prot_A-nodosum_M_contig1097.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1097.2.1
Unique Nameprot_A-nodosum_M_contig1097.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length117
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: D7FWI8_ECTSI (Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7FWI8_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.590e-64
Identity = 108/116 (93.10%), Postives = 110/116 (94.83%), Query Frame = 0 
Query:    1 MAKTPSKKSAKAPKKAGHKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKKAG KK+ NKR ESYSSYIYKV KQVHP TGISKRGMSIMNSFINDVFERVAGESGKLT +NKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKAGDKKRTNKRTESYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERVAGESGKLTRYNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: A0A6U0X3U9_9STRA (Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A6U0X3U9_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.130e-58
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 0 
Query:    1 MAKTPSKKSAKAPKKAGHKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKKAG K K  KR ESYSSYIYKV KQVHP TGISK+GMSIMNSFIND+FER+AGE+G+L  ++KKATLSSRE+QT+VRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   15 MAKTPSKKSAKAPKKAGDKVKKGKRTESYSSYIYKVLKQVHPETGISKKGMSIMNSFINDIFERLAGEAGRLARYSKKATLSSREIQTSVRLMLPGELAKHAVSEGTKAVTKFTSS 130
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: A0A485K2U0_9STRA (Histone H2B n=29 Tax=Stramenopiles TaxID=33634 RepID=A0A485K2U0_9STRA)

HSP 1 Score: 183 bits (464), Expect = 8.960e-58
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0 
Query:    1 MAKTPSKKSAKAPKKAGHKKKANK--RIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKKSAKAPKK G K K  K  RIESYS+YIYKV KQVHP TGISKRGMSIMNSFIND+FER+A E+GKL+ +NKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKTPSKKSAKAPKKTGEKGKNRKVKRIESYSTYIYKVLKQVHPETGISKRGMSIMNSFINDIFERIASEAGKLSRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 118
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: H2B_OLILU (Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=83000 RepID=H2B_OLILU)

HSP 1 Score: 181 bits (459), Expect = 4.420e-57
Identity = 95/116 (81.90%), Postives = 108/116 (93.10%), Query Frame = 0 
Query:    1 MAKTPSKKSAKAPKKAGHKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+AKAPKKAG K+  NKR+E+YSSYIYKV KQVHP TGISKRGMSIMNSFIND+FER+AGE+ +L  +NK++TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTS+
Sbjct:    1 MAKTPSKKAAKAPKKAGSKR--NKRVETYSSYIYKVLKQVHPDTGISKRGMSIMNSFINDIFERLAGEASRLARYNKRSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSN 114
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: A0A836CJ22_9STRA (Histone H2B n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ22_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.010e-56
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0 
Query:    1 MAKTPSKKSAKAPKKA--GHKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKKA  G KKKA KR ESY SYIYKV KQVHP TGISKRGMSIMNSFINDVFER+A E+GKLT +NKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:    1 MAKIPSKKAAKAPKKAADGKKKKA-KRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 117
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: B7FWR8_PHATC (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B7FWR8_PHATC)

HSP 1 Score: 179 bits (455), Expect = 1.920e-56
Identity = 95/116 (81.90%), Postives = 106/116 (91.38%), Query Frame = 0 
Query:    1 MAKTPSKKSAKAPKKAGHKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK+SAKAPKKA    K+ KR E+YSSYIYKV KQVHP TGISK+GMSIMNSFIND+FER+A E+GKL ++NKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+SS
Sbjct:    1 MAKTPSKQSAKAPKKAATGTKSKKRTETYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIATEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSS 116
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: A0A836CJT3_9STRA (Histone H2B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT3_9STRA)

HSP 1 Score: 180 bits (457), Expect = 6.400e-55
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 0 
Query:    1 MAKTPSKKSAKAPKKA--GHKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAK PSKK+AKAPKKA  G KKKA KR ESY SYIYKV KQVHP TGISKRGMSIMNSFINDVFER+A E+GKLT +NKK+TLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKFTSS
Sbjct:  134 MAKIPSKKAAKAPKKAADGKKKKA-KRTESYGSYIYKVLKQVHPDTGISKRGMSIMNSFINDVFERIASEAGKLTRYNKKSTLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 250
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: A0A6U6DWX5_9STRA (Histone H2B n=4 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6DWX5_9STRA)

HSP 1 Score: 176 bits (445), Expect = 7.510e-55
Identity = 95/116 (81.90%), Postives = 108/116 (93.10%), Query Frame = 0 
Query:    1 MAKTPSKKSAKAPKKAGHKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+A APKKAG K+ + KR ESYSSYIYKV KQVHP TGISK+GMSIMNSFIND+FER+A E+GKL+++NKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    8 MAKTPSKKAA-APKKAGGKR-SRKRTESYSSYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIASEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 121
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: B8BX20_THAPS (Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 RepID=B8BX20_THAPS)

HSP 1 Score: 173 bits (439), Expect = 5.970e-54
Identity = 94/120 (78.33%), Postives = 110/120 (91.67%), Query Frame = 0 
Query:    1 MAKTPSKKS-AKAPKKAG---HKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSK++ AKA KKA     KK++ KR+ESYS+YIYKV KQVHP TGISK+GMSIMNSFIND+FER+AGE+GKL+++NKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:    1 MAKTPSKQAPAKAAKKAATGDKKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLSTYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 120
[Close]
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Match: A0A7S2P1D6_9STRA (Histone H2B n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P1D6_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.200e-53
Identity = 94/119 (78.99%), Postives = 109/119 (91.60%), Query Frame = 0 
Query:    1 MAKTPSKKS-AKAPKKA--GHKKKANKRIESYSSYIYKVRKQVHPVTGISKRGMSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAKHAVSEGTKAVTKFTSS 116
            MAKTPSKK+ +KA KK   G KK++ KR+ESYS+YIYKV KQVHP TGISK+GMSIMNSFIND+FER+AGE+GKL ++NKKATLSSRE+QTAVRLMLPGELAKHAVSEGTKAVTKF+S+
Sbjct:   35 MAKTPSKKAPSKAAKKPTDGAKKRSKKRVESYSTYIYKVLKQVHPDTGISKKGMSIMNSFINDIFERIAGEAGKLATYNKKATLSSREIQTAVRLMLPGELAKHAVSEGTKAVTKFSSA 153
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1097.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI8_ECTSI1.590e-6493.10Histone H2B n=5 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
A0A6U0X3U9_9STRA1.130e-5884.48Histone H2B n=2 Tax=Dictyochophyceae TaxID=39119 R... [more]
A0A485K2U0_9STRA8.960e-5883.90Histone H2B n=29 Tax=Stramenopiles TaxID=33634 Rep... [more]
H2B_OLILU4.420e-5781.90Histone H2B n=1 Tax=Olisthodiscus luteus TaxID=830... [more]
A0A836CJ22_9STRA1.010e-5685.59Histone H2B n=2 Tax=Tribonema minus TaxID=303371 R... [more]
B7FWR8_PHATC1.920e-5681.90Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A836CJT3_9STRA6.400e-5585.59Histone H2B n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A6U6DWX5_9STRA7.510e-5581.90Histone H2B n=4 Tax=Odontella aurita TaxID=265563 ... [more]
B8BX20_THAPS5.970e-5478.33Histone H2B n=13 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A7S2P1D6_9STRA1.200e-5378.99Histone H2B n=2 Tax=Skeletonema marinoi TaxID=2675... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 100..113
score: 92.65
coord: 29..47
score: 74.49
coord: 87..100
score: 90.61
coord: 70..87
score: 50.58
coord: 48..68
score: 67.66
IPR000558Histone H2BSMARTSM00427h2b3coord: 19..115
e-value: 1.9E-63
score: 226.8
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 3..116
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 84..106
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..116
e-value: 7.6E-51
score: 173.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 4..116
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 3..92
e-value: 1.9E-14
score: 54.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR23428:SF256HISTONE H2B.6coord: 3..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1097contigA-nodosum_M_contig1097:34265..34615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1097.2.1mRNA_A-nodosum_M_contig1097.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1097 34265..34615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1097.2.1 ID=prot_A-nodosum_M_contig1097.2.1|Name=mRNA_A-nodosum_M_contig1097.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=117bp
MAKTPSKKSAKAPKKAGHKKKANKRIESYSSYIYKVRKQVHPVTGISKRG
MSIMNSFINDVFERVAGESGKLTSFNKKATLSSREVQTAVRLMLPGELAK
HAVSEGTKAVTKFTSS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3