prot_A-nodosum_M_contig1049.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1049.2.1
Unique Nameprot_A-nodosum_M_contig1049.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length181
Homology
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5K9K6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K6_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 3.040e-69
Identity = 116/176 (65.91%), Postives = 138/176 (78.41%), Query Frame = 0
Query:    3 ILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNL 178
            IL YLN T    ITY+RGSGL LE+Y DA YAD+   RRSV+ IAVT+ G VVSH SKTQ +VSLSTSEAEYIAAG+GVKEA+ VR VLSFIAPE SGA IKVLE+ QGA +L++NP SSARSKH+DVRFHFIR+LF++ RIS E + + EQH D++TK L R   + HR  LMN+
Sbjct:  194 ILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 369          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5L589_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L589_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 4.010e-69
Identity = 117/180 (65.00%), Postives = 147/180 (81.67%), Query Frame = 0
Query:    1 MKILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNLLE 180
            +KIL YL  T+   ITY RGSGLGLE+Y DA YAD A +RRSVS +A T+ G V+SH SKTQ +VSLS++EAEYIAAG+GVKEA+ VR VLSFIAPE SG+SI+VLE+ QGA AL++NPLSSARSKH+DVR+HFIR LFR+  IS + V+++EQH D++TK  S+++ QYHR+ LMNL E
Sbjct:  203 VKILAYLKETRDLGITYKRGSGLGLEVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGEISIKFVSTSEQHADVLTKAHSKSSLQYHRRKLMNLPE 381          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5KGI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI0_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 7.360e-68
Identity = 115/179 (64.25%), Postives = 142/179 (79.33%), Query Frame = 0
Query:    2 KILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNLLE 180
            KIL YL GT+   ITY RGSGLGL +Y DA YAD   ++RSV+ +A T+ G VVSH SKTQ ++SLS++EAEYIAAG+GVKEA+ VR VLSF+APE SG+SIKVLE+ QGA AL++NPLSS R+KH+DVR+HFI  LFR+  IS + V + EQH D++TK LSRAN QYHR+ LMNL E
Sbjct:  209 KILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDKRSVTGMATTVGGTVVSHGSKTQSILSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIHGLFRSGDISVKFVPTTEQHADLLTKALSRANLQYHRRKLMNLPE 386          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5KPN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPN5_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 1.300e-66
Identity = 114/179 (63.69%), Postives = 137/179 (76.54%), Query Frame = 0
Query:    2 KILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNLLE 180
            KIL YL GT+   ITY RGSGLGL +Y DA YAD   +RRSVS +A T+ G VVSH SKTQ +VSLS +EAEYIAA DGVKEA+ VR V SF+ PE SG+SI+VLE+ QGA AL++NPLSS R+KH+DVRFHFIR LFR+  IS + V + EQH D++TK LSRA+ QYHR+   NL E
Sbjct:   81 KILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSATEAEYIAAEDGVKEALFVRAVQSFVVPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRASLQYHRRKPTNLPE 258          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5KGX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGX6_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 2.610e-66
Identity = 117/180 (65.00%), Postives = 147/180 (81.67%), Query Frame = 0
Query:    1 MKILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNLLE 180
            +KIL YL  T+   ITY RGSGLGL +Y DA YAD A +RRSVS +A T+ G V+SH SKTQ +VSLS++EAEYIAAG+GVKEA+ VR VLSFIAPE SG+SI+VLE+ QGA AL++NPLSSARSKH+DVR+HFIR LFR+  IS + V+++EQH D++TK LS+++ QYHR+ LMNL E
Sbjct:  418 VKILAYLKETRDLGITYERGSGLGLAVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNLPE 596          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 8.180e-66
Identity = 115/177 (64.97%), Postives = 145/177 (81.92%), Query Frame = 0
Query:    1 MKILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMN 177
            +KIL YL  T+   ITY RGSGLGL +Y DA YAD A +RRSVS +A T+ G V+SH SKTQ +VSLS++EAEYIAAG+GVKEA+ VR VLSFIAPE SG+SI+VLE+ QGA AL++NPLSSARSKH+DVR+HFIR LFR+  IS + V+++EQH D++TK LS+++ QYHR+ LMN
Sbjct:  331 VKILAYLKETRDLGITYERGSGLGLAVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMN 506          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5JQH8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH8_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 8.740e-66
