prot_A-nodosum_M_contig1175.33.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1175.33.2
Unique Nameprot_A-nodosum_M_contig1175.33.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length102
Homology
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: D8LC11_ECTSI (COX assembly mitochondrial protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC11_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 2.730e-42
Identity = 70/97 (72.16%), Postives = 86/97 (88.66%), Query Frame = 0
Query:    1 MATVKQGGRDDRLNWSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDREMELYRASLEDKS 97
            MAT+K GGR+DRL+WSKRAE RL++ELKEIALK+CDDSVAKFAACA+EKGM VVFSCREQ+ LMN CL+QHTN+ SF++YK +RE+EL+R +   KS
Sbjct:    1 MATLKDGGRNDRLSWSKRAEHRLREELKEIALKRCDDSVAKFAACAREKGMLVVFSCREQNALMNSCLNQHTNEESFDRYKFEREIELHRETQAAKS 97          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: A0A8K1C5Z8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5Z8_PYTOL)

HSP 1 Score: 93.6 bits (231), Expect = 7.620e-23
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    3 TVKQGGRDDRLNWSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDREMEL 88
            T K+  R  RL+WS +AE +L+ EL +IA+ KC D+  KFA CA+E G+ V+F CREQ++ MN+CLHQ+TN   F  YK  RE E+
Sbjct:    9 TAKERFRSSRLSWSNQAEHKLRQELNDIAIAKCRDTTEKFAVCARESGLMVIFRCREQNKAMNDCLHQYTNDEQFRVYKEKREKEI 94          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: A0A7S2US42_9STRA (COX assembly mitochondrial protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US42_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 6.990e-21
Identity = 41/80 (51.25%), Postives = 59/80 (73.75%), Query Frame = 0
Query:    9 RDDRLNWSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDREMEL 88
            R+ RL+WS +A+ RLQ EL E+AL+KC D V  FA C+K+ G  V++SCREQ++ MNECLH +T++   E Y+ +RE +L
Sbjct:    8 RNSRLSWSNQAQYRLQQELNEVALQKCADQVKAFADCSKDSGFLVIWSCREQNKAMNECLHSYTSQECLEAYQREREQQL 87          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: A0A6G0WRQ8_9STRA (COX assembly mitochondrial protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRQ8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.810e-19
Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 0
Query:    9 RDDRLNWSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDREMEL 88
            R +RL WS +AE +L+ EL  IAL+KC +  + F  C+KE GM VVF CREQ+R++NECLHQ+TNK + E  + ++  E+
Sbjct:   19 RSERLQWSNQAENKLKQELNAIALQKCREYTSAFVECSKENGMMVVFKCREQNRVLNECLHQYTNKEALEALRAEKLNEI 98          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: W7TAA2_9STRA (COX assembly mitochondrial protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAA2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.590e-18
Identity = 42/82 (51.22%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    7 GGRDDRLNWSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDREMEL 88
            G R+ RL +SKRAEQ L+DEL   A K+C + +A FAACAKE GM+V+F CR  +  MN CL Q+T++  FE++K  R + L
Sbjct:   18 GSREGRLRFSKRAEQHLRDELALHARKQCQEPMAAFAACAKENGMFVIFKCRALNNAMNACLSQYTSESKFEEWKQTRGLSL 99          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: A0A5D6XX76_9STRA (COX assembly mitochondrial protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX76_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.380e-18
Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    3 TVKQGGRDDRLNWSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDREMEL 88
            T K+  R  RL+WS +AE +L+ EL +IA+ KC D  A FAACA+E+G+ VVF CR  ++ MN+CLHQ T+   F+ Y+  R  ++
Sbjct:   16 TAKEHFRSSRLSWSNQAEHKLRQELNDIAIAKCRDVTASFAACAQEQGLLVVFKCRALNKAMNDCLHQFTSDEQFQAYRDKRSKDV 101          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: A0A485L188_9STRA (COX assembly mitochondrial protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L188_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 5.920e-18
Identity = 39/80 (48.75%), Postives = 54/80 (67.50%), Query Frame = 0
Query:    9 RDDRLNWSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDREMEL 88
            R  RL WS +AE +++ EL  IAL  C D  A F  C+KE GM VVF CREQ+R++NECLH++T+K + E  K ++  E+
Sbjct:   19 RTGRLTWSNQAENKVKQELNAIALANCRDKTAAFVECSKEHGMMVVFKCREQNRILNECLHEYTSKEALEALKANKMNEI 98          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: UPI0009F62553 (uncharacterized protein DDB_G0275933 n=2 Tax=Epidendroideae TaxID=158332 RepID=UPI0009F62553)

