prot_A-nodosum_M_contig836.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig836.2.1
Unique Nameprot_A-nodosum_M_contig836.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length192
Homology
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5KLT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLT9_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 1.070e-29
Identity = 69/192 (35.94%), Postives = 109/192 (56.77%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCN-NRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H  A M  L   +RT+  G++++  T + + L  + DAD A      RSVSGG V   G ++S F R Q+  T + +E++YVAL ++  ++ FL Q+  FM P +    N V ED + AI++A+N  S+   +HIDV+HH +R+ V+     V +  S  QRAD LTK++
Sbjct:  119 TRPDIANAVRAVARYCASPTLVHWNAAMDILGDARRTSHFGISFQRGTVEGLSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCNPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 310          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.860e-29
Identity = 69/192 (35.94%), Postives = 106/192 (55.21%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNN-RVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H  A M  L   +RT+  G++++  T +   L  + DAD A      RSVSGG V   G ++S F R Q+  T + +E++YVAL E+   + FL Q+  FM P +      V ED + AI++A+N  S+   +HIDV+HH +R+ V+     V +  S  QRAD LTK++
Sbjct:    9 TRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 200          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 5.130e-29
Identity = 71/193 (36.79%), Postives = 111/193 (57.51%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPL--IDCNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H KA +  L  ++RT+ +G+T+E      M + V+VDAD+A      RSVSGG VM  G  ++ F R Q+  T + +E++YVA+A++  ++ FL QV  FM P   + C   V ED + AI++A N  ++   +HIDV+HH +R+ V+     +    +  Q AD LTKAI
Sbjct:  114 TRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIP-VFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAI 305          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 8.240e-29
Identity = 71/193 (36.79%), Postives = 112/193 (58.03%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPL--IDCNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H KA +  L  ++RT+ +G+T+E      M + V+VDAD+A      RSVSGG VM  G  ++ F R Q+  T + +E++YVA+A++  ++ FL QV  FM P   + C   V ED + AI++A N  ++   +HIDV+HH +R+ V+     + +  +  Q AD LTKAI
Sbjct:  231 TRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIP-VFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAI 422          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 9.480e-29
Identity = 70/193 (36.27%), Postives = 111/193 (57.51%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAP--LIDCNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H KA +  L  ++RT+ +G+T+E      M + V+VDAD+A      RSVSGG VM  G  ++ F R Q+  T + +E++YVA+A++  ++ FL QV  FM P   + C   V ED + AI++  N  ++   +HIDV+HH +R+ V+     + +  +  Q AD LTKAI
Sbjct:  169 TRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIP-VFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAI 360          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5KJP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJP2_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 1.940e-28
Identity = 71/194 (36.60%), Postives = 111/194 (57.22%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNNR---VHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H KA +  L  ++RT+ +G+T+E      M + V+VDAD+A      RSVSGG VM  G  ++ F R Q+  T + +E +YVA+A++  ++ FL QV   M  L+D +     V ED + AI++A N  ++   +HIDV+HH +R+ V+     + +  S  Q AD LTKAI
Sbjct:  167 TRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNASKAADRRSVSGGVVMCGGGGVTWFSRTQKCVTLSTTEVEYVAIADVLKEVLFLRQVWRLM--LLDADMSCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAI 358          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5L3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H4_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.130e-28
Identity = 72/193 (37.31%), Postives = 111/193 (57.51%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPL--IDCNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H KA +  L  ++RT+ +G+T+E      M + V+VDAD+A      RSVSGG VM  G  ++ F R Q+  T + +E++YVA A++  ++ FL QV  FM P   + C   V ED + AI++A N  ++   +HIDV+HH +R+ V+     + +  S  Q AD LTKAI
Sbjct:  206 TRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKGADCRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAFADVLKEVLFLRQVWRFMLPDTGMPCIP-VFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAI 397          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 2.210e-28
Identity = 72/193 (37.31%), Postives = 112/193 (58.03%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPL--IDCNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H +A +  L  + RT+ LG+T+   +   + + V+VDAD+A      RSVSGG VM  G  IS F R Q+  T + +E++YV+LA++  ++ FL QV  FM P   + C   V ED + AI++A+N  S+   +HIDV+HH +R+ V      + + +S  Q AD LTKA+
Sbjct:  231 TRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIP-VFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.290e-28
Identity = 72/193 (37.31%), Postives = 112/193 (58.03%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPL--IDCNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H KA +  L  ++RT+ +G+T+E      M + V+VDAD+A      RSVSGG VM  G  ++ F R Q+  T + +E++YVA+A++  ++ FL QV  FM P   + C   V ED + AI++A N  ++   +HIDV+HH +R+ V+     + +  S  Q AD LTKAI
Sbjct: 1265 TRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIP-VFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAI 1456          
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5KQN5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQN5_9PHAE)

HSP 1 Score: 120 bits (301), Expect = 3.930e-28
Identity = 73/193 (37.82%), Postives = 111/193 (57.51%), Query Frame = 0
Query:    2 TRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPL--IDCNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 192
            TR D+A     +A++  +P   H KA +  L  ++RT+ +G+T+E      M + V+VDAD+A      RSVSGG VM  G  ++ F R Q+  T   +ES+YVA+A++  ++ FL QV  FM P   + C   V ED + AI++A N  ++   +HIDV+HH +R+ V+     + +  S  Q AD LTKAI
Sbjct:  621 TRPDIAKAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLYTTESEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIP-VFEDNQGAIQIAYNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAI 812          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLT9_9PHAE1.070e-2935.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEZ8_9PHAE3.860e-2935.94Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE5.130e-2936.79Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE8.240e-2936.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE9.480e-2936.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJP2_9PHAE1.940e-2836.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3H4_9PHAE2.130e-2837.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE2.210e-2837.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JHY5_9PHAE2.290e-2837.31Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5KQN5_9PHAE3.930e-2837.82Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 57..192
e-value: 9.04907E-33
score: 112.562

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig836contigA-nodosum_M_contig836:53922..54497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig836.2.1mRNA_A-nodosum_M_contig836.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig836 53922..55370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig836.2.1 ID=prot_A-nodosum_M_contig836.2.1|Name=mRNA_A-nodosum_M_contig836.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=192bp
MTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATE
DVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMS
ESDYVALAEIANKLRFLWQVKAFMAPLIDCNNRVHEDTEDAIKMAENRFS
SRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI
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