mRNA_A-nodosum_M_contig836.2.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 258 bits (658), Expect = 1.090e-74 Identity = 161/485 (33.20%), Postives = 257/485 (52.99%), Query Frame = 1
Query: 10 EMDGQIVRGVWKVVDR-RKGNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELL---------VLSETKQDDFPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKTSVISFLRREHHFRRADGPQNDAKIA----PMRGIPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNN-RVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
E++G I G + + + +G V+ + VFKWK + G++ K K R + +GF++ G+ Y E+ SP +SIR+ +A+ + E LD+ AF ++ + E+ ++LP G ++ RL K +YGL A + K+ +L+ GFE+S +DPCV R +V+ II ++VD++L V+ E D P K+LGE+ ++L C +RDR+ T+ Q+ Y ++V ERF I +TS I P ND++ +P+RE G L+ +AN TR + + T+A+ P KA K L LK TA L + Y+ T + V+VDAD A RSVSG V++ G +S F Q+ + + SE++Y+A+ + + F+ + + P V ED E AI +AEN SS R +HIDV+HH +R+ + G+ +V + S EQ AD+LTKA+
Sbjct: 235 EVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-----------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 708
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 247 bits (631), Expect = 1.050e-72 Identity = 159/484 (32.85%), Postives = 256/484 (52.89%), Query Frame = 1
Query: 1 LKREMDGQIVRGVWKVVDRRKGNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELLV--LSETKQDD--------FPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKT-SVISFLRREHHFRRADGPQNDAKIAPMRGIPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
+K E D G W V R+ V+ TK VF K + G + ++K R + GF ++ G+ + E+ + + + SIR+ L+V + QLDV AFL AD+ E++Y+E P+G ++V +L K +YGL AG W K G LI GF+ +D C++ + G I +YVD+++V ++T+ D+ F IK+LG + + L I DR R + +Q Y +T+ ERF + V + + +ADGP++D + A M PYR G L VA TR D+A+ L++F +NPGP H A ++ L+ LK T G++Y G E+ + V+ DAD +D RSVSG +M++G I + Q + SE++Y+AL+ ++ ++ + + I +V ED + AI +A N R +HID++HH VRD V + + Y ++ Q AD+LTK++
Sbjct: 13 VKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPV-VFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQLADILTKSL 494
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 253 bits (646), Expect = 1.670e-70 Identity = 158/485 (32.58%), Postives = 263/485 (54.23%), Query Frame = 1
Query: 1 LKREMDGQIVRGVWKVVDRR-KGNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELLVLSETKQDD---------FPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKTSVISFLRREHHFRRAD-GPQNDAKIAPMRGIPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNN-RVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
++ E +G + G + VD +G + +K F WK ++G++D +K R + +GF +I + Y SSSP P+ +SI++ LAV DV A+ A + EE++++LP G D +++ + ++ +YGL +G W L+ GFE+ +ADPCVFR+ VV+IIV+YVD++LV + + FP K+LGE ++ C I RD + T+ Q Y ++ ERF+++ TS I AD GP+ + + P REA G+++ V+ +R D+++ +A+ P H A+ K L LK T LG+TY+ + + L+V+VDA +A D RSVSG A + G +S + Q + + + +E++Y+A E + F+ V +F+AP ++ +V ED + AI + +N SS R +HIDV++H +R G V++ + EQ AD+LTKA+
Sbjct: 756 MREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG------ADLGPKREDEEGGEW--PVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG--LGLAVYVDASYADTEDR-RSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 253 bits (646), Expect = 2.700e-70 Identity = 158/485 (32.58%), Postives = 263/485 (54.23%), Query Frame = 1
Query: 1 LKREMDGQIVRGVWKVVDRR-KGNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELLVLSETKQDD---------FPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKTSVISFLRREHHFRRAD-GPQNDAKIAPMRGIPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNN-RVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
++ E +G + G + VD +G + +K F WK ++G++D +K R + +GF +I + Y SSSP P+ +SI++ LAV DV A+ A + EE++++LP G D +++ + ++ +YGL +G W L+ GFE+ +ADPCVFR+ VV+IIV+YVD++LV + + FP K+LGE ++ C I RD + T+ Q Y ++ ERF+++ TS I AD GP+ + + P REA G+++ V+ +R D+++ +A+ P H A+ K L LK T LG+TY+ + + L+V+VDA +A D RSVSG A + G +S + Q + + + +E++Y+A E + F+ V +F+AP ++ +V ED + AI + +N SS R +HIDV++H +R G V++ + EQ AD+LTKA+
