++ELVLLNLV++
Sbjct:  132 VPRPLWLLGGSGGKTIVELVLLNLVRS 158
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8462.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNI3_9PHAE4.680e-570.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FND7_ECTSI4.680e-570.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8462contigA-nodosum_M_contig8462:15032..16436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8462.6.1mRNA_A-nodosum_M_contig8462.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8462 15018..16436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8462.6.1 ID=prot_A-nodosum_M_contig8462.6.1|Name=mRNA_A-nodosum_M_contig8462.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=42bp
EYLPRPLWVLGNEGGKTVIELVLLNLVKAYSGASPPRASHG*
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