prot_A-nodosum_M_contig1070.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1070.5.1
Unique Nameprot_A-nodosum_M_contig1070.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length83
Homology
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BLAST of mRNA_A-nodosum_M_contig1070.5.1 vs. uniprot
Match: A0A6H5K4J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J1_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.230e-11
Identity = 40/83 (48.19%), Postives = 47/83 (56.63%), Query Frame = 0 
Query:    2 VSGLILAVFLPLQVGAASLRPKKLSGNTRVLIPDG-TAPPKESKIRLAWQYSHIGLGYIAAVWGLVQCLGGLYFLDSIISDNW 83
            ++GLIL VF+ LQV AA LRP K      V    G T P   SK+R AW   H GLGYIA V  + QC GGL  +D+   D W
Sbjct:  355 MNGLILTVFIGLQVVAAVLRPSKPRAGAMVQDATGQTNPQPVSKVRRAWALLHRGLGYIAVVMAVFQCFGGLRLVDA--EDAW 435
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BLAST of mRNA_A-nodosum_M_contig1070.5.1 vs. uniprot
Match: A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.260e-11
Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = 0 
Query:    1 GVSGLILAVFLPLQVGAASLRPKKLSGNTRVLIPDGTAPPKE-SKIRLAWQYSHIGLGYIAAVWGLVQCLGGLYFLDSIISDNW 83
            G +GL+L +F+ LQV AA  RP K      +   +G A P   SK+R AW   H GLGYI   W + QCLGG+  L+  + D W
Sbjct:  443 GKAGLVLTIFVMLQVLAAVFRPSKPPAGAVIQDANGQAKPAPVSKVRQAWTLLHRGLGYITVTWAVFQCLGGIDLLE--VDDVW 524
[Close]
BLAST of mRNA_A-nodosum_M_contig1070.5.1 vs. uniprot
Match: A0A6H5JWF4_9PHAE (Cytochrome b561 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWF4_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 9.750e-9
Identity = 35/74 (47.30%), Postives = 43/74 (58.11%), Query Frame = 0 
Query:    2 VSGLILAVFLPLQVGAASLRPKKLSGNTRVLIPDGTAPPKE---SKIRLAWQYSHIGLGYIAAVWGLVQCLGGL 72
            ++GLIL VF+ LQV AA LRP K       ++ D T   K+   SK+R AW   H  LGYIA V  + QC GGL
Sbjct:  183 INGLILTVFIGLQVVAAVLRPSKPPAGA--MVQDATGQTKQQPVSKVRRAWALLHRVLGYIAVVMAVFQCFGGL 254
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1070.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K4J1_9PHAE2.230e-1148.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKV6_9PHAE2.260e-1142.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JWF4_9PHAE9.750e-947.30Cytochrome b561 domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1070contigA-nodosum_M_contig1070:118200..119333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1070.5.1mRNA_A-nodosum_M_contig1070.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1070 118200..119335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1070.5.1 ID=prot_A-nodosum_M_contig1070.5.1|Name=mRNA_A-nodosum_M_contig1070.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=83bp
GVSGLILAVFLPLQVGAASLRPKKLSGNTRVLIPDGTAPPKESKIRLAWQ
YSHIGLGYIAAVWGLVQCLGGLYFLDSIISDNW
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