prot_A-nodosum_M_contig1052.28.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1052.28.1
Unique Nameprot_A-nodosum_M_contig1052.28.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length382
Homology
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BLAST of mRNA_A-nodosum_M_contig1052.28.1 vs. uniprot
Match: A0A6H5L347_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L347_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 1.270e-84
Identity = 174/401 (43.39%), Postives = 249/401 (62.09%), Query Frame = 0 
Query:    1 MDEIIEKVRASYREHLASTERIDQHLKHLREQLGELTREAKA------ATEAGIPILDKVVGASEHDRSSDSDRECEDTL-REQEEAVYVAEAHKADLAAQVVALRHDLKVEQEEVSVLEQEQTAAAAAATSEDAIR-----------KADTSRDLENMVGVADMTDAQVDAAVHEERTSVRKNGDICGWYKAIVSNLQLVTGIQVSHRLLFGGADATFGGGVQGLELMVDLGSGQILQVTVSATDGKIRSAELCPSVDDEKSE--RRITASELAELKTAANALPSPGNLRMLVREALCRAKYAAIRSEHVRIMRRRYLVGYREAAREVTITMPVGIVVSLRLHPDYPKIAGGVEVITIAGVGGWSSSDTELLCRKVNSLALPTIMETMSGLEEAVAALDG 381
            +DEI ++  +  +   +S ER+++   HL+E++  LT + +A      +  A + I+DKV    +     ++D   E+TL RE  +A+   EA +  LA +  A+R +L ++Q EV +LE+EQ A A AA    A             +A+ SR++EN+VGVA M +A+++A   EE   VR+N  I  WY A V+ ++ + G+++SHRLLFG   A  GG V+G+E MV LGSG  ++VTVSA DGK+ SA+LC       +     I+ SEL E++ AA+ALP+P NL  LV EAL RA  AA+R EHVR +RRRYL GYR  +REVT+TM  GIV    L  DYPK+ GG EV+ + GVGGWS+ +T+ LCR+VN +ALPT+M TM  LE  V A++G
Sbjct:  107 VDEITDRALSEQQPLRSSAERVEEQAMHLQERIKGLTLQVEADPALRSSGGARLSIMDKVYAGDDRADEREADIRNEETLLREDSQALGAVEAKRTVLAERAAAVRAELLLQQREVDLLEREQHAVALAAAETAATGAGGAAAGSNGWRAEASREMENLVGVAGMPEARLEACEREEDALVRRNTGIRDWYAATVAEVENLGGVRLSHRLLFG---AGAGGRVEGMEFMVGLGSGLTMEVTVSAVDGKLSSAQLCHGQGGGGAAGFAGISPSELEEMRRAADALPAPQNLGKLVIEALSRATCAAVREEHVRQVRRRYLTGYRSPSREVTVTMGAGIVACFHLAADYPKVVGGAEVVALTGVGGWSAHETKQLCRRVNDMALPTLMATMDVLEAEVEAMEG 504
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1052.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L347_9PHAE1.270e-8443.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 19..46
NoneNo IPR availableCOILSCoilCoilcoord: 88..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1052contigA-nodosum_M_contig1052:257794..259425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1052.28.1mRNA_A-nodosum_M_contig1052.28.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1052 257036..260258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1052.28.1 ID=prot_A-nodosum_M_contig1052.28.1|Name=mRNA_A-nodosum_M_contig1052.28.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=382bp
MDEIIEKVRASYREHLASTERIDQHLKHLREQLGELTREAKAATEAGIPI
LDKVVGASEHDRSSDSDRECEDTLREQEEAVYVAEAHKADLAAQVVALRH
DLKVEQEEVSVLEQEQTAAAAAATSEDAIRKADTSRDLENMVGVADMTDA
QVDAAVHEERTSVRKNGDICGWYKAIVSNLQLVTGIQVSHRLLFGGADAT
FGGGVQGLELMVDLGSGQILQVTVSATDGKIRSAELCPSVDDEKSERRIT
ASELAELKTAANALPSPGNLRMLVREALCRAKYAAIRSEHVRIMRRRYLV
GYREAAREVTITMPVGIVVSLRLHPDYPKIAGGVEVITIAGVGGWSSSDT
ELLCRKVNSLALPTIMETMSGLEEAVAALDG*
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