prot_A-nodosum_M_contig823.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig823.2.1
Unique Nameprot_A-nodosum_M_contig823.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length437
Homology
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BLAST of mRNA_A-nodosum_M_contig823.2.1 vs. uniprot
Match: D7FW85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW85_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.080e-25
Identity = 113/263 (42.97%), Postives = 141/263 (53.61%), Query Frame = 0 
Query:    1 MQGVSSVLDAVSRTVEPKPGELVEESSPPSASRDDLSEAADRAETHDDSEEGPKSKTHTAC------DRGQGASHDSSRSSSSS--PDPFDRISNMARSSLAGSLKLVSAATRGVGDAVFQAGTVAEDLAGGTGQVAEDVVRVVQGAVGRARDDALKSGNR------NDAEEGQTESESGKWRSSPSELQAAASPESTSAGGEDAETTSATAP-----GVMRVWKLCRETGAFALMMLEEALREVVGLFRSKNGALPSAPHHA 244
            + G+SS+LDA SR V+          SP +A    LS  AD A +HD +  GP + + +A       D   GA+  + RSSS    PDPFDRI ++A +SLAGSLKL+SAA  GVGDAVFQAG +AE LAGGTGQVAED VRVVQ  VG ARDD +K  NR      +D  +       GK     +      +PE      E    T   A       V+  W+  R+ G  A+   E  +R+  GLFR KNGALP AP  A
Sbjct:   23 VNGLSSILDAASRGVKAHV-------SPANAQPPTLS--ADPARSHD-AGGGPAAGSSSASPDDSGEDTAPGATGQTGRSSSQGGDPDPFDRIGSVALTSLAGSLKLLSAAVGGVGDAVFQAGVLAEGLAGGTGQVAEDTVRVVQRFVGWARDDMVKLNNRRGQGGHHDVRKNVDAPGPGKRPPPATPPVGVRTPEPAPHAAEKDGFTPDPALVSDGLSVLEAWEGVRDLGRLAV---EALVRQAAGLFRLKNGALPPAPRIA 272
[Close]
BLAST of mRNA_A-nodosum_M_contig823.2.1 vs. uniprot
Match: A0A6H5L3C8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C8_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 5.030e-15
Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = 0 
Query:    1 MQGVSSVLDAVSRTVE----PKPGELVEESSPPSASRD--DLSEAADRAETHDDSEEG--PKSKTHTACDRGQGASHDSSRSSSSSPDPFDRISNMARSSLAGSLKLVSAATRGVGDAVFQAGTVAEDLAGGTGQVAEDV 132
            + G+SS+LDA SR V+    P   +    S+ P+ S D    S A   + + DDS E   P +K HT    GQG            PDPFDRI ++A +SLAGSLKL+SAA  GVGDAVFQAG +AE LAGGTGQVA ++
Sbjct:   81 VNGLSSMLDAASREVKADVSPANAQPSTLSADPTRSHDAGGGSAAGSSSASPDDSGEDTVPVAKGHTGRSSGQGGD----------PDPFDRIGSVALTSLAGSLKLLSAAVGGVGDAVFQAGVLAEGLAGGTGQVAGEL 210
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig823.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW85_ECTSI1.080e-2542.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3C8_9PHAE5.030e-1547.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..352
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 307..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig823contigA-nodosum_M_contig823:13263..15250 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig823.2.1mRNA_A-nodosum_M_contig823.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig823 13259..15912 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig823.2.1 ID=prot_A-nodosum_M_contig823.2.1|Name=mRNA_A-nodosum_M_contig823.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=437bp
MQGVSSVLDAVSRTVEPKPGELVEESSPPSASRDDLSEAADRAETHDDSE
EGPKSKTHTACDRGQGASHDSSRSSSSSPDPFDRISNMARSSLAGSLKLV
SAATRGVGDAVFQAGTVAEDLAGGTGQVAEDVVRVVQGAVGRARDDALKS
GNRNDAEEGQTESESGKWRSSPSELQAAASPESTSAGGEDAETTSATAPG
VMRVWKLCRETGAFALMMLEEALREVVGLFRSKNGALPSAPHHAALIILV
LVICRGRRRPLQNDSSQQQQQQQLYLQSAEMAPPTTSQRSHAVAGQEPPS
ARAAAASPGLASSSRSLFPHTPMSSANGQLPSFGTHDGAPDGLDALLPSP
AQALARVPHARAGRTRTAGRGELATGLVHEEIDVEGAAATTSRRAASEEE
ATRGLWDWRRVFRWTGLRRPRGEGIVRWRWILLVLL*
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