prot_A-nodosum_M_contig1109.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1109.10.1
Unique Nameprot_A-nodosum_M_contig1109.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length214
Homology
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 4.100e-86
Identity = 132/213 (61.97%), Postives = 160/213 (75.12%), Query Frame = 0
Query:    2 LYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFKPR----TKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            L+LL+E PAAL  Q  ED++ ISGDGQAAF++LC NYD+VTDEVIR  MEEL N P  PG+NPD+Y N+K LL  +++KMGE +SDR FKDICV GF+D+YKDVK+M++RD +F++  MQ+TMR++FLD+QSR G KGRIA RG  M T  S   D+ C  C E GH +RNCPK K R    TKP GATK CS H TTSHSDEECY QG  RP
Sbjct:   90 LFLLMEPPAALSIQKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDNYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMQSTMRNIFLDEQSRKGWKGRIAGRGFAMATTAS---DIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRP 299          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5KW66_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW66_9PHAE)

HSP 1 Score: 275 bits (704), Expect = 2.060e-84
Identity = 141/216 (65.28%), Postives = 164/216 (75.93%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCP----KFKPRTKPDGATKGCSVHRTTSHSDEECYSQGATRPNK 212
            +LY LVELPA+L  Q  ED+S+ISGDGQAAF++L  NY+KVTDEVIR TMEEL+NTP EP QNPDDY N+K LL  + EKMGE +SD +F D CVTGFT++YKDVKM+MYRD  F++D+MQTTMRHMFLD+QSRNG KG IA RG  MT   +T  +  CF C E GH  RNC     K K +TKP GA K CSVH TT HSDEEC+ QGATRP K
Sbjct:   67 ILYRLVELPASLSVQKHEDDSKISGDGQAAFQELNLNYNKVTDEVIRATMEELINTPMEPRQNPDDYFNQKHLLRHKAEKMGETISDCYFNDECVTGFTNEYKDVKMIMYRDPDFNVDKMQTTMRHMFLDEQSRNGPKGSIAGRGFAMTA--TTSEEPTCFDCGEKGHIWRNCSEKRGKGKKKTKPAGAAKWCSVHFTTRHSDEECFEQGATRPKK 280          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 7.080e-83
Identity = 133/214 (62.15%), Postives = 160/214 (74.77%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFKPR----TKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            +L+L VELPAAL  Q  ED++ ISGDGQAAF++LC NYD+VTDEVIR  MEEL N P  PG+NPDDY N+K LL  +++KMGE +SDR FKDICV GF+D+YKDVK+M++RD +F++  M +TMR++FLD+QSR G KGRIA RG  M T  S   D+ C  C E GH +RNCPK K R    TKP GATK CS H TTSHSDEECY QG  RP
Sbjct:  107 ILFLQVELPAALSIQKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPISDRRFKDICVQGFSDEYKDVKLMVFRDPTFNVLDMLSTMRNIFLDEQSRKGWKGRIAGRGFAMATTAS---DIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRP 317          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5KMR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMR7_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 3.620e-78
Identity = 124/216 (57.41%), Postives = 154/216 (71.30%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFK------PRTKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            +L+ LVELPAAL     ED++ +SGDGQAAF +L  NY++VTDEVI   + +L  T  EPG+NPDD+ NKK  L  ++EKMGE +SDR FKDICV GF++ YK +KMM++RD SFD+ QMQ TMR++FLD+Q R  TKG+IA RG  M TK S      CF C E GH +RNCP  +       +TKP GATK CSVH TT+HSDEECY+QGA RP
Sbjct:   87 ILFCLVELPAALTVHKQEDDTGLSGDGQAAFTELKANYNRVTDEVISAKLNDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKFIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTS---GPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRP 299          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 4.560e-78
Identity = 126/215 (58.60%), Postives = 156/215 (72.56%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHM-FLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFKPR----TKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            +L+LLVELPAAL  Q  ED++ ISGDGQAAF++LC NYD+VTDEVIR  MEEL N P  PG+NPDDY N+K L+  +++KMGE +SDR  KDI V GF+D+Y+DVK+M++RD +F+   MQ+T+R+  + ++QSR G KGRIA RG  M T  S   D+ C  C E GH +RNCPK K R    TKP GATK C  H TTSHSDEECY QG  RP
Sbjct:   47 ILFLLVELPAALSIQKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLIRAQLDKMGEPISDRRCKDIWVQGFSDEYRDVKLMVFRDPTFNALGMQSTIRNTSWTNEQSRKGWKGRIAGRGFAMATTAS---DIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCCKHNTTSHSDEECYQQGGKRP 258          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5KN28_9PHAE (Uncharacterized protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN28_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 7.040e-78
Identity = 126/216 (58.33%), Postives = 157/216 (72.69%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFK------PRTKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            +L+ LVELPAAL     ED++ +SGDGQAAF +L  NY++VTDEVIR  +++L  T  EPG+NPDD+ NKK  L  ++EKMGE +SDR FKDICV GF++ YKD+KMM++RD SFD+ QMQ TMR++FLD+Q R  TKG+IA RG  M TK S      CF C E GH +RNCP  +       +TKP GATK CSVH TT+HSDEECY+QGA RP
Sbjct:   87 ILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTS---GPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRP 299          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5K7P0_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P0_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 1.620e-77
