prot_A-nodosum_M_contig11607.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11607.2.1
Unique Nameprot_A-nodosum_M_contig11607.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length113
Homology
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 3.350e-32
Identity = 73/109 (66.97%), Postives = 86/109 (78.90%), Query Frame = 0
Query:    1 MARVARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPVEVPSLPESQMKEAVPRRLTNPRAEVAALSTGVEDVVPVVVFDANINDEYAAEA 109
            MAR ARVLLS+PAS+AVLERDFSTAGRLITG+RSR++  YVEM LFLNGN+EYIP+EVP L +SQ +EAVPRRL+NP  E   LS G  +VVP    D N  DE+A E+
Sbjct:  727 MARAARVLLSVPASSAVLERDFSTAGRLITGARSRLSAAYVEMVLFLNGNQEYIPMEVPKLSKSQGQEAVPRRLSNPNEETERLSVG--EVVP----DTN-TDEFAEES 828          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 4.310e-17
Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 0
Query:    1 MARVARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPVEVPSLPESQMKEAVPRRLTNPRAEVAALSTGVEDVVPVVVFDANIND 103
            +ARVARV+   PASAAVLERDFS AGR++T SRS M  +YVEM +FL+GN + IP ++  L E+  +  +P RL NP   +  L  GV    PV + D   +D
Sbjct:  621 LARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRLANPVERLEQLD-GV--FAPVDLTDEEASD 720          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 9.040e-17
Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 MARVARVLLSMPASAAVLERDFSTAGRLITGSRSRM-AGEYVEMTLFLNGNKEYIPVEVPSLPESQMKEAVPRRLTNP 77
            +ARVARV+   PASAAVLERDFS AGR++T SR  M +  YVEM LFL+GN + IP ++  L E+  +  +P RL NP
Sbjct:    9 LARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRLANP 86          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.290e-15
Identity = 42/77 (54.55%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    1 MARVARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPVEVPSLPESQMKEAVPRRLTNP 77
            +ARVARV++   ASAAVLE DFS AGR++T SRS M  +YVEM LFL+GN + IP ++  L E+  +  +P RL NP
Sbjct:  394 LARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRLANP 470          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.020e-13
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    1 MARVARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPVEVPSLPESQMKEAVPRRLTNPRAEVAAL 84
            +AR ARV+   PASAAVLERDF+ A  ++  SRS    +YVEM LFL+GN + IP ++P L +  ++  +P RL+NP  E+  L
Sbjct:  561 LARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGL 644          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.330e-12
Identity = 39/76 (51.32%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    1 MARVARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPVEVPSLPESQMKEAVPRRLTN 76
            +AR ARV+   PASAAVLE DF  AGR++T SRS    +YVEM LFL+GN + IP ++P+   +    A   RLTN
Sbjct:   51 LARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIPACQPT----APSARLTN 122          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: H3GTQ6_PHYRM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTQ6_PHYRM)

HSP 1 Score: 60.8 bits (146), Expect = 1.480e-9
Identity = 36/103 (34.95%), Postives = 58/103 (56.31%), Query Frame = 0
Query:    4 VARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPV-EVPSLPESQMKEAVPRR-LTNPRAEVAALSTGVEDVVPVVVFDANINDE 104
            VARV+ S+P+S+A +ERDF TAGR++T  R+ +A   V+MT FLN N+ Y+ + + P +  +   E VP   + N   E       + +      FD  ++D+
Sbjct:   10 VARVVFSLPSSSAQIERDFGTAGRMVTPQRNSLASHNVDMTTFLNCNRCYVNIAQCPKVSAAAASERVPSNVMVNILQEQDDNWNSLAEFFSATSFDLGVSDD 112          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: A0A225UGF7_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UGF7_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-9
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 0
Query:    4 VARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPVEVPSLPESQMKEAVPRRLTN 76
            VARVL S+P+S+A +ERDF TAGR++T  RS +A   V+MT FLN N+ Y  V++   P+     A  RR +N
Sbjct:   42 VARVLFSIPSSSAQIERDFGTAGRMVTSQRSSLAPCNVDMTTFLNCNRTY--VDITQCPKLSPNTADERRPSN 112          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: A0A662XG42_9STRA (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XG42_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 7.920e-9
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    4 VARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPV-EVPSLPESQMKEAVP 71
            VARVL SMP+S+A +ERDF TAGR++T  RS +A   V+M  FL+ N  Y+ + + P L +S   E +P
Sbjct:  151 VARVLFSMPSSSAQIERDFGTAGRMVTPQRSSLAPYNVDMATFLSCNTSYVDITQCPKLSQSTATERLP 219          
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Match: A0A662XSL6_9STRA (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSL6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.990e-8
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    4 VARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGNKEYIPV-EVPSLPESQMKEAVP 71
            VARVL S P+S+A +ERDF TAGR++T  RS +A   V+M  FL+ N+ Y+ + + P L +S   E +P
Sbjct:  232 VARVLFSKPSSSAQIERDFGTAGRMVTPQRSSLAPYNVDMATFLSCNRSYVDITQCPKLSQSTATERLP 300          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11607.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE3.350e-3266.97Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JZ82_9PHAE4.310e-1748.54Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KCJ3_9PHAE9.040e-1755.13Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JNY1_9PHAE2.290e-1554.55Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
D8LBK4_ECTSI1.020e-1347.62Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L5L6_9PHAE2.330e-1251.32Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
H3GTQ6_PHYRM1.480e-934.95Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ph... [more]
A0A225UGF7_9STRA1.760e-947.95Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ph... [more]
A0A662XG42_9STRA7.920e-947.83Dimer_Tnp_hAT domain-containing protein (Fragment)... [more]
A0A662XSL6_9STRA2.990e-846.38Dimer_Tnp_hAT domain-containing protein n=1 Tax=No... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 2..49
e-value: 1.3E-8
score: 34.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11607contigA-nodosum_M_contig11607:10223..10561 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11607.2.1mRNA_A-nodosum_M_contig11607.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11607 10214..10561 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11607.2.1 ID=prot_A-nodosum_M_contig11607.2.1|Name=mRNA_A-nodosum_M_contig11607.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=113bp
MARVARVLLSMPASAAVLERDFSTAGRLITGSRSRMAGEYVEMTLFLNGN
KEYIPVEVPSLPESQMKEAVPRRLTNPRAEVAALSTGVEDVVPVVVFDAN
INDEYAAEATSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf