prot_A-nodosum_M_contig1077.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1077.9.1
Unique Nameprot_A-nodosum_M_contig1077.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length85
Homology
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BLAST of mRNA_A-nodosum_M_contig1077.9.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 7.360e-7
Identity = 30/77 (38.96%), Postives = 42/77 (54.55%), Query Frame = 0 
Query:    2 NGQLQQRWYVSAKELQLVCVNVCVACRELETSQIVVTNYTPPHLW-----RRRDVEKHAKKITHSRLPAIRVRAITW 73
            +GQ ++RWYVS  ELQLV + VC ACR ++T  + V   TPP LW           +  K    SR+P ++   +TW
Sbjct:   22 DGQ-EKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTW 97
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1077.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNI6_9PHAE7.360e-738.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1077contigA-nodosum_M_contig1077:250114..250368 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1077.9.1mRNA_A-nodosum_M_contig1077.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1077 250112..250368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1077.9.1 ID=prot_A-nodosum_M_contig1077.9.1|Name=mRNA_A-nodosum_M_contig1077.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=85bp
RNGQLQQRWYVSAKELQLVCVNVCVACRELETSQIVVTNYTPPHLWRRRD
VEKHAKKITHSRLPAIRVRAITWKRSIDELSKKRV
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