Identity = 122/216 (56.48%), Postives = 155/216 (71.76%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFK------PRTKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            +L+ LVELPAAL     ED++ +SGDGQAAF +L  NY++VTDEVIR  +++L  T  EPG+NPDD+ NKK  L  ++EKMGE +SDR FKDICV GF++ YKD+KMM++RD SF++ QMQ T+R++FLD++ R  TKG IA R   M TK S      CF C E GH +RNCP  +       +TKP GATK CSVH TT+HSDEECY+QGA RP
Sbjct:   87 ILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFEVQQMQATVRNIFLDERMRKRTKGEIAGRVFAMATKTS---GPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRP 299          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 5.290e-77
Identity = 132/214 (61.68%), Postives = 157/214 (73.36%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFKPR----TKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            +L+LLVELPAAL  Q  ED++ ISGDGQAAF++LC NYD+VTDEVIR  MEEL N P  PG+NPDDY N+K LL  +++KMGE  SDR  KDI V GF+D+YKDVK+M +RD +F++  MQ+TMR++FLD+QS    KGRIA RG  M T  S   D+ C RC E GH +RNCPK K R    TKP GATK CS H TTSHSDEECY QG  RP
Sbjct:  100 ILFLLVELPAALSIQKHEDDTGISGDGQAAFEELCNNYDRVTDEVIRAKMEELENNPMNPGENPDDYFNQKHLLRTQLDKMGEPNSDRRVKDIFVQGFSDEYKDVKVMAFRDPTFNVLDMQSTMRNIFLDEQSCKRWKGRIAGRGFAMATTAS---DIICHRCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQGGKRP 310          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5KJB9_9PHAE (Uncharacterized protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJB9_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 5.980e-77
Identity = 126/216 (58.33%), Postives = 157/216 (72.69%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFK------PRTKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            +L+ LVELPAAL     ED++ +SGDGQAAF +L  NY++VTDEVIR  +++L  T  EPG+NPDD+ NKK  L  ++EKMGE +SDR FKDICV GF++ YKD+KMM++RD SFD+ QMQ TMR++FLD+Q R  TKG+IA RG  M TK S      CF C E GH +RNCP  +       +TKP GATK CSVH TT+HSDEECY+QGA RP
Sbjct:   87 ILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTS---GPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRP 299          
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Match: A0A6H5K3T5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3T5_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 4.360e-75
Identity = 126/216 (58.33%), Postives = 157/216 (72.69%), Query Frame = 0
Query:    1 MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTMEELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTDKYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTTKISTDHDVYCFRCKECGHTKRNCPKFK------PRTKPDGATKGCSVHRTTSHSDEECYSQGATRP 210
            +L+ LVELPAAL     ED++ +SGDGQAAF +L  NY++VTDEVIR  +++L  T  EPG+NPDD+ NKK  L  ++EKMGE +SDR FKDICV GF++ YKD+KMM++RD SFD+ QMQ TMR++FLD+Q R  TKG+IA RG  M TK S      CF C E GH +RNCP  +       +TKP GATK CSVH TT+HSDEECY+QGA RP
Sbjct:   87 ILFCLVELPAALTVHKHEDDTGLSGDGQAAFAELKANYNRVTDEVIRAKLDDLERTVMEPGENPDDFFNKKHRLRSQLEKMGETISDRRFKDICVQGFSEDYKDIKMMVFRDPSFDVQQMQATMRNIFLDEQMRKRTKGQIAGRGFAMATKTS---GPICFECNEPGHVRRNCPNRQREGHRAKKTKPAGATKWCSVHNTTTHSDEECYNQGAKRP 299          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1109.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF66_9PHAE4.100e-8661.97CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KW66_9PHAE2.060e-8465.28CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L580_9PHAE7.080e-8362.15CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KMR7_9PHAE3.620e-7857.41CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KXR7_9PHAE4.560e-7858.60CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KN28_9PHAE7.040e-7858.33Uncharacterized protein (Fragment) n=3 Tax=Ectocar... [more]
A0A6H5K7P0_9PHAE1.620e-7756.48CCHC-type domain-containing protein (Fragment) n=1... [more]
A0A6H5J8P7_9PHAE5.290e-7761.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJB9_9PHAE5.980e-7758.33Uncharacterized protein (Fragment) n=2 Tax=Ectocar... [more]
A0A6H5K3T5_9PHAE4.360e-7558.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 160..175
score: 9.520856
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 156..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1109contigA-nodosum_M_contig1109:47993..48634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1109.10.1mRNA_A-nodosum_M_contig1109.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1109 47993..48878 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1109.10.1 ID=prot_A-nodosum_M_contig1109.10.1|Name=mRNA_A-nodosum_M_contig1109.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=214bp
MLYLLVELPAALCFQTSEDESEISGDGQAAFKKLCGNYDKVTDEVIRGTM
EELVNTPREPGQNPDDYLNKKRLLHIRIEKMGEKVSDRWFKDICVTGFTD
KYKDVKMMMYRDSSFDIDQMQTTMRHMFLDQQSRNGTKGRIAERGTVMTT
KISTDHDVYCFRCKECGHTKRNCPKFKPRTKPDGATKGCSVHRTTSHSDE
ECYSQGATRPNKKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf