prot_A-nodosum_M_contig1053.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1053.1.1
Unique Nameprot_A-nodosum_M_contig1053.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length62
Homology
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A1J3CZK1_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3CZK1_NOCCA)

HSP 1 Score: 63.9 bits (154), Expect = 8.530e-12
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEGVF 62
            ++ Y+DSD+ A +D RRS++G V       VSW S  Q+V A  T+EAEY+ALSEAVKEG++
Sbjct:    2 VEGYSDSDYAADVDRRRSITGYVFTVGGNVVSWKSNLQQVVALSTTEAEYIALSEAVKEGIW 63          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A225VGP7_9STRA (Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VGP7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.320e-11
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEGVF 62
            +KA+TDSD+ AC D RRSVSG V M     ++W SR+Q + A  T+EAEYVAL+   +E +F
Sbjct:  522 LKAFTDSDYAACEDDRRSVSGYVTMIGQCTITWSSRRQRIVAQSTAEAEYVALAHCTREVLF 583          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A4Y2I5W5_ARAVE (Uncharacterized protein n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2I5W5_ARAVE)

HSP 1 Score: 65.5 bits (158), Expect = 1.520e-11
Identity = 31/59 (52.54%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKE 59
            +K Y+D+DFGAC  T RS SG+V++    A+SWHS++Q + A+ T+EAE    SEAVKE
Sbjct:   45 LKCYSDADFGACTKTGRSPSGSVIVYTGGAISWHSQRQAIVATSTTEAEVAEASEAVKE 103          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A151JBZ3_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151JBZ3_9HYME)

HSP 1 Score: 65.9 bits (159), Expect = 2.320e-11
Identity = 31/59 (52.54%), Postives = 44/59 (74.58%), Query Frame = 0
Query:    4 YTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEGVF 62
            +TD+D+G+C   RRS +GAV + +N A+SW SRKQ   A  ++EAEY+ALS+A KE V+
Sbjct:  100 FTDADWGSCTLDRRSYTGAVFLLSNAAISWESRKQRTVALSSTEAEYIALSDAAKEAVY 158          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A2N9I1I9_FAGSY (Uncharacterized protein n=4 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9I1I9_FAGSY)

HSP 1 Score: 63.5 bits (153), Expect = 1.110e-10
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEGVF 62
            ++ YTDSDF + +D R+S+SG V      A+SW S KQ+ TA  T+EAEY+A SEA KE V+
Sbjct:   57 IQGYTDSDFQSDIDDRKSISGFVFTLGKGAISWRSCKQDTTADSTTEAEYIAASEAAKEAVW 118          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A8H5KHP2_GIBSU (Retrotransposon Ty1-copia subclass n=2 Tax=Fusarium fujikuroi species complex TaxID=171627 RepID=A0A8H5KHP2_GIBSU)

HSP 1 Score: 64.7 bits (156), Expect = 1.190e-10
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEGVF 62
            +  + DSDFG CLD+RRS +G + +  N  +SW S++Q+  A  T++AEYVA SEA KE ++
Sbjct: 1851 LVGFADSDFGGCLDSRRSTTGWIFLLGNAPISWSSQRQKTVALSTTDAEYVAASEAAKEAIW 1912          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: UPI001BC8B84E (Ty1/Copia family ribonuclease HI n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001BC8B84E)

HSP 1 Score: 62.0 bits (149), Expect = 1.580e-10
Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEGVF 62
            M  YTDSDF + +D R+S SG V +    AVSW S KQ  TA  T+EAEY+A S+A KE V+
Sbjct:    1 MDGYTDSDFQSDIDDRKSTSGYVFICNGGAVSWKSSKQSTTADSTTEAEYIAASDAAKEAVW 62          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A094GPG8_9PEZI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pseudogymnoascus sp. VKM F-4518 (FW-2643) TaxID=1420913 RepID=A0A094GPG8_9PEZI)

HSP 1 Score: 64.3 bits (155), Expect = 1.620e-10
Identity = 30/62 (48.39%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEGVF 62
            ++A+ DSD+GAC DTRRS SG ++  A   +SW S++Q   A  ++EAEY+A +EA KE V+
Sbjct:  868 LEAFVDSDWGACADTRRSTSGWLIKLAGAPISWSSKRQRTVALSSTEAEYMAATEAAKEAVW 929          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A2Z6P3B0_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P3B0_TRISU)

HSP 1 Score: 63.9 bits (154), Expect = 2.210e-10
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEG 60
            +K ++DSD+GAC DTRRS +G    P N  +SW S+KQ + +  +SEAEY AL++A  EG
Sbjct:  778 LKGFSDSDWGACPDTRRSTTGFCFYPGNSLISWKSKKQNIVSRSSSEAEYRALAQATCEG 837          
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Match: A0A0J7NDW8_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7NDW8_LASNI)

HSP 1 Score: 63.9 bits (154), Expect = 2.220e-10
Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 0
Query:    1 MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEYVALSEAVKEGVF 62
            + AY+D+D+ ACLDTR+S SG VV   +  V W SRKQ V A+ T+EAEY+A  +A KE V+
Sbjct: 1098 LVAYSDADYAACLDTRKSTSGVVVTINDGPVIWFSRKQGVIATSTTEAEYIAAHDAAKEVVW 1159          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1053.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1J3CZK1_NOCCA8.530e-1251.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A225VGP7_9STRA1.320e-1151.61Polyprotein n=1 Tax=Phytophthora megakarya TaxID=4... [more]
A0A4Y2I5W5_ARAVE1.520e-1152.54Uncharacterized protein n=1 Tax=Araneus ventricosu... [more]
A0A151JBZ3_9HYME2.320e-1152.54Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=... [more]
A0A2N9I1I9_FAGSY1.110e-1051.61Uncharacterized protein n=4 Tax=Fagus sylvatica Ta... [more]
A0A8H5KHP2_GIBSU1.190e-1046.77Retrotransposon Ty1-copia subclass n=2 Tax=Fusariu... [more]
UPI001BC8B84E1.580e-1053.23Ty1/Copia family ribonuclease HI n=1 Tax=Escherich... [more]
A0A094GPG8_9PEZI1.620e-1048.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z6P3B0_TRISU2.210e-1050.00Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A0J7NDW8_LASNI2.220e-1053.23Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 2..62
e-value: 9.35089E-26
score: 89.4497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1053contigA-nodosum_M_contig1053:6750..6935 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1053.1.1mRNA_A-nodosum_M_contig1053.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1053 6537..6935 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1053.1.1 ID=prot_A-nodosum_M_contig1053.1.1|Name=mRNA_A-nodosum_M_contig1053.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=62bp
MKAYTDSDFGACLDTRRSVSGAVVMPANVAVSWHSRKQEVTASGTSEAEY
VALSEAVKEGVF
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