prot_A-nodosum_M_contig1065.22.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1065.22.1
Unique Nameprot_A-nodosum_M_contig1065.22.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length648
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1065.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 214..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..392
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 631..648
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 555..613
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 363..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..648

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1065contigA-nodosum_M_contig1065:127898..132117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1065.22.1mRNA_A-nodosum_M_contig1065.22.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1065 127898..132118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1065.22.1 ID=prot_A-nodosum_M_contig1065.22.1|Name=mRNA_A-nodosum_M_contig1065.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=648bp
RPERSKQEGQYATSGVPPGWVRGSHTGARVAATARGAAAAAAAARNAANE
GGYEKSFPHRGQAERERMTGRPSWISNSMSAGLGGVDLAGDSAAAREPRV
FDDRFSPPAGDPSRGGMSSSSGSSSGGIFYVASDLDSSTSRGRELEQDAW
ARNQAIQTAQRHMLDRQRQRQQQRDLMALETGQVYPGTLPDQIGGGISSM
MVDQQPQSAYTLQLRQQQQQQMRLRRLHQQHQQQQHRQGFGHQLPLADHV
QHVQQQQARNHLLGDEINSFTRADGVSTAAVSSKGGGVSDVFSTTGAFSS
SAITGRPTLPFPSTPASPRNPPRQPQRHEQQLYNHNYRHRQQQQQQGLGL
GLGLEAGLGLESQRGVDSSSNHVPRVSLLSHQQPQQQPFDGVGSGSALGI
FGQQVGSVGGGSGRGADEGRGPTPSQGLGNLGPLDGLGFDPGRTMPMFGQ
AGNGGDFGSSLVDSPHEPLDPLAGQLLTGLSGVSVGQRQQQLSISGQGSA
ADYGSGLSSLNQRASAVGHGTGTLGVLGAGLGNFGDGVDHAQGVSMSRQA
QLAQLRGLVGSPQRQQQQPEAAGLFYQRQQHQQVQPNPFDFQFQPAAFQG
QFEQAHAGRNSTSTSISRAAATAAVAAVAPFGGSSSSNSGSDVNGGVR
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