Sbjct: 1135 MREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG------ADLGPKREDEEGGEW--PVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG--LGLAVYVDASYADTEDR-RSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 253 bits (646), Expect = 2.740e-70 Identity = 158/485 (32.58%), Postives = 263/485 (54.23%), Query Frame = 1
Query: 1 LKREMDGQIVRGVWKVVDRR-KGNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELLVLSETKQDD---------FPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKTSVISFLRREHHFRRAD-GPQNDAKIAPMRGIPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNN-RVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
++ E +G + G + VD +G + +K F WK ++G++D +K R + +GF +I + Y SSSP P+ +SI++ LAV DV A+ A + EE++++LP G D +++ + ++ +YGL +G W L+ GFE+ +ADPCVFR+ VV+IIV+YVD++LV + + FP K+LGE ++ C I RD + T+ Q Y ++ ERF+++ TS I AD GP+ + + P REA G+++ V+ +R D+++ +A+ P H A+ K L LK T LG+TY+ + + L+V+VDA +A D RSVSG A + G +S + Q + + + +E++Y+A E + F+ V +F+AP ++ +V ED + AI + +N SS R +HIDV++H +R G V++ + EQ AD+LTKA+
Sbjct: 1155 MREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG------ADLGPKREDEEGGEW--PVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG--LGLAVYVDASYADTEDR-RSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 253 bits (646), Expect = 2.790e-70 Identity = 158/485 (32.58%), Postives = 263/485 (54.23%), Query Frame = 1
Query: 1 LKREMDGQIVRGVWKVVDRR-KGNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELLVLSETKQDD---------FPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKTSVISFLRREHHFRRAD-GPQNDAKIAPMRGIPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNN-RVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
++ E +G + G + VD +G + +K F WK ++G++D +K R + +GF +I + Y SSSP P+ +SI++ LAV DV A+ A + EE++++LP G D +++ + ++ +YGL +G W L+ GFE+ +ADPCVFR+ VV+IIV+YVD++LV + + FP K+LGE ++ C I RD + T+ Q Y ++ ERF+++ TS I AD GP+ + + P REA G+++ V+ +R D+++ +A+ P H A+ K L LK T LG+TY+ + + L+V+VDA +A D RSVSG A + G +S + Q + + + +E++Y+A E + F+ V +F+AP ++ +V ED + AI + +N SS R +HIDV++H +R G V++ + EQ AD+LTKA+
Sbjct: 1298 MREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG------ADLGPKREDEEGGEW--PVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSG--LGLAVYVDASYADTEDR-RSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1771
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 252 bits (644), Expect = 3.120e-70 Identity = 163/485 (33.61%), Postives = 255/485 (52.58%), Query Frame = 1
Query: 1 LKREMDGQIVRGVWKVVDRR-KGNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELLVLSETKQDD---------FPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKT-SVISFLRREHHFRRADGPQNDAKIAPMRGIPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLID-CNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
+K+EMDG G + +++ +G + TK VF +K + G + +K R + +GF ++ G Y SSS P SSI++A+A R D+ A+ A + EELYV + DG +V ++++ +YGL +G W + L+ G+E+ +ADPCVFR+ GKVV IIV+YVD+++ + ++ + P+KDLGE +Y C I RD ++ T Q+ Y + +RF I T S + E +R D P D P R+A G L+ A TR D+A + + + P KA+++ L L T LG+TY + + L V+VDA +A RSV+G AV + G +S + QR+ + + SE++Y+A E + F+ V +F+AP +V ED + AI + +N FSS R +HIDV+ H +R+ G VEY + EQ AD+LTKA+
Sbjct: 755 IKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDK--------PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSG--LDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKAL 1229
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 252 bits (644), Expect = 5.140e-70 Identity = 163/489 (33.33%), Postives = 256/489 (52.35%), Query Frame = 1
Query: 1 LKREMDGQIVRGVWKVVDRR-KGNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELLVLSETKQDD---------FPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKTSVISFLRREHHFRRAD-----GPQNDAKIAPMRGIPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLID-CNNRVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