HSP 1 Score: 64.3 bits (155), Expect = 1.940e-11
Identity = 30/65 (46.15%), Postives = 47/65 (72.31%), Query Frame = 0
Query:   17 KRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYK 81
            K+ E+ L+ ++K+ ALK+CD  VAK+A CA  + + VV+ CR+Q++L+NECLH +TN    E+ K
Sbjct:   14 KKVEEALRSKMKQKALKECDHYVAKYAECASGRTLSVVWLCRKQAKLLNECLHDYTNDSVLEEMK 78          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: A0A7S2RG50_9STRA (COX assembly mitochondrial protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RG50_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.210e-10
Identity = 25/70 (35.71%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   15 WSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDR 84
            WSK A+++++ +    + + CDD V  F  C+KE G+ V+F CRE++++MNEC+  +T    +EQ++ ++
Sbjct:   13 WSKAADEKIRKQFLAESRRICDDKVRAFVDCSKENGLMVIFRCREENKIMNECVQNYTTDEKWEQFRKEK 82          
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Match: A0A1X2G3U4_9FUNG (COX assembly mitochondrial protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G3U4_9FUNG)

HSP 1 Score: 60.1 bits (144), Expect = 1.050e-9
Identity = 27/59 (45.76%), Postives = 43/59 (72.88%), Query Frame = 0
Query:   26 ELKEIALKKCDDSVAKFAACAKEKGMWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDR 84
            ELKE ALKKCDD V +F +C+KE  + V+++CR + + MN CL++ T++   ++ KLD+
Sbjct:   25 ELKEKALKKCDDYVKEFVSCSKEHNVTVMWTCRSKLKTMNTCLNEWTSREQLDKLKLDK 83          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1175.33.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LC11_ECTSI2.730e-4272.16COX assembly mitochondrial protein n=2 Tax=Ectocar... [more]
A0A8K1C5Z8_PYTOL7.620e-2351.16Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2US42_9STRA6.990e-2151.25COX assembly mitochondrial protein n=1 Tax=Fibroca... [more]
A0A6G0WRQ8_9STRA1.810e-1950.00COX assembly mitochondrial protein n=1 Tax=Aphanom... [more]
W7TAA2_9STRA1.590e-1851.22COX assembly mitochondrial protein n=3 Tax=Monodop... [more]
A0A5D6XX76_9STRA2.380e-1846.51COX assembly mitochondrial protein n=1 Tax=Pythium... [more]
A0A485L188_9STRA5.920e-1848.75COX assembly mitochondrial protein n=1 Tax=Aphanom... [more]
UPI0009F625531.940e-1146.15uncharacterized protein DDB_G0275933 n=2 Tax=Epide... [more]
A0A7S2RG50_9STRA1.210e-1035.71COX assembly mitochondrial protein n=1 Tax=labyrin... [more]
A0A1X2G3U4_9FUNG1.050e-945.76COX assembly mitochondrial protein n=1 Tax=Hesselt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePFAMPF08583Cmc1coord: 24..87
e-value: 7.4E-16
score: 58.0
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePANTHERPTHR22977COX ASSEMBLY MITOCHONDRIAL PROTEINcoord: 17..81
NoneNo IPR availablePANTHERPTHR22977:SF5COX ASSEMBLY MITOCHONDRIAL PROTEIN HOMOLOGcoord: 17..81
NoneNo IPR availablePROSITEPS51808CHCHcoord: 32..75
score: 10.629169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1175contigA-nodosum_M_contig1175:203768..208233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1175.33.2mRNA_A-nodosum_M_contig1175.33.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1175 203193..208233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1175.33.2 ID=prot_A-nodosum_M_contig1175.33.2|Name=mRNA_A-nodosum_M_contig1175.33.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=102bp
MATVKQGGRDDRLNWSKRAEQRLQDELKEIALKKCDDSVAKFAACAKEKG
MWVVFSCREQSRLMNECLHQHTNKGSFEQYKLDREMELYRASLEDKSSAP
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013892Cyt_c_biogenesis_Cmc1-like