Identity = 114/179 (63.69%), Postives = 138/179 (77.09%), Query Frame = 0
Query:    2 KILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNLLE 180
            KIL YL GT    ITY R SGLGL +Y DA YAD   +RRS+S +A T+ G VVSH SKTQ +VSLS++EAEYIAAG+GVKEA+ VR VLSF+APE SG+SI+VLE  QGA AL++NPLSS R+KH+DVRFHFIR LFR   I+ + V + EQH D++TK LSRA+ QYHR+ LM L E
Sbjct:   75 KILVYLKGTSDLGITYQRRSGLGLAVYVDASYAD-TKDRRSMSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRDVLSFVAPEPSGSSIQVLEGNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRPGDIAVKFVPTTEQHADLLTKGLSRASLQYHRRKLMILPE 252          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5K4H5_9PHAE (CCHC-type domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H5_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 9.170e-65
Identity = 118/180 (65.56%), Postives = 148/180 (82.22%), Query Frame = 0
Query:    1 MKILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNLLE 180
            +KIL YL  T+   ITY RGSGLGLE+Y DA YAD A +RRSVS +A T+ G V+SH SKTQ +VSLS++EAEYIAAG+GVKEA+ VR VLSFIAPE SG+SI+VLE+ QGA AL++NPLSSARSKH+DVR+HFIR LFR+  IS + V+++EQH D++TK LS+++ QYHR+ LMNL E
Sbjct: 1017 VKILAYLKETRDLGITYKRGSGLGLEVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMNLPE 1195          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.350e-64
Identity = 116/178 (65.17%), Postives = 140/178 (78.65%), Query Frame = 0
Query:    1 MKILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNL 178
            ++IL YLN T    ITY+RGSGL LE+Y DA YAD+   RRSV+ IAVT+ G VVSH SKTQ +VSLSTSEAEYIAAG+GVKEA+ VR VLSFIAPE SGA IKVLE+ QGA +L++NP SSARSKH+DVRFHFIR+LF++ RIS E + + EQH D++TK L R   + HR  LMN+
Sbjct: 1067 VQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1244          
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.520e-64
Identity = 116/178 (65.17%), Postives = 140/178 (78.65%), Query Frame = 0
Query:    1 MKILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTLEGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSGASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVASAEQHTDIITKVLSRANFQYHRKHLMNL 178
            ++IL YLN T    ITY+RGSGL LE+Y DA YAD+   RRSV+ IAVT+ G VVSH SKTQ +VSLSTSEAEYIAAG+GVKEA+ VR VLSFIAPE SGA IKVLE+ QGA +L++NP SSARSKH+DVRFHFIR+LF++ RIS E + + EQH D++TK L R   + HR  LMN+
Sbjct: 1620 VQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1797          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1049.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9K6_9PHAE3.040e-6965.91Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L589_9PHAE4.010e-6965.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGI0_9PHAE7.360e-6864.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPN5_9PHAE1.300e-6663.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGX6_9PHAE2.610e-6665.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG0_9PHAE8.180e-6664.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQH8_9PHAE8.740e-6663.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4H5_9PHAE9.170e-6565.56CCHC-type domain-containing protein n=11 Tax=Ectoc... [more]
A0A6H5JKS3_9PHAE1.350e-6465.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE1.520e-6465.17Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 26..165
e-value: 1.12775E-40
score: 132.207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1049contigA-nodosum_M_contig1049:35289..35831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1049.2.1mRNA_A-nodosum_M_contig1049.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1049 33721..36511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1049.2.1 ID=prot_A-nodosum_M_contig1049.2.1|Name=mRNA_A-nodosum_M_contig1049.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=181bp
MKILWYLNGTKSFVITYLRGSGLGLEMYTDADYADKANNRRSVSRIAVTL
EGAVVSHPSKTQHVVSLSTSEAEYIAAGDGVKEAMLVRTVLSFIAPEMSG
ASIKVLENIQGAKALIENPLSSARSKHVDVRFHFIRDLFRTRRISEECVA
SAEQHTDIITKVLSRANFQYHRKHLMNLLE*
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