+K+EMDG G + +++ +G + TK VF +K + G + +K R + +GF ++ G Y SSS P SSI++A+A R D+ A+ A + EELYV + DG +V ++++ +YGL +G W + L+ G+E+ +ADPCVFR+ GKVV IIV+YVD+++ + ++ + P+KDLGE +Y C I RD ++ T Q+ Y + +RF I T+ AD GP+ D + P P R+A G L+ A TR D+A + + + P KA+++ L L T LG+TY + + L V+VDA +A RSV+G AV + G +S + QR+ + + SE++Y+A E + F+ V +F+AP +V ED + AI + +N FSS R +HIDV+ H +R+ G VEY + EQ AD+LTKA+
Sbjct: 1308 IKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTP----------ADPNADLGPKRDDE--PGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSG--LDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKAL 1782
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 249 bits (635), Expect = 6.950e-69 Identity = 151/465 (32.47%), Postives = 245/465 (52.69%), Query Frame = 1
Query: 64 GNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELL---------VLSETKQDDFPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKTSVISFLRREHHFRRADGPQNDAKIAPMRG---IPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNN-RVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
G V+ + VFKWK + G++ K K R + +GF++ G+ Y E+ SP +S R+ +A+ + E D+ AF+++++ E+++++P G +V RL K +YGL A + K+ EL GFE+S +DPCV R +VV ++ ++VD++L V+ D P K+LGE+ ++L C RDRK T+ Q+ Y ++V ERF I +TS I A +D + G +P+RE G+L+ +A+ TR D++ +A+ P H KA K L L TA L + ++ + + V+VDAD A RSVSG V + + R Q+ + + SE++Y+A+ + + F+ + F+ P + V ED E AI +AEN SS R +HIDV+HH +R+ + G+ +V + S EQ AD+LTKA+
Sbjct: 930 GCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIP----------ASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 1384
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE) HSP 1 Score: 247 bits (630), Expect = 2.000e-68 Identity = 151/465 (32.47%), Postives = 244/465 (52.47%), Query Frame = 1
Query: 64 GNTVLGTKIVFKWKVGQDGRVDKYKRRFLGQGFRKIKGIHYQESSSPIPTQSSIRMALAVMALLDWEGRQLDV*MAFLEADVVEELYVELPDGYHDSPNQVGRLQKVMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDELL---------VLSETKQDDFPIKDLGEIPYYLECHITRDRKVRTVVFDQQRYAQTVTERFEIRKTSVISFLRREHHFRRADGPQNDAKIAPMRG---IPYREAAGALI*VANMTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEDVMKLSVWVDADHARCLDTPRSVSGGAVMLDGESISLFLRAQRVTTTAMSESDYVALAEIANKLRFLWQVKAFMAPLIDCNN-RVHEDTEDAIKMAENRFSSRRRRHIDVKHHMVRDAVDGGIPDVEYFKSGEQRADVLTKAI 1419
G V+ + VFKWK + G++ K K R + +GF++ G+ Y E+ SP +S R+ +A+ + E D+ AF+++++ E+++++P G +V RL K +YGL A + K+ EL GFE+S +DPCV +VV ++ ++VD++L V+ D P K+LGE+ ++L C RDRK T+ Q+ Y ++V ERF I +TS I A +D + G +P+RE G+L+ +A+ TR D++ +A+ P H KA K L L TA L + ++ + + V+VDAD A RSVSG V + + R Q+ + + SES+Y+A+ + + F+ + F+ P + V ED E AI +AEN SS R +HIDV+HH +R+ + G+ +V + S EQ AD+LTKA+
Sbjct: 720 GCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLCFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIP----------ASLNNDDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSESEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 1174 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig836.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig836.2.1 >prot_A-nodosum_M_contig836.2.1 ID=prot_A-nodosum_M_contig836.2.1|Name=mRNA_A-nodosum_M_contig836.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=192bp MTRLDLAYTAHTLAKFGDNPGPEHRKAVMKALQCLKRTASLGVTYEGATEback to top mRNA from alignment at A-nodosum_M_contig836:53922..55370- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig836.2.1 ID=mRNA_A-nodosum_M_contig836.2.1|Name=mRNA_A-nodosum_M_contig836.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1449bp|location=Sequence derived from alignment at A-nodosum_M_contig836:53922..55370- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig836:53922..55370- >mRNA_A-nodosum_M_contig836.2.1 ID=mRNA_A-nodosum_M_contig836.2.1|Name=mRNA_A-nodosum_M_contig836.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=576bp|location=Sequence derived from alignment at A-nodosum_M_contig836:53922..55370- (Ascophyllum nodosum dioecious)back to top |