prot_A-nodosum_M_contig10790.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10790.6.1
Unique Nameprot_A-nodosum_M_contig10790.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length87
Homology
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BLAST of mRNA_A-nodosum_M_contig10790.6.1 vs. uniprot
Match: D7G1F5_ECTSI (Amino acid/polyamine transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F5_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 8.840e-31
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 0 
Query:    2 NFLVATGTRDLMPTVMSQILGDSHPESLWLERRVWVTAGFLLAAPLAFSRTLGALKYTATLAIGLVIFLSGMVLSFLVVPRLDACP 87
            ++LV  G  DLMPT M  ILG SHP+S+  +R VWVT GFLLAAPLAFSRTLGALKYTATLAIGLV+FL+GMV+SFLV+P LDACP
Sbjct:  145 SYLVVIG--DLMPTAMDDILGRSHPDSVLRDRHVWVTIGFLLAAPLAFSRTLGALKYTATLAIGLVVFLAGMVMSFLVLPGLDACP 228
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BLAST of mRNA_A-nodosum_M_contig10790.6.1 vs. uniprot
Match: A0A7S1TS32_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TS32_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 8.460e-13
Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = 0 
Query:    2 NFLVATGTRDLMPTVMSQILGDSHPESLWLERRVWVTAGFLLAAPLAFSRTLGALKYTATLAIGLVIFLSGMVLSFLVVPRLDAC 86
            ++L+  G  D+MP  M  ILGD  P   WL R+ W+ AG+LL  P+AF++TL ALK+T++ A+ +V+ +  M + + V P LD C
Sbjct:  206 SYLIVVG--DMMPDAMKFILGDDGPP-FWLSRQTWIVAGWLLVVPMAFAKTLDALKFTSSFAVAVVMGVVAMTILYAVDPDLDGC 287
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BLAST of mRNA_A-nodosum_M_contig10790.6.1 vs. uniprot
Match: A0A835YKE8_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE8_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 3.770e-9
Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:    2 NFLVATGTRDLMPTVMSQILGDSHPESLWLERRVWVTAGFLLAAPLAFSRTLGALKYTATLAIGLVIFLSGMVLSFLVVPRL 83
            ++L+  G  DL+P  +  +L +    +L L R  W+T   +  APLA  R+LGALKYTATLAIG   FL  MV+++  VP L
Sbjct:  110 SYLIVIG--DLLPDAVEGLLKERAAPAL-LSRHFWITTAMVWIAPLAAQRSLGALKYTATLAIGFAFFLVSMVVAYAAVPSL 188
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10790.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1F5_ECTSI8.840e-3174.42Amino acid/polyamine transporter n=2 Tax=Ectocarpu... [more]
A0A7S1TS32_9STRA8.460e-1342.35Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A835YKE8_9STRA3.770e-943.90Transmembrane amino acid transporter protein-domai... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10790contigA-nodosum_M_contig10790:12791..13921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10790.6.1mRNA_A-nodosum_M_contig10790.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10790 12791..13921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10790.6.1 ID=prot_A-nodosum_M_contig10790.6.1|Name=mRNA_A-nodosum_M_contig10790.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=87bp
FNFLVATGTRDLMPTVMSQILGDSHPESLWLERRVWVTAGFLLAAPLAFS
RTLGALKYTATLAIGLVIFLSGMVLSFLVVPRLDACP
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