prot_A-nodosum_M_contig11532.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11532.2.1
Unique Nameprot_A-nodosum_M_contig11532.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length93
Homology
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 5.600e-15
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNPALAAAA 56
            YLRADY+LSCKT  H YYRIYAG M++VY IGIPLLYA ILW  R  LNP + + A
Sbjct:  932 YLRADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNPRVRSEA 987          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 5.640e-15
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNPALAAAA 56
            YLRADY+LSCKT  H Y+RIYAG M+LVY IGIPLLYA ILW  R  LNP + + A
Sbjct: 1274 YLRADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNPRVRSEA 1329          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: A0A6H5JCK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK8_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.940e-14
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNP 50
            YLRADY+LSC T THT+Y++YAG M++VY IGIPLLYA ILW  R  LNP
Sbjct:  758 YLRADYSLSCNTATHTWYKVYAGVMIVVYPIGIPLLYAFILWINRESLNP 807          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: D7FRG6_ECTSI (Polymorphic membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG6_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 2.670e-14
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNP 50
            YLRADY+LSC T THT+Y++YAG M++VY IGIPLLYA ILW  R  LNP
Sbjct: 1263 YLRADYSLSCNTDTHTWYKVYAGIMIVVYPIGIPLLYAFILWINRDSLNP 1312          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.910e-12
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNPALAAAA 56
            YLRADY++ C T  H +Y++YAG M++VY +GIPLLYA ILW  R  LNP +   A
Sbjct: 1246 YLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKTGA 1301          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 5.350e-12
Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNP 50
            +LRADY +SCKT  H +Y +YAG M+ VY IGIPLLYA ILW  R  LNP
Sbjct: 1329 FLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNP 1378          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: A0A6H5JU27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU27_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 7.600e-10
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNPA--LAAAAR 57
            YLRADY + C +  H  +++YAGFM+LVY IGIP+ +A +LW KR ++NP   + +AAR
Sbjct:  216 YLRADYAIDCDSDRHKAFKLYAGFMILVYPIGIPVAFAVMLWRKRSMINPPKDILSAAR 274          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: A0A835YXM1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXM1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.210e-9
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    2 LRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKR 45
            LRADY+LSC T+TH  Y +YAG M+LVY IGIP LY ++LW +R
Sbjct:    1 LRADYSLSCDTSTHKAYCVYAGVMILVYPIGIPALYMALLWRQR 44          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: D8LRF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF6_ECTSI)

HSP 1 Score: 62.4 bits (150), Expect = 2.610e-9
Identity = 29/59 (49.15%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNPA--LAAAAR 57
            YLRADY + C +  H  +++YAG M+LVY IGIP+ +A +LW KR ++NP   + +AAR
Sbjct:   66 YLRADYGIDCDSDRHKAFKLYAGLMILVYPIGIPVAFAVMLWRKRSMINPPKDILSAAR 124          
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Match: D8LRF9_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 6.990e-9
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0
Query:    1 YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNPALA 53
            +LRADY+L C T  H  YR YAG M+LVY IGIPLLYA +L+  RH + P  A
Sbjct: 1399 FLRADYSLECYTPEHKLYRGYAGIMILVYPIGIPLLYAWLLFRHRHRIYPKQA 1451          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11532.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRH1_ECTSI5.600e-1567.86Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
A0A6H5JS31_9PHAE5.640e-1567.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK8_9PHAE1.940e-1470.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRG6_ECTSI2.670e-1470.00Polymorphic membrane protein n=1 Tax=Ectocarpus si... [more]
D7FRH4_ECTSI3.910e-1255.36Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FRH0_ECTSI5.350e-1264.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JU27_9PHAE7.600e-1050.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXM1_9STRA2.210e-963.64Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D8LRF6_ECTSI2.610e-949.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRF9_ECTSI6.990e-958.49Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11532contigA-nodosum_M_contig11532:7990..8638 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11532.2.1mRNA_A-nodosum_M_contig11532.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11532 7990..8638 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11532.2.1 ID=prot_A-nodosum_M_contig11532.2.1|Name=mRNA_A-nodosum_M_contig11532.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=93bp
YLRADYNLSCKTTTHTYYRIYAGFMLLVYAIGIPLLYASILWTKRHLLNP
ALAAAARAEQEQQTKEGKEGDQDIEGVGQSKTDGQRKKDLSLL